Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

LCN9 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 392399 lipocalin 9 chr9 + 138550167 - 138555667 138555167 Transcription Factor Binding Sites   Download all TFBS in the LCN9 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints TEAD1_TEA_full_monomeric_10_1 SELEX - 138553866 138553875 6.0E-06 TACATTCCAC 10 POU6F2_POU_DBD_dimeric_16_1 SELEX + 138554722 138554737 6.0E-06 ATAAGGAGCGAATAAG 16 POU6F2_POU_DBD_dimeric_16_1 SELEX - 138554722 138554737 6.0E-06 CTTATTCGCTCCTTAT 16 TEAD3_TEA_DBD_monomeric_8_1 SELEX - 138553867 138553874 1.0E-05 ACATTCCA 8 TEAD4_TEA_DBD_monomeric_10_1 SELEX - 138553866 138553875 8.0E-06 TACATTCCAC 10 V_DMRT4_01_M01149 TRANSFAC - 138553853 138553865 7.0E-06 AATGTAACATGAT 13 V_DMRT3_01_M01148 TRANSFAC + 138553853 138553867 5.0E-06 ATCATGTTACATTGT 15 V_MAF_Q6_M00648 TRANSFAC - 138553894 138553909 7.0E-06 TGGAGGGATGTTTTGG 16 V_BACH1_01_M00495 TRANSFAC - 138554766 138554780 8.0E-06 ATGGTGAGTCACAGC 15 V_SOX13_03_M02797 TRANSFAC - 138553883 138553898 8.0E-06 TTTGGAACAATGTGCA 16 V_JUNDM2_04_M02876 TRANSFAC - 138554766 138554781 1.0E-06 AATGGTGAGTCACAGC 16 V_MAFK_Q3_M02022 TRANSFAC + 138554770 138554780 9.0E-06 TGACTCACCAT 11 V_TEF1_Q6_03_M01817 TRANSFAC + 138553866 138553874 6.0E-06 GTGGAATGT 9 V_DMRT7_01_M01151 TRANSFAC + 138553856 138553869 0.0E+00 ATGTTACATTGTGG 14 V_DMRT2_01_M01147 TRANSFAC + 138553852 138553867 5.0E-06 CATCATGTTACATTGT 16 V_SRY_05_M02917 TRANSFAC - 138553883 138553899 7.0E-06 TTTTGGAACAATGTGCA 17 V_DMRT1_01_M01146 TRANSFAC + 138553856 138553870 2.0E-06 ATGTTACATTGTGGA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.