Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

FAM221B Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 392307 family with sequence similarity 221, member B chr9 - 35828244 - 35833744 35828744 Transcription Factor Binding Sites   Download all TFBS in the FAM221B promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints RXRG_nuclearreceptor_full_dimeric_14_2 SELEX - 35828493 35828506 7.0E-06 AAGGTCTTGACCTA 14 LBX2_homeodomain_DBD_dimeric_13_1 SELEX - 35826699 35826711 2.0E-06 CTGGAAGTAGTTA 13 CTCF_MA0139.1 JASPAR - 35826150 35826168 0.0E+00 CTACCACTAGATGGAAGCA 19 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 35829211 35829221 1.0E-05 GCCCCGCCCCC 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 35829424 35829434 1.0E-05 GCCCCGCCCCC 11 FOXA1_MA0148.1 JASPAR + 35829670 35829680 6.0E-06 TGTTTGCTTAA 11 TBX1_TBX_DBD_dimeric_23_1 SELEX + 35827788 35827810 5.0E-06 TATCACTCCTTAAATGCATCAGA 23 Tp53_p53l_DBD_dimeric_18_2 SELEX + 35824331 35824348 5.0E-06 GGCATGTTTTTGCAAGTT 18 Tp53_p53l_DBD_dimeric_18_2 SELEX - 35824331 35824348 8.0E-06 AACTTGCAAAAACATGCC 18 Mafb_bZIP_DBD_monomeric_12_1 SELEX - 35827701 35827712 2.0E-06 AAAATGATGACA 12 Tp73_p53l_DBD_dimeric_18_1 SELEX - 35824331 35824348 9.0E-06 AACTTGCAAAAACATGCC 18 POU2F2_POU_DBD_monomeric_11_1 SELEX - 35824292 35824302 3.0E-06 TTATGGAAATT 11 Creb5_bZIP_DBD_dimeric_12_1 SELEX + 35826673 35826684 6.0E-06 AATGATGTCATT 12 Creb5_bZIP_DBD_dimeric_12_1 SELEX - 35826673 35826684 3.0E-06 AATGACATCATT 12 SRF_MA0083.1 JASPAR + 35826348 35826359 7.0E-06 GACCTCATATGG 12 JDP2_bZIP_full_dimeric_12_1 SELEX - 35826673 35826684 8.0E-06 AATGACATCATT 12 TEAD1_TEA_full_monomeric_10_1 SELEX + 35827639 35827648 5.0E-06 AACATTCCAT 10 POU6F2_POU_DBD_dimeric_16_1 SELEX + 35826671 35826686 8.0E-06 TTAATGATGTCATTCA 16 POU6F2_POU_DBD_dimeric_16_1 SELEX - 35826671 35826686 4.0E-06 TGAATGACATCATTAA 16 ESR1_MA0112.2 JASPAR - 35824248 35824267 3.0E-06 TAAGAGGGCCACCCTGACCT 20 OTX2_homeodomain_DBD_monomeric_8_1 SELEX - 35827661 35827668 7.0E-06 TTAATCCT 8 SP1_MA0079.2 JASPAR + 35829425 35829434 7.0E-06 CCCCGCCCCC 10 ESR1_nuclearreceptor_DBD_dimeric_17_1 SELEX + 35824247 35824263 5.0E-06 CAGGTCAGGGTGGCCCT 17 ESR1_nuclearreceptor_DBD_dimeric_17_1 SELEX - 35824247 35824263 5.0E-06 AGGGCCACCCTGACCTG 17 ZNF143_C2H2_DBD_monomeric_16_1 SELEX - 35826236 35826251 3.0E-06 ATTCCATAATGCACTG 16 POU3F1_POU_DBD_monomeric_12_1 SELEX - 35824291 35824302 4.0E-06 TTATGGAAATTC 12 TEAD3_TEA_DBD_monomeric_8_1 SELEX + 35827640 35827647 1.0E-05 ACATTCCA 8 PITX1_homeodomain_full_monomeric_9_1 SELEX - 35827661 35827669 9.0E-06 CTTAATCCT 9 DUXA_homeodomain_DBD_dimeric_13_1 SELEX + 35827579 35827591 8.0E-06 CTGACCCAATCAG 13 Pou5f1_MA0142.1 JASPAR - 35824293 35824307 2.0E-06 CTGTGTTATGGAAAT 15 POU2F1_POU_DBD_monomeric_12_1 SELEX - 35824292 35824303 5.0E-06 GTTATGGAAATT 12 TEAD4_TEA_DBD_monomeric_10_1 SELEX - 35826245 35826254 8.0E-06 CAAATTCCAT 10 TEAD4_TEA_DBD_monomeric_10_1 SELEX + 35827639 35827648 1.0E-06 AACATTCCAT 10 IRF5_IRF_full_dimeric_14_1 SELEX - 35829884 35829897 6.0E-06 CTGAAACCCAGACT 14 TP53_MA0106.1 JASPAR + 35824308 35824327 4.0E-06 GTAGGCATGCTCATGCATAG 20 POU3F2_POU_DBD_monomeric_12_1 SELEX - 35824291 35824302 4.0E-06 TTATGGAAATTC 12 Sox2_MA0143.1 JASPAR - 35824294 35824308 7.0E-06 CCTGTGTTATGGAAA 15 TBX1_TBX_DBD_dimeric_20_1 SELEX - 35826723 35826742 3.0E-06 AAATGTGAATTTAGGAGTCA 20 Zfx_MA0146.1 JASPAR + 35829290 35829303 4.0E-06 GTCGCCCAGGCCTG 14 V_MEQ_01_M02049 TRANSFAC - 35828906 35828914 7.0E-06 AACACACAC 9 V_CEBPG_Q6_M00622 TRANSFAC + 35828887 35828899 8.0E-06 TTTACTTCTGAAA 13 V_ER_Q6_02_M00959 TRANSFAC + 35824247 35824257 5.0E-06 CAGGTCAGGGT 11 V_ELK1_04_M01165 TRANSFAC - 35826703 35826713 9.0E-06 AACTGGAAGTA 11 V_ZFP187_03_M02830 TRANSFAC + 35826712 35826725 3.0E-06 TTGTGTACCAATGA 14 V_OBOX5_05_M03066 TRANSFAC + 35827657 35827673 6.0E-06 CTAAAGGATTAAGTCCA 17 V_DUXL_01_M01390 TRANSFAC + 35827580 35827596 9.0E-06 TGACCCAATCAGGATCT 17 V_BTEB3_Q5_M01865 TRANSFAC - 35826662 35826674 1.0E-05 TTAAGGGAGGAGG 13 V_MAFK_03_M02776 TRANSFAC - 35827700 35827714 5.0E-06 TGAAAATGATGACAG 15 V_XPF1_Q6_M00684 TRANSFAC + 35826466 35826475 4.0E-06 TCTGAACAAC 10 V_ESR1_01_M02261 TRANSFAC - 35824248 35824267 3.0E-06 TAAGAGGGCCACCCTGACCT 20 V_SREBP2_Q6_M01177 TRANSFAC + 35829354 35829365 3.0E-06 AGGCCACCCCCC 12 V_POU5F1_02_M02245 TRANSFAC - 35824293 35824307 2.0E-06 CTGTGTTATGGAAAT 15 V_SPDEF_04_M02915 TRANSFAC - 35827556 35827571 4.0E-06 GACTACATCCTTGCAG 16 V_MAFB_03_M02879 TRANSFAC - 35824334 35824348 0.0E+00 AACTTGCAAAAACAT 15 V_SP1_Q6_01_M00931 TRANSFAC + 35829212 35829221 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 35829424 35829433 4.0E-06 GGGGCGGGGC 10 V_OCT1_01_M00135 TRANSFAC - 35824288 35824306 9.0E-06 TGTGTTATGGAAATTCATG 19 V_SP1_03_M02281 TRANSFAC + 35829425 35829434 7.0E-06 CCCCGCCCCC 10 V_STAT6_01_M00494 TRANSFAC - 35826193 35826200 7.0E-06 TATTTCCA 8 V_JUNDM2_03_M02772 TRANSFAC - 35826671 35826686 6.0E-06 TGAATGACATCATTAA 16 V_HFH4_01_M00742 TRANSFAC + 35829667 35829679 1.0E-06 CAGTGTTTGCTTA 13 V_PPAR_DR1_Q2_M00763 TRANSFAC - 35824427 35824439 1.0E-05 AGACCTGTGTCCT 13 V_SP1_02_M01303 TRANSFAC - 35829324 35829334 8.0E-06 GGGGCGGGGGC 11 V_SP1_02_M01303 TRANSFAC + 35829367 35829377 5.0E-06 GGGGTGGGGAG 11 V_SP1_02_M01303 TRANSFAC - 35829429 35829439 8.0E-06 GGGGCGGGGGC 11 V_AP4_Q6_02_M01860 TRANSFAC + 35829894 35829906 1.0E-05 TCAGCTGCCGCCA 13 V_NFAT2_01_M01748 TRANSFAC - 35824292 35824300 5.0E-06 ATGGAAATT 9 V_HELIOSA_01_M01003 TRANSFAC - 35824275 35824285 1.0E-06 TATAGGGATTA 11 V_PAX_Q6_M00808 TRANSFAC + 35826385 35826395 4.0E-06 CTGGAACTTAA 11 V_AP1_Q6_M00174 TRANSFAC + 35827646 35827656 5.0E-06 CATGACTCAGT 11 V_WT1_Q6_01_M02036 TRANSFAC - 35829104 35829113 4.0E-06 CGCCCCCGCC 10 V_WT1_Q6_01_M02036 TRANSFAC - 35829168 35829177 4.0E-06 CGCCCCCGCC 10 V_WT1_Q6_01_M02036 TRANSFAC + 35829428 35829437 4.0E-06 CGCCCCCGCC 10 V_RPC155_01_M01798 TRANSFAC + 35826409 35826424 1.0E-05 GAAGTAGTTCGAATCC 16 V_GC_01_M00255 TRANSFAC + 35829210 35829223 8.0E-06 GGGGGGCGGGGCGT 14 V_GC_01_M00255 TRANSFAC - 35829422 35829435 8.0E-06 CGGGGGCGGGGCCG 14 V_OBOX5_02_M01480 TRANSFAC + 35827657 35827673 6.0E-06 CTAAAGGATTAAGTCCA 17 V_STAF_01_M00262 TRANSFAC - 35826232 35826253 1.0E-06 AAATTCCATAATGCACTGCGAA 22 V_TEF_Q6_M00672 TRANSFAC + 35824334 35824345 8.0E-06 ATGTTTTTGCAA 12 V_KROX_Q6_M00982 TRANSFAC - 35829102 35829115 1.0E-06 TCCGCCCCCGCCTC 14 V_KROX_Q6_M00982 TRANSFAC - 35829166 35829179 3.0E-06 CCCGCCCCCGCCCT 14 V_KROX_Q6_M00982 TRANSFAC + 35829426 35829439 0.0E+00 CCCGCCCCCGCCCC 14 V_KROX_Q6_M00982 TRANSFAC + 35829504 35829517 3.0E-06 CCCGCCCTCGCCCC 14 V_P53_03_M01651 TRANSFAC + 35824330 35824349 2.0E-06 TGGCATGTTTTTGCAAGTTC 20 V_P53_03_M01651 TRANSFAC - 35824330 35824349 2.0E-06 GAACTTGCAAAAACATGCCA 20 V_PXRRXR_02_M01153 TRANSFAC - 35826298 35826305 1.0E-05 AGAGTTCA 8 V_AP1_Q6_01_M00925 TRANSFAC + 35827647 35827655 7.0E-06 ATGACTCAG 9 V_SP1_Q6_M00196 TRANSFAC + 35829210 35829222 1.0E-06 GGGGGGCGGGGCG 13 V_SP1_Q6_M00196 TRANSFAC - 35829423 35829435 1.0E-06 CGGGGGCGGGGCC 13 V_MAZ_Q6_01_M02023 TRANSFAC + 35829366 35829379 6.0E-06 GGGGGTGGGGAGCG 14 V_HNF3_Q6_M00791 TRANSFAC - 35829668 35829680 4.0E-06 TTAAGCAAACACT 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 35829670 35829680 2.0E-06 TGTTTGCTTAA 11 V_EGR1_Q6_M01873 TRANSFAC + 35829105 35829114 4.0E-06 GCGGGGGCGG 10 V_EGR1_Q6_M01873 TRANSFAC + 35829169 35829178 4.0E-06 GCGGGGGCGG 10 V_EGR1_Q6_M01873 TRANSFAC - 35829427 35829436 4.0E-06 GCGGGGGCGG 10 V_DUXBL_01_M02968 TRANSFAC + 35827580 35827596 9.0E-06 TGACCCAATCAGGATCT 17 V_IRF3_06_M02871 TRANSFAC - 35826748 35826761 5.0E-06 TGAAAAAGGTCTGA 14 V_ZIC3_05_M02941 TRANSFAC + 35824354 35824368 6.0E-06 GTACGCAGCATGCCA 15 V_ZIC3_05_M02941 TRANSFAC + 35829131 35829145 7.0E-06 AAGCCCAGCAGGACT 15 V_AP1_C_M00199 TRANSFAC + 35827647 35827655 6.0E-06 ATGACTCAG 9 V_CTCF_02_M01259 TRANSFAC - 35826152 35826171 0.0E+00 GTTCTACCACTAGATGGAAG 20 V_CTCF_01_M01200 TRANSFAC - 35826150 35826169 1.0E-06 TCTACCACTAGATGGAAGCA 20 V_BLIMP1_Q6_M01066 TRANSFAC - 35826729 35826744 7.0E-06 AGAAATGTGAATTTAG 16 V_HNF4A_02_M02868 TRANSFAC + 35827662 35827677 6.0E-06 GGATTAAGTCCAAATT 16 V_IRF7_01_M00453 TRANSFAC - 35826728 35826745 4.0E-06 TAGAAATGTGAATTTAGG 18 V_GATA4_Q3_M00632 TRANSFAC + 35826277 35826288 8.0E-06 AGATATAAGAGG 12 V_GATA4_Q3_M00632 TRANSFAC + 35826279 35826290 6.0E-06 ATATAAGAGGGA 12 V_SP4_Q5_M01273 TRANSFAC + 35829424 35829434 1.0E-06 GCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC + 35829430 35829440 7.0E-06 CCCCCGCCCCG 11 V_OTX2_Q3_M01719 TRANSFAC + 35827658 35827670 2.0E-06 TAAAGGATTAAGT 13 V_AP1_Q4_01_M00926 TRANSFAC - 35827647 35827654 1.0E-05 TGAGTCAT 8 V_VJUN_01_M00036 TRANSFAC + 35826671 35826686 3.0E-06 TTAATGATGTCATTCA 16 V_PKNOX2_01_M01411 TRANSFAC + 35827694 35827709 6.0E-06 CAAGGCCTGTCATCAT 16 V_CEBPA_01_M00116 TRANSFAC - 35824335 35824348 9.0E-06 AACTTGCAAAAACA 14 V_PARP_Q3_M01211 TRANSFAC + 35826192 35826201 2.0E-06 TTGGAAATAG 10 V_ZBTB4_04_M02929 TRANSFAC + 35827613 35827628 3.0E-06 CAACAACTGGCACTTT 16 V_ZBTB4_04_M02929 TRANSFAC - 35829660 35829675 7.0E-06 CAAACACTGGGAATGG 16 V_BDP1_01_M01796 TRANSFAC - 35826413 35826424 2.0E-06 GGATTCGAACTA 12 V_FRA1_Q5_M01267 TRANSFAC - 35827647 35827654 1.0E-05 TGAGTCAT 8 V_TCF4_Q5_M00671 TRANSFAC + 35826089 35826096 1.0E-05 CCTTTGAA 8 V_MYB_Q3_M00773 TRANSFAC - 35827616 35827626 4.0E-06 AGTGCCAGTTG 11 V_ASCL2_04_M02841 TRANSFAC + 35829649 35829664 5.0E-06 CTGTCCCAGCCCCATT 16 V_P53_05_M01655 TRANSFAC + 35824330 35824349 2.0E-06 TGGCATGTTTTTGCAAGTTC 20 V_FOX_Q2_M00809 TRANSFAC + 35829667 35829679 5.0E-06 CAGTGTTTGCTTA 13 V_ETS1_B_M00339 TRANSFAC - 35826652 35826666 6.0E-06 GGAGGATGTGTGTGG 15 V_EGR1_06_M02744 TRANSFAC - 35829166 35829179 8.0E-06 CCCGCCCCCGCCCT 14 V_OCT1_07_M00248 TRANSFAC - 35824292 35824303 2.0E-06 GTTATGGAAATT 12 V_P63_01_M01656 TRANSFAC - 35824330 35824349 6.0E-06 GAACTTGCAAAAACATGCCA 20 V_SOX2_01_M02246 TRANSFAC - 35824294 35824308 7.0E-06 CCTGTGTTATGGAAA 15 V_ZIC3_04_M02837 TRANSFAC - 35829358 35829372 1.0E-06 CACCCCCGGGGGGTG 15 V_ZIC3_04_M02837 TRANSFAC + 35829359 35829373 2.0E-06 ACCCCCCGGGGGTGG 15 V_ZIC3_04_M02837 TRANSFAC - 35829359 35829373 8.0E-06 CCACCCCCGGGGGGT 15 V_ZIC1_04_M02835 TRANSFAC - 35829359 35829372 0.0E+00 CACCCCCGGGGGGT 14 V_SIX6_08_M02897 TRANSFAC - 35827534 35827550 9.0E-06 ATTAGGTATATCCCCCT 17 V_RFX3_05_M02892 TRANSFAC + 35824400 35824422 3.0E-06 GCTGAGGCTTGGAAACAGCAGGG 23 V_PPARG_02_M00515 TRANSFAC + 35824244 35824266 0.0E+00 TAGCAGGTCAGGGTGGCCCTCTT 23 V_FREAC4_01_M00292 TRANSFAC - 35829666 35829681 6.0E-06 CTTAAGCAAACACTGG 16 V_SP1_Q2_01_M00933 TRANSFAC - 35829211 35829220 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC + 35829425 35829434 4.0E-06 CCCCGCCCCC 10 V_UF1H3BETA_Q6_M01068 TRANSFAC - 35829424 35829437 2.0E-06 GGCGGGGGCGGGGC 14 V_SP1_Q4_01_M00932 TRANSFAC + 35829210 35829222 2.0E-06 GGGGGGCGGGGCG 13 V_SP1_Q4_01_M00932 TRANSFAC - 35829423 35829435 1.0E-06 CGGGGGCGGGGCC 13 V_ELK1_03_M01163 TRANSFAC - 35826703 35826713 4.0E-06 AACTGGAAGTA 11 V_OBOX5_01_M01381 TRANSFAC + 35827657 35827673 8.0E-06 CTAAAGGATTAAGTCCA 17 V_SOX5_04_M02910 TRANSFAC - 35826668 35826682 9.0E-06 TGACATCATTAAGGG 15 V_BRF1_01_M01747 TRANSFAC + 35826413 35826425 1.0E-06 TAGTTCGAATCCC 13 V_COUP_DR1_Q6_M00765 TRANSFAC - 35824427 35824439 9.0E-06 AGACCTGTGTCCT 13 V_ZIC2_04_M02836 TRANSFAC - 35829358 35829372 1.0E-06 CACCCCCGGGGGGTG 15 V_ZIC2_04_M02836 TRANSFAC + 35829359 35829373 1.0E-06 ACCCCCCGGGGGTGG 15 V_ZIC2_04_M02836 TRANSFAC - 35829359 35829373 5.0E-06 CCACCCCCGGGGGGT 15 V_OBOX6_06_M03067 TRANSFAC - 35827657 35827673 8.0E-06 TGGACTTAATCCTTTAG 17 V_PAX4_04_M00380 TRANSFAC - 35827525 35827554 0.0E+00 ATAAATTAGGTATATCCCCCTCCCCACCGT 30 V_OCT4_01_M01125 TRANSFAC - 35824293 35824307 4.0E-06 CTGTGTTATGGAAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.