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LAMA3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 3909 laminin, alpha 3 chr18 + 21264561 - 21270061 21269561 Transcription Factor Binding Sites   Download all TFBS in the LAMA3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 21264673 21264690 1.0E-06 CTAGCAAATATTAACTTT 18 Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX + 21273995 21274008 9.0E-06 GAGGTCATAGGACA 14 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 21264770 21264781 6.0E-06 TTTAAAAATAAC 12 RXRG_nuclearreceptor_full_dimeric_14_1 SELEX + 21273995 21274008 4.0E-06 GAGGTCATAGGACA 14 NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX + 21273995 21274008 9.0E-06 GAGGTCATAGGACA 14 TBX19_TBX_DBD_dimeric_20_1 SELEX - 21265084 21265103 6.0E-06 ATTAACATGTAAAAGTGAAA 20 CUX1_CUT_DBD_dimeric_17_1 SELEX - 21269102 21269118 5.0E-06 ATCAAAGACATTTCGAT 17 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 21264770 21264781 3.0E-06 TTTAAAAATAAC 12 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 21264675 21264688 1.0E-06 AGCAAATATTAACT 14 FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 21264675 21264688 1.0E-06 AGTTAATATTTGCT 14 IRF1_MA0050.1 JASPAR - 21265082 21265093 0.0E+00 AAAAGTGAAAGC 12 Tcfcp2l1_MA0145.1 JASPAR - 21270184 21270197 8.0E-06 CCAGCCCGAACCTG 14 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 21264675 21264688 3.0E-06 AGCAAATATTAACT 14 FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 21264675 21264688 0.0E+00 AGTTAATATTTGCT 14 MEF2A_MA0052.1 JASPAR + 21264771 21264780 7.0E-06 TTATTTTTAA 10 FOXI1_MA0042.1 JASPAR + 21264630 21264641 4.0E-06 GGATGTTTGGTT 12 FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 21264675 21264688 2.0E-06 AGCAAATATTAACT 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 21264675 21264688 1.0E-06 AGTTAATATTTGCT 14 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 21265080 21265094 0.0E+00 TAAAAGTGAAAGCAA 15 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 21264675 21264688 3.0E-06 AGCAAATATTAACT 14 FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 21264675 21264688 2.0E-06 AGTTAATATTTGCT 14 Pou5f1_MA0142.1 JASPAR + 21265089 21265103 3.0E-06 CTTTTACATGTTAAT 15 Pou5f1_MA0142.1 JASPAR - 21265090 21265104 3.0E-06 TATTAACATGTAAAA 15 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX + 21273995 21274008 1.0E-05 GAGGTCATAGGACA 14 Irx3_homeodomain_DBD_dimeric_12_1 SELEX - 21265090 21265101 2.0E-06 TAACATGTAAAA 12 HNF1A_MA0046.1 JASPAR - 21264675 21264688 2.0E-06 AGTTAATATTTGCT 14 IRF2_MA0051.1 JASPAR - 21265077 21265094 0.0E+00 TAAAAGTGAAAGCAAAGT 18 V_DBX1_01_M01483 TRANSFAC - 21265093 21265109 8.0E-06 TATTTTATTAACATGTA 17 V_LEF1_04_M02774 TRANSFAC + 21269107 21269123 3.0E-06 AATGTCTTTGATGTGAG 17 V_MEQCJUN_02_M02048 TRANSFAC + 21273992 21274002 1.0E-06 AATGAGGTCAT 11 V_E2F4_Q6_M02090 TRANSFAC + 21269375 21269384 1.0E-05 GCGGGAGAGA 10 V_BCL6_01_M01183 TRANSFAC + 21264694 21264709 9.0E-06 TATGAAGCTTTTATTT 16 V_ETS_B_M00340 TRANSFAC - 21264619 21264632 9.0E-06 TCCAGGAAACAACT 14 V_MMEF2_Q6_M00405 TRANSFAC - 21264769 21264784 0.0E+00 CAGTTTAAAAATAACT 16 V_POU5F1_02_M02245 TRANSFAC + 21265089 21265103 3.0E-06 CTTTTACATGTTAAT 15 V_POU5F1_02_M02245 TRANSFAC - 21265090 21265104 3.0E-06 TATTAACATGTAAAA 15 V_HOXA13_02_M01297 TRANSFAC - 21264701 21264709 9.0E-06 AAATAAAAG 9 V_MEF2_02_M00231 TRANSFAC - 21264766 21264787 1.0E-06 TTGCAGTTTAAAAATAACTTTG 22 V_IRF_Q6_01_M00972 TRANSFAC - 21265083 21265093 0.0E+00 AAAAGTGAAAG 11 V_IRF2_Q6_M01882 TRANSFAC - 21265080 21265095 0.0E+00 GTAAAAGTGAAAGCAA 16 V_POU2F3_01_M01476 TRANSFAC + 21265092 21265107 7.0E-06 TTACATGTTAATAAAA 16 V_FOXO3A_Q1_M01137 TRANSFAC - 21264768 21264779 3.0E-06 TAAAAATAACTT 12 V_PPAR_DR1_Q2_M00763 TRANSFAC - 21273996 21274008 9.0E-06 TGTCCTATGACCT 13 V_MEF2A_Q6_M02024 TRANSFAC + 21264772 21264781 1.0E-06 TATTTTTAAA 10 V_CDP_04_M01344 TRANSFAC - 21264706 21264720 9.0E-06 TAAAGATGATCAAAT 15 V_HNF6_Q6_M00639 TRANSFAC + 21264796 21264807 6.0E-06 TGAAGTCAATGA 12 V_ELF4_04_M02850 TRANSFAC - 21264697 21264713 2.0E-06 GATCAAATAAAAGCTTC 17 V_ELF4_04_M02850 TRANSFAC - 21264767 21264783 4.0E-06 AGTTTAAAAATAACTTT 17 V_TCF3_04_M02816 TRANSFAC - 21269107 21269123 3.0E-06 CTCACATCAAAGACATT 17 V_OCT1_03_M00137 TRANSFAC - 21264571 21264583 1.0E-05 TGAGTAATGAGAA 13 V_GATA3_05_M02859 TRANSFAC - 21264987 21265008 1.0E-05 ATGTTCTGATGCTATCAGAAAC 22 V_HNF1_Q6_M00790 TRANSFAC - 21264672 21264689 1.0E-06 AAGTTAATATTTGCTAGT 18 V_PAX9_B_M00329 TRANSFAC - 21264572 21264595 7.0E-06 GAGATATAAAGATGAGTAATGAGA 24 V_DOBOX4_01_M01359 TRANSFAC + 21274010 21274026 1.0E-06 TGATTAGATCCCTCATG 17 V_IRF2_01_M00063 TRANSFAC - 21265082 21265094 1.0E-06 TAAAAGTGAAAGC 13 V_RSRFC4_Q2_M00407 TRANSFAC - 21264767 21264783 0.0E+00 AGTTTAAAAATAACTTT 17 V_IRX4_01_M01410 TRANSFAC - 21265088 21265104 0.0E+00 TATTAACATGTAAAAGT 17 V_IRX4_01_M01410 TRANSFAC + 21265089 21265105 1.0E-06 CTTTTACATGTTAATAA 17 V_AMEF2_Q6_M00403 TRANSFAC - 21264767 21264784 0.0E+00 CAGTTTAAAAATAACTTT 18 V_IRF3_Q3_M01279 TRANSFAC + 21265080 21265092 2.0E-06 TTGCTTTCACTTT 13 V_IRF_Q6_M00772 TRANSFAC + 21265079 21265093 0.0E+00 TTTGCTTTCACTTTT 15 V_HNF1_Q6_01_M01011 TRANSFAC + 21264671 21264691 0.0E+00 TACTAGCAAATATTAACTTTA 21 V_HNF1_Q6_01_M01011 TRANSFAC - 21264766 21264786 5.0E-06 TGCAGTTTAAAAATAACTTTG 21 V_MEF2_03_M00232 TRANSFAC - 21264766 21264787 7.0E-06 TTGCAGTTTAAAAATAACTTTG 22 V_CUX1_04_M02959 TRANSFAC - 21264706 21264720 9.0E-06 TAAAGATGATCAAAT 15 V_OCT1_04_M00138 TRANSFAC + 21265088 21265110 1.0E-05 ACTTTTACATGTTAATAAAATAG 23 V_TCF7_03_M02817 TRANSFAC - 21269107 21269123 2.0E-06 CTCACATCAAAGACATT 17 V_MEF2_Q6_01_M00941 TRANSFAC + 21264769 21264780 0.0E+00 AGTTATTTTTAA 12 V_CDC5_01_M00478 TRANSFAC - 21264771 21264782 1.0E-05 GTTTAAAAATAA 12 V_NKX3A_01_M00451 TRANSFAC - 21264741 21264752 8.0E-06 CATTAAGTGTAT 12 V_IRX3_01_M01318 TRANSFAC - 21265088 21265104 0.0E+00 TATTAACATGTAAAAGT 17 V_IRX3_01_M01318 TRANSFAC + 21265089 21265105 2.0E-06 CTTTTACATGTTAATAA 17 V_MZF1_02_M00084 TRANSFAC + 21270196 21270208 9.0E-06 GGTGGAGGGGAAA 13 V_IRX5_01_M01472 TRANSFAC - 21265088 21265104 0.0E+00 TATTAACATGTAAAAGT 17 V_IRX5_01_M01472 TRANSFAC + 21265089 21265105 2.0E-06 CTTTTACATGTTAATAA 17 V_ICSBP_Q6_M00699 TRANSFAC - 21265081 21265092 4.0E-06 AAAGTGAAAGCA 12 V_SOX17_04_M02904 TRANSFAC - 21273984 21274000 2.0E-06 GACCTCATTCAAACAGT 17 V_IRF7_01_M00453 TRANSFAC + 21269096 21269113 4.0E-06 TGGGAAATCGAAATGTCT 18 V_PTF1BETA_Q6_M00657 TRANSFAC - 21274080 21274093 3.0E-06 GAGAAACTGGCAGG 14 V_IRX3_02_M01485 TRANSFAC - 21265088 21265104 0.0E+00 TATTAACATGTAAAAGT 17 V_IRX3_02_M01485 TRANSFAC + 21265089 21265105 4.0E-06 CTTTTACATGTTAATAA 17 V_VJUN_01_M00036 TRANSFAC - 21273990 21274005 5.0E-06 CCTATGACCTCATTCA 16 V_T3R_01_M00239 TRANSFAC + 21273991 21274006 3.0E-06 GAATGAGGTCATAGGA 16 V_OCT2_01_M01368 TRANSFAC + 21265092 21265107 5.0E-06 TTACATGTTAATAAAA 16 V_HNF1_01_M00132 TRANSFAC - 21264674 21264688 0.0E+00 AGTTAATATTTGCTA 15 V_DR1_Q3_M00762 TRANSFAC + 21273996 21274008 7.0E-06 AGGTCATAGGACA 13 NR1H2_RXRA_MA0115.1 JASPAR + 21273994 21274010 2.0E-06 TGAGGTCATAGGACACT 17 V_CPHX_01_M01478 TRANSFAC + 21264991 21265004 4.0E-06 CTGATAGCATCAGA 14 V_RSRFC4_01_M00026 TRANSFAC + 21264768 21264783 1.0E-06 AAGTTATTTTTAAACT 16 V_RSRFC4_01_M00026 TRANSFAC - 21264768 21264783 7.0E-06 AGTTTAAAAATAACTT 16 V_OCT1_06_M00162 TRANSFAC + 21265087 21265100 6.0E-06 CACTTTTACATGTT 14 V_IRX2_01_M01405 TRANSFAC - 21265088 21265104 0.0E+00 TATTAACATGTAAAAGT 17 V_IRX2_01_M01405 TRANSFAC + 21265089 21265105 2.0E-06 CTTTTACATGTTAATAA 17 V_IRF1_Q6_01_M01881 TRANSFAC + 21265081 21265094 0.0E+00 TGCTTTCACTTTTA 14 V_SRF_06_M02916 TRANSFAC - 21264766 21264782 9.0E-06 GTTTAAAAATAACTTTG 17 V_HNF1A_Q5_M02013 TRANSFAC - 21264678 21264688 0.0E+00 AGTTAATATTT 11 V_IRF1_01_M00062 TRANSFAC - 21265082 21265094 0.0E+00 TAAAAGTGAAAGC 13 V_MEF2_01_M00006 TRANSFAC - 21264767 21264782 0.0E+00 GTTTAAAAATAACTTT 16 V_MEF2A_05_M01301 TRANSFAC + 21264769 21264780 0.0E+00 AGTTATTTTTAA 12 V_HMEF2_Q6_M00406 TRANSFAC - 21264767 21264782 0.0E+00 GTTTAAAAATAACTTT 16 V_RXRLXRB_01_M01198 TRANSFAC + 21273996 21274008 2.0E-06 AGGTCATAGGACA 13 V_LPOLYA_B_M00318 TRANSFAC + 21273975 21273982 7.0E-06 CAATAAAG 8 V_HNF1A_01_M02162 TRANSFAC - 21264675 21264688 2.0E-06 AGTTAATATTTGCT 14 V_IRXB3_01_M01377 TRANSFAC - 21265088 21265104 0.0E+00 TATTAACATGTAAAAGT 17 V_IRXB3_01_M01377 TRANSFAC + 21265089 21265105 2.0E-06 CTTTTACATGTTAATAA 17 V_OCT4_01_M01125 TRANSFAC + 21265089 21265103 2.0E-06 CTTTTACATGTTAAT 15 V_OCT4_01_M01125 TRANSFAC - 21265090 21265104 1.0E-06 TATTAACATGTAAAA 15 V_TCF4_01_M01705 TRANSFAC + 21269111 21269119 5.0E-06 TCTTTGATG 9

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.