Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

BSX


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSSMotifs
390259 brain-specific homeobox chr11 -122851879 - 122857379 122852379 BSX_homeodomain_DBD_monomeric_8_1
V_BSX_01_M01442

Transcription Factor Binding Sites

 
Download all TFBS in the BSX promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
REST_MA0138.2 JASPAR - 122852667 122852687 0.0E+00 TTCAGCACCGCGGACAGCTCC 21
V_ZFP410_04_M02936 TRANSFAC - 122854947 122854963 5.0E-06 CCGCCCCGCCCCTCATC 17
V_NRSF_Q4_M01028 TRANSFAC - 122847673 122847691 8.0E-06 CTAGAGCTCGCGGTTCTGC 19
V_NRSF_Q4_M01028 TRANSFAC + 122852668 122852686 0.0E+00 GAGCTGTCCGCGGTGCTGA 19
V_NF1_Q6_01_M00806 TRANSFAC + 122852802 122852818 7.0E-06 TTAAAAGAAAGCCAAAA 17
V_STAT_Q6_M00777 TRANSFAC - 122855060 122855072 6.0E-06 CTCTTTTCTTAGA 13
V_SP1_Q6_01_M00931 TRANSFAC + 122852655 122852664 4.0E-06 GGGGCGGGGC 10
V_SP1_Q6_01_M00931 TRANSFAC + 122854952 122854961 4.0E-06 GGGGCGGGGC 10
V_AP2_Q6_M00189 TRANSFAC - 122847636 122847647 3.0E-06 AGCCCCCAGGCG 12
V_SP1_02_M01303 TRANSFAC + 122852660 122852670 3.0E-06 GGGGCGGGGAG 11
V_NRSE_B_M00325 TRANSFAC - 122852667 122852687 0.0E+00 TTCAGCACCGCGGACAGCTCC 21
V_GC_01_M00255 TRANSFAC + 122854950 122854963 9.0E-06 GAGGGGCGGGGCGG 14
V_PR_Q2_M00960 TRANSFAC + 122847963 122847972 1.0E-06 GAAAGAACAG 10
V_SP1_Q6_M00196 TRANSFAC + 122854950 122854962 2.0E-06 GAGGGGCGGGGCG 13
V_ISRE_01_M00258 TRANSFAC + 122855396 122855410 8.0E-06 AGGTTTCAGATCCCG 15
V_REST_01_M01256 TRANSFAC + 122852663 122852684 0.0E+00 GCGGGGAGCTGTCCGCGGTGCT 22
V_STAT4_Q5_M02117 TRANSFAC + 122852802 122852811 2.0E-06 TTAAAAGAAA 10
V_MZF1_02_M00084 TRANSFAC + 122847972 122847984 1.0E-05 GAGCTAGGGGCAA 13
V_GATA4_Q3_M00632 TRANSFAC + 122855064 122855075 7.0E-06 AGAAAAGAGAGA 12
V_BCL6B_04_M02844 TRANSFAC - 122854947 122854962 5.0E-06 CGCCCCGCCCCTCATC 16
V_SP4_Q5_M01273 TRANSFAC - 122852654 122852664 2.0E-06 GCCCCGCCCCG 11
V_SP4_Q5_M01273 TRANSFAC - 122854951 122854961 8.0E-06 GCCCCGCCCCT 11
V_PLAG1_01_M01778 TRANSFAC + 122852627 122852642 6.0E-06 GAGGCAGAGGGGAGGG 16
V_ZFP161_04_M02933 TRANSFAC + 122847596 122847609 9.0E-06 GCCGCGCAGTACGC 14
V_NRF2_01_M00108 TRANSFAC - 122848280 122848289 3.0E-06 ACCGGAAGAC 10
V_NRSF_01_M00256 TRANSFAC - 122852667 122852687 0.0E+00 TTCAGCACCGCGGACAGCTCC 21
V_P53_05_M01655 TRANSFAC + 122855751 122855770 8.0E-06 GTACATTTTTAGACATTTTT 20
V_FOX_Q2_M00809 TRANSFAC + 122848224 122848236 4.0E-06 TTTTGTTTGTCTT 13
V_REST_02_M02256 TRANSFAC - 122852667 122852687 0.0E+00 TTCAGCACCGCGGACAGCTCC 21
V_SP1_Q2_01_M00933 TRANSFAC - 122854951 122854960 7.0E-06 CCCCGCCCCT 10
V_SP1_Q4_01_M00932 TRANSFAC + 122854950 122854962 4.0E-06 GAGGGGCGGGGCG 13
V_PAX4_04_M00380 TRANSFAC + 122854475 122854504 4.0E-06 AGAAATCAAGCCGTTCTGTCTCTCCACCCT 30
V_NANOG_02_M01247 TRANSFAC + 122852799 122852818 3.0E-06 TTTTTAAAAGAAAGCCAAAA 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL