Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

PLSCR5


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
389158 chr3 +146319003 - 146329003 0

Transcription Factor Binding Sites

 
Download all TFBS in the PLSCR5 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 146322983 146322998 5.0E-06 TGGCCTCTAAAGGTAA 16
Sox2_MA0143.1 JASPAR - 146323035 146323049 3.0E-06 CCTTTGTTTTCCAAC 15
V_AP1_Q2_M00173 TRANSFAC - 146323007 146323017 0.0E+00 AGTGACTCAGA 11
V_TCF3_01_M01594 TRANSFAC - 146323037 146323049 1.0E-06 CCTTTGTTTTCCA 13
V_AP1_Q4_M00188 TRANSFAC - 146323007 146323017 2.0E-06 AGTGACTCAGA 11
V_SOX11_03_M02795 TRANSFAC + 146323037 146323053 1.0E-06 TGGAAAACAAAGGCTTT 17
V_FOXO1_Q5_M01216 TRANSFAC + 146323039 146323047 5.0E-06 GAAAACAAA 9
V_AP1FJ_Q2_M00172 TRANSFAC - 146323007 146323017 1.0E-06 AGTGACTCAGA 11
V_TCF4_Q5_M00671 TRANSFAC - 146323020 146323027 1.0E-05 CCTTTGAA 8
V_SOX2_01_M02246 TRANSFAC - 146323035 146323049 3.0E-06 CCTTTGTTTTCCAAC 15
V_SOX4_01_M01308 TRANSFAC + 146323042 146323049 1.0E-05 AACAAAGG 8
V_RFX3_04_M02788 TRANSFAC - 146323020 146323042 3.0E-06 TTTCCAACCTGGCAACCTTTGAA 23
V_SMAD1_01_M01590 TRANSFAC + 146323039 146323050 3.0E-06 GAAAACAAAGGC 12
V_SOX9_Q4_M01284 TRANSFAC + 146323041 146323051 3.0E-06 AAACAAAGGCT 11
V_NANOG_02_M01247 TRANSFAC + 146323035 146323054 2.0E-06 GTTGGAAAACAAAGGCTTTT 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL