Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SLC6A17 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 388662 solute carrier family 6, member 17 chr1 + 110688131 - 110693631 110693131 Transcription Factor Binding Sites   Download all TFBS in the SLC6A17 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 110691771 110691789 4.0E-06 TCTCCACTAGAGGGAGACG 19 RFX2_RFX_DBD_dimeric_15_1 SELEX - 110691741 110691755 0.0E+00 GTTTGCTATGCAACC 15 RFX3_RFX_DBD_dimeric_15_1 SELEX - 110691741 110691755 1.0E-06 GTTTGCTATGCAACC 15 RFX4_RFX_DBD_dimeric_15_1 SELEX - 110691741 110691755 1.0E-05 GTTTGCTATGCAACC 15 POU1F1_POU_DBD_monomeric_17_1 SELEX + 110691990 110692006 6.0E-06 GCCATGAGTAATTAAAG 17 TFAP4_bHLH_full_dimeric_10_1 SELEX - 110695044 110695053 5.0E-06 AACAGCTGAC 10 V_AP1_Q2_M00173 TRANSFAC + 110694959 110694969 1.0E-06 GGTGACTCAGT 11 V_MSX3_01_M01341 TRANSFAC + 110691992 110692007 2.0E-06 CATGAGTAATTAAAGT 16 V_RP58_01_M00532 TRANSFAC + 110694898 110694909 6.0E-06 GGAACATCTGTG 12 V_HFH4_01_M00742 TRANSFAC + 110695006 110695018 5.0E-06 GTGAGTTTGTTTG 13 V_NKX61_03_M01489 TRANSFAC - 110691993 110692009 6.0E-06 GGACTTTAATTACTCAT 17 V_AP1_Q6_M00174 TRANSFAC + 110694959 110694969 2.0E-06 GGTGACTCAGT 11 V_HOXA6_01_M01392 TRANSFAC - 110691992 110692007 2.0E-06 ACTTTAATTACTCATG 16 V_HES1_Q2_M01009 TRANSFAC + 110691684 110691698 0.0E+00 AAGTCTTGTGGGCAG 15 V_AP1_Q4_M00188 TRANSFAC + 110694959 110694969 1.0E-06 GGTGACTCAGT 11 V_HOXB6_01_M01460 TRANSFAC + 110691992 110692007 4.0E-06 CATGAGTAATTAAAGT 16 V_CDX1_01_M01373 TRANSFAC + 110691993 110692008 7.0E-06 ATGAGTAATTAAAGTC 16 V_AP4_Q5_M00175 TRANSFAC + 110695044 110695053 8.0E-06 GTCAGCTGTT 10 V_TAL1BETAE47_01_M00065 TRANSFAC - 110694897 110694912 9.0E-06 AGCCACAGATGTTCCA 16 V_ZIC3_05_M02941 TRANSFAC - 110691979 110691993 6.0E-06 TGGCACAGCAGGCTG 15 V_CTCF_02_M01259 TRANSFAC - 110691773 110691792 5.0E-06 TGCTCTCCACTAGAGGGAGA 20 V_NKX63_01_M01470 TRANSFAC - 110691993 110692009 3.0E-06 GGACTTTAATTACTCAT 17 V_HBP1_04_M02866 TRANSFAC + 110691717 110691733 4.0E-06 TGTTCCCATTATCTTTT 17 V_HOXA7_02_M01336 TRANSFAC - 110691992 110692008 7.0E-06 GACTTTAATTACTCATG 17 V_ALPHACP1_01_M00687 TRANSFAC - 110694997 110695007 7.0E-06 ACTCCAATCAG 11 V_AP1FJ_Q2_M00172 TRANSFAC + 110694959 110694969 0.0E+00 GGTGACTCAGT 11 V_VAX1_01_M01397 TRANSFAC - 110691992 110692007 3.0E-06 ACTTTAATTACTCATG 16 V_NFE2_01_M00037 TRANSFAC - 110694960 110694970 6.0E-06 CACTGAGTCAC 11 V_HOXD3_01_M01338 TRANSFAC + 110691992 110692007 4.0E-06 CATGAGTAATTAAAGT 16 V_GATA1_02_M00126 TRANSFAC - 110691721 110691734 2.0E-06 TAAAAGATAATGGG 14 V_HOXD10_01_M01375 TRANSFAC + 110691809 110691825 6.0E-06 AGTATAATAAAGATATG 17 V_HOX13_02_M01452 TRANSFAC - 110691992 110692007 4.0E-06 ACTTTAATTACTCATG 16 V_HOXC8_01_M01321 TRANSFAC + 110691992 110692007 0.0E+00 CATGAGTAATTAAAGT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.