Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

TMEM179 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 388021 transmembrane protein 179 chr14 - 105070597 - 105076097 105071097 Transcription Factor Binding Sites   Download all TFBS in the TMEM179 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints ZBTB7A_C2H2_DBD_monomeric_12_1 SELEX - 105070576 105070587 8.0E-06 GACGACCACCGG 12 NFIA_NFI_full_dimeric_15_1 SELEX - 105068432 105068446 6.0E-06 GTGGCAAACTGCCAG 15 Zfp652_C2H2_DBD_monomeric_13_1 SELEX - 105066629 105066641 5.0E-06 AGACAGGGTTAAC 13 NFIX_NFI_full_dimeric_15_2 SELEX + 105068432 105068446 3.0E-06 CTGGCAGTTTGCCAC 15 NFIX_NFI_full_dimeric_15_2 SELEX - 105068432 105068446 9.0E-06 GTGGCAAACTGCCAG 15 ZNF238_C2H2_full_monomeric_13_1 SELEX - 105070489 105070501 5.0E-06 GTTGCAGATGTTG 13 RUNX3_RUNX_full_monomeric_10_1 SELEX + 105066781 105066790 5.0E-06 CAACCACAAA 10 RUNX2_RUNX_DBD_dimeric_16_1 SELEX + 105066781 105066796 7.0E-06 CAACCACAAACTGCTG 16 ZSCAN4_C2H2_full_monomeric_15_1 SELEX - 105066666 105066680 9.0E-06 GGCACATCCTGGCAG 15 NFIB_NFI_full_dimeric_15_1 SELEX - 105068432 105068446 8.0E-06 GTGGCAAACTGCCAG 15 RUNX1_MA0002.2 JASPAR - 105066781 105066791 9.0E-06 GTTTGTGGTTG 11 REST_MA0138.2 JASPAR + 105071230 105071250 0.0E+00 GTCAGCACCGCGGACAGCTCC 21 Hic1_C2H2_DBD_dimeric_18_1 SELEX + 105066666 105066683 2.0E-06 CTGCCAGGATGTGCCATC 18 V_AML_Q6_M00769 TRANSFAC - 105066779 105066793 7.0E-06 CAGTTTGTGGTTGGC 15 V_OSF2_Q6_M00731 TRANSFAC + 105066783 105066790 1.0E-05 ACCACAAA 8 V_BTEB3_Q5_M01865 TRANSFAC - 105066812 105066824 2.0E-06 CTGAGGGAGGATT 13 V_MAX_Q6_M01830 TRANSFAC + 105066798 105066809 8.0E-06 CAGCCCACGTGC 12 V_NRSF_Q4_M01028 TRANSFAC - 105071231 105071249 0.0E+00 GAGCTGTCCGCGGTGCTGA 19 V_AML3_Q6_M01856 TRANSFAC + 105066782 105066789 1.0E-05 AACCACAA 8 V_LMAF_Q2_M01139 TRANSFAC + 105068286 105068294 6.0E-06 GGTCAGCAG 9 V_RP58_01_M00532 TRANSFAC + 105070488 105070499 9.0E-06 GCAACATCTGCA 12 V_CMYC_02_M01154 TRANSFAC + 105066800 105066811 8.0E-06 GCCCACGTGCTC 12 V_NRSE_B_M00325 TRANSFAC + 105071230 105071250 1.0E-06 GTCAGCACCGCGGACAGCTCC 21 V_GC_01_M00255 TRANSFAC - 105068334 105068347 6.0E-06 AAGGGGTGGAGCCG 14 V_RUNX1_01_M02257 TRANSFAC - 105066781 105066791 9.0E-06 GTTTGTGGTTG 11 V_ZBTB7B_04_M02930 TRANSFAC - 105070573 105070589 9.0E-06 ATGACGACCACCGGTCC 17 V_AML2_01_M01759 TRANSFAC + 105066782 105066789 1.0E-05 AACCACAA 8 V_REST_01_M01256 TRANSFAC - 105071233 105071254 0.0E+00 ACCAGGAGCTGTCCGCGGTGCT 22 V_PAX6_Q2_M00979 TRANSFAC + 105066697 105066710 3.0E-06 CTGTCCTGGAAAGC 14 V_MUSCLE_INI_B_M00321 TRANSFAC - 105071147 105071167 1.0E-06 CGGCGCCGCCACTGCGCAGCC 21 V_PEBP_Q6_M00984 TRANSFAC + 105066779 105066793 8.0E-06 GCCAACCACAAACTG 15 V_PEBP_Q6_M00984 TRANSFAC + 105068357 105068371 1.0E-05 GAACACCACAAAGAG 15 V_NEUROD_02_M01288 TRANSFAC - 105070824 105070835 6.0E-06 CTGCTGCTGGCC 12 V_GLI3_01_M01596 TRANSFAC - 105068306 105068316 9.0E-06 CTGTGTGGCCT 11 V_AP4_01_M00005 TRANSFAC + 105066723 105066740 7.0E-06 AGGCTCAGCGCCGGCACG 18 V_NRSF_01_M00256 TRANSFAC + 105071230 105071250 0.0E+00 GTCAGCACCGCGGACAGCTCC 21 V_NRF1_Q6_M00652 TRANSFAC + 105071194 105071203 6.0E-06 CGCGTGCGCA 10 V_REST_02_M02256 TRANSFAC + 105071230 105071250 0.0E+00 GTCAGCACCGCGGACAGCTCC 21 V_T3RBETA_Q6_01_M02119 TRANSFAC + 105066581 105066597 3.0E-06 AGGCCAGGCCAGGACAG 17 V_NFE2_Q6_M02104 TRANSFAC + 105066846 105066861 8.0E-06 GCTGCCTCAGCAAACC 16 V_CTF1_01_M01196 TRANSFAC - 105068432 105068445 6.0E-06 TGGCAAACTGCCAG 14 V_CTF1_01_M01196 TRANSFAC - 105070927 105070940 4.0E-06 TGGCTGAGCGCCAA 14 TLX1_NFIC_MA0119.1 JASPAR - 105068432 105068445 6.0E-06 TGGCAAACTGCCAG 14 TLX1_NFIC_MA0119.1 JASPAR - 105070927 105070940 4.0E-06 TGGCTGAGCGCCAA 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.