Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

OR56B1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 387748 olfactory receptor, family 56, subfamily B, member 1 chr11 + 5752677 - 5758177 5757677 Transcription Factor Binding Sites   Download all TFBS in the OR56B1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX + 5758550 5758560 5.0E-06 AGTGACTCATC 11 SOX8_HMG_full_dimeric_15_1 SELEX - 5758297 5758311 7.0E-06 AGCACAGGCAGTGTT 15 SOX7_HMG_full_dimeric_17_2 SELEX - 5758283 5758299 6.0E-06 GTTCAATTTCATTCTTG 17 Sox1_HMG_DBD_dimeric_13_1 SELEX - 5758285 5758297 3.0E-06 TCAATTTCATTCT 13 Pax4_MA0068.1 JASPAR + 5758703 5758732 1.0E-06 AAAAGAAATAAGATCTTAGAGACCTTCTCC 30 RARG_nuclearreceptor_full_dimeric_18_1 SELEX - 5758445 5758462 5.0E-06 GAGTTCAGTCTAAGTACA 18 SOX2_HMG_full_dimeric_15_1 SELEX - 5758284 5758298 6.0E-06 TTCAATTTCATTCTT 15 SOX9_HMG_full_dimeric_16_3 SELEX + 5759076 5759091 3.0E-06 ATGAATCACAGGTCAT 16 ZNF282_C2H2_DBD_monomeric_17_1 SELEX + 5758623 5758639 1.0E-06 CCTTCCCTCAACCCTAC 17 JDP2_bZIP_full_dimeric_9_1 SELEX - 5758551 5758559 1.0E-05 ATGAGTCAC 9 SRY_HMG_DBD_dimeric_13_1 SELEX - 5758285 5758297 6.0E-06 TCAATTTCATTCT 13 REST_MA0138.2 JASPAR - 5758205 5758225 0.0E+00 CTCAGCACCATGAACAGGGTA 21 Sox1_HMG_DBD_dimeric_15_2 SELEX - 5758284 5758298 3.0E-06 TTCAATTTCATTCTT 15 V_FOXP1_01_M00987 TRANSFAC - 5759027 5759046 4.0E-06 GTATGTGTGTCTGTGTGTGT 20 V_MEIS1BHOXA9_02_M00421 TRANSFAC - 5758411 5758424 1.0E-06 TGACAGTATAATAA 14 V_ER_Q6_02_M00959 TRANSFAC + 5759084 5759094 5.0E-06 CAGGTCATGCT 11 V_HSF1_Q6_M01023 TRANSFAC + 5757821 5757837 7.0E-06 ATTCCCGGGCATTCACA 17 V_NRSF_Q4_M01028 TRANSFAC + 5758206 5758224 2.0E-06 ACCCTGTTCATGGTGCTGA 19 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 5758419 5758430 3.0E-06 AATATATGACAG 12 V_FOXJ2_02_M00423 TRANSFAC - 5758527 5758540 5.0E-06 ACAACAATAGTGTA 14 V_FOXJ1_04_M02854 TRANSFAC - 5758534 5758548 1.0E-05 AAATCACTACAACAA 15 V_GATA1_03_M00127 TRANSFAC + 5758267 5758280 1.0E-05 AGCGTGATTATTGC 14 V_HNF3_Q6_01_M01012 TRANSFAC - 5757710 5757727 1.0E-06 ATCTCTATTTGTATTGTT 18 V_MAF_Q6_M00648 TRANSFAC - 5758618 5758633 8.0E-06 TTGAGGGAAGGGGGGA 16 V_CDX_Q5_M00991 TRANSFAC + 5757715 5757732 1.0E-06 TACAAATAGAGATTTGAA 18 V_HBP1_Q2_M01661 TRANSFAC + 5759048 5759056 8.0E-06 TTCAATCAG 9 V_SOX7_03_M02807 TRANSFAC + 5757703 5757724 1.0E-06 AACTGAGAACAATACAAATAGA 22 V_SOX7_03_M02807 TRANSFAC - 5758524 5758545 9.0E-06 TCACTACAACAATAGTGTAAAA 22 V_NKX61_01_M00424 TRANSFAC + 5758594 5758606 3.0E-06 TACTTAATGTGTT 13 V_CEBPB_02_M00117 TRANSFAC + 5758602 5758615 1.0E-05 GTGTTGCACAACAT 14 V_HNF3_Q6_M00791 TRANSFAC + 5757712 5757724 4.0E-06 CAATACAAATAGA 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 5757712 5757722 6.0E-06 TATTTGTATTG 11 V_SOX12_04_M02900 TRANSFAC + 5759051 5759066 1.0E-06 AATCAGACAAATGAGT 16 V_ZIC3_05_M02941 TRANSFAC + 5758261 5758275 6.0E-06 CAGCACAGCGTGATT 15 V_ATF1_04_M02842 TRANSFAC - 5758232 5758245 7.0E-06 GAGTGACAAATAAG 14 V_SOX17_04_M02904 TRANSFAC + 5759037 5759053 8.0E-06 ACACACATACATTCAAT 17 V_GCNF_01_M00526 TRANSFAC - 5758287 5758304 8.0E-06 GCAGTGTTCAATTTCATT 18 V_SOX15_03_M02799 TRANSFAC + 5757705 5757721 2.0E-06 CTGAGAACAATACAAAT 17 V_MTF1_06_M02882 TRANSFAC + 5758701 5758714 7.0E-06 ACAAAAGAAATAAG 14 V_TAL1_01_M01591 TRANSFAC + 5758514 5758526 4.0E-06 CATCCTTTTCTTT 13 V_FOXJ3_06_M02855 TRANSFAC - 5758422 5758438 4.0E-06 AGAATCAAAATATATGA 17 V_NRSF_01_M00256 TRANSFAC - 5758205 5758225 5.0E-06 CTCAGCACCATGAACAGGGTA 21 V_REST_02_M02256 TRANSFAC - 5758205 5758225 0.0E+00 CTCAGCACCATGAACAGGGTA 21 V_SMAD_Q6_01_M00974 TRANSFAC - 5759142 5759152 6.0E-06 TAGGCAGACTG 11 V_SOX8_03_M02808 TRANSFAC - 5757705 5757721 3.0E-06 ATTTGTATTGTTCTCAG 17 V_PBX_Q3_M00998 TRANSFAC - 5759043 5759054 7.0E-06 GATTGAATGTAT 12 V_SRF_06_M02916 TRANSFAC - 5758515 5758531 8.0E-06 GTGTAAAAGAAAAGGAT 17 V_FOXJ2_01_M00422 TRANSFAC + 5757710 5757727 7.0E-06 AACAATACAAATAGAGAT 18 V_NFE2_Q6_M02104 TRANSFAC + 5758550 5758565 9.0E-06 AGTGACTCATCTGACA 16 V_NFE2_01_M00037 TRANSFAC - 5758551 5758561 9.0E-06 AGATGAGTCAC 11 V_SOX15_04_M02903 TRANSFAC + 5758284 5758298 5.0E-06 AAGAATGAAATTGAA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.