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THEMIS Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 387357 thymocyte selection associated chr6 - 128239276 - 128244776 128239776 Transcription Factor Binding Sites   Download all TFBS in the THEMIS promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints EOMES_TBX_DBD_dimeric_20_1 SELEX - 128235619 128235638 8.0E-06 ACACACCTAGGTTTGTGTAA 20 SOX21_HMG_DBD_dimeric_15_1 SELEX + 128235584 128235598 0.0E+00 GGCAATTTCATTGTT 15 SOX4_HMG_DBD_dimeric_16_1 SELEX + 128235583 128235598 1.0E-06 AGGCAATTTCATTGTT 16 SOX10_HMG_full_dimeric_15_3 SELEX + 128235526 128235540 5.0E-06 ATGAAACATAGTCAT 15 SOX10_HMG_full_dimeric_15_3 SELEX + 128239882 128239896 9.0E-06 ACCAATTCCAGTTAT 15 SRY_HMG_DBD_dimeric_15_1 SELEX + 128235584 128235598 1.0E-06 GGCAATTTCATTGTT 15 SRY_HMG_DBD_dimeric_15_1 SELEX - 128235584 128235598 7.0E-06 AACAATGAAATTGCC 15 SOX2_HMG_full_dimeric_17_1 SELEX + 128235583 128235599 4.0E-06 AGGCAATTTCATTGTTG 17 SOX2_HMG_full_dimeric_17_1 SELEX - 128235583 128235599 9.0E-06 CAACAATGAAATTGCCT 17 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 128239925 128239941 7.0E-06 TTAAACAATTCTGAACT 17 SOX9_HMG_full_dimeric_17_3 SELEX + 128235525 128235541 3.0E-06 TATGAAACATAGTCATG 17 SOX8_HMG_full_dimeric_15_1 SELEX + 128235584 128235598 1.0E-06 GGCAATTTCATTGTT 15 SOX8_HMG_full_dimeric_17_1 SELEX + 128239881 128239897 3.0E-06 AACCAATTCCAGTTATT 17 Sox17_HMG_DBD_dimeric_15_1 SELEX + 128235584 128235598 1.0E-06 GGCAATTTCATTGTT 15 Sox17_HMG_DBD_dimeric_15_1 SELEX - 128235584 128235598 6.0E-06 AACAATGAAATTGCC 15 SOX15_HMG_full_dimeric_15_3 SELEX - 128235526 128235540 6.0E-06 ATGACTATGTTTCAT 15 Sox17_HMG_DBD_dimeric_15_2 SELEX + 128235526 128235540 5.0E-06 ATGAAACATAGTCAT 15 SOX14_HMG_DBD_dimeric_13_1 SELEX + 128235585 128235597 1.0E-05 GCAATTTCATTGT 13 SRY_MA0084.1 JASPAR - 128239933 128239941 1.0E-06 TTAAACAAT 9 SOX18_HMG_full_dimeric_15_1 SELEX + 128235584 128235598 0.0E+00 GGCAATTTCATTGTT 15 SOX15_HMG_full_dimeric_15_1 SELEX + 128235465 128235479 8.0E-06 AAGAAAAACATAGTT 15 SOX15_HMG_full_dimeric_15_1 SELEX + 128235584 128235598 5.0E-06 GGCAATTTCATTGTT 15 SOX7_HMG_full_dimeric_16_1 SELEX + 128235550 128235565 2.0E-06 AACAATGAGATATGTT 16 SOX7_HMG_full_dimeric_17_1 SELEX + 128235583 128235599 1.0E-06 AGGCAATTTCATTGTTG 17 SOX14_HMG_DBD_dimeric_12_1 SELEX + 128235585 128235596 5.0E-06 GCAATTTCATTG 12 SOX14_HMG_DBD_dimeric_12_1 SELEX - 128235586 128235597 6.0E-06 ACAATGAAATTG 12 Sox11_HMG_DBD_dimeric_15_1 SELEX + 128235584 128235598 1.0E-06 GGCAATTTCATTGTT 15 Sox3_HMG_DBD_dimeric_17_3 SELEX + 128235525 128235541 6.0E-06 TATGAAACATAGTCATG 17 Sox3_HMG_DBD_dimeric_17_1 SELEX + 128235583 128235599 0.0E+00 AGGCAATTTCATTGTTG 17 Sox3_HMG_DBD_dimeric_17_1 SELEX - 128235583 128235599 1.0E-06 CAACAATGAAATTGCCT 17 Sox1_HMG_DBD_dimeric_15_1 SELEX + 128235584 128235598 0.0E+00 GGCAATTTCATTGTT 15 Sox1_HMG_DBD_dimeric_15_1 SELEX - 128235584 128235598 6.0E-06 AACAATGAAATTGCC 15 SOX9_HMG_full_dimeric_17_1 SELEX + 128235583 128235599 4.0E-06 AGGCAATTTCATTGTTG 17 V_STAT5A_Q6_M01890 TRANSFAC - 128235564 128235576 1.0E-06 GCATTTCTCAGAA 13 V_TCF3_01_M01594 TRANSFAC + 128235478 128235490 5.0E-06 TTTTTCTTTTTCT 13 V_EBF_Q6_M00977 TRANSFAC - 128235506 128235516 7.0E-06 GTCCCTTAGGA 11 V_HNF1_02_M01379 TRANSFAC + 128239891 128239907 6.0E-06 AGTTATTTAACCTAAAG 17 V_SOX30_03_M02804 TRANSFAC + 128235546 128235561 6.0E-06 ACTTAACAATGAGATA 16 V_SOX30_03_M02804 TRANSFAC - 128235587 128235602 0.0E+00 ACGCAACAATGAAATT 16 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 128239913 128239924 6.0E-06 AATTATTACAAG 12 V_SOX5_01_M00042 TRANSFAC + 128235548 128235557 7.0E-06 TTAACAATGA 10 V_IRF_Q6_01_M00972 TRANSFAC - 128235479 128235489 7.0E-06 GAAAAAGAAAA 11 V_SOX11_04_M02899 TRANSFAC + 128239911 128239924 6.0E-06 AAAATTATTACAAG 14 V_SOX11_04_M02899 TRANSFAC + 128239930 128239943 1.0E-06 AGAATTGTTTAAAG 14 V_STAT5B_01_M00459 TRANSFAC - 128235561 128235575 8.0E-06 CATTTCTCAGAACAT 15 V_STAT6_01_M00494 TRANSFAC - 128239868 128239875 7.0E-06 TATTTCCA 8 V_SOX21_03_M02803 TRANSFAC + 128239904 128239919 6.0E-06 AAAGATTAAAATTATT 16 V_PAX_Q6_M00808 TRANSFAC + 128239867 128239877 1.0E-06 CTGGAAATAAC 11 V_STAT4_Q4_M01666 TRANSFAC + 128235564 128235577 5.0E-06 TTCTGAGAAATGCA 14 V_OCT1_03_M00137 TRANSFAC - 128235518 128235530 0.0E+00 TTCATAATGAAAT 13 V_OCT1_03_M00137 TRANSFAC - 128239912 128239924 1.0E-05 CTTGTAATAATTT 13 V_PXRRXR_02_M01153 TRANSFAC + 128239923 128239930 1.0E-05 AGAGTTCA 8 V_SOX_Q6_M01014 TRANSFAC - 128235546 128235558 1.0E-06 CTCATTGTTAAGT 13 V_HNF1_Q6_01_M01011 TRANSFAC + 128239897 128239917 6.0E-06 TTAACCTAAAGATTAAAATTA 21 V_ISRE_01_M00258 TRANSFAC + 128235475 128235489 8.0E-06 TAGTTTTTCTTTTTC 15 V_OCT1_04_M00138 TRANSFAC + 128239900 128239922 5.0E-06 ACCTAAAGATTAAAATTATTACA 23 V_OCT1_04_M00138 TRANSFAC - 128239901 128239923 4.0E-06 TTGTAATAATTTTAATCTTTAGG 23 V_PAX8_01_M00717 TRANSFAC + 128235592 128235606 4.0E-06 CATTGTTGCGTTAAT 15 V_STAT4_Q5_M02117 TRANSFAC + 128235564 128235573 5.0E-06 TTCTGAGAAA 10 V_SOX9_B1_M00410 TRANSFAC + 128235546 128235559 8.0E-06 ACTTAACAATGAGA 14 V_PAX8_B_M00328 TRANSFAC + 128235591 128235608 2.0E-06 TCATTGTTGCGTTAATCA 18 V_HBP1_04_M02866 TRANSFAC - 128235546 128235562 3.0E-06 ATATCTCATTGTTAAGT 17 V_MTF1_06_M02882 TRANSFAC + 128235461 128235474 6.0E-06 TACTAAGAAAAACA 14 V_PARP_Q3_M01211 TRANSFAC + 128235464 128235473 8.0E-06 TAAGAAAAAC 10 V_TCF7_04_M02921 TRANSFAC - 128240091 128240105 1.0E-06 CTCTATTACAAACTA 15 V_TCF1_06_M02815 TRANSFAC + 128239891 128239907 7.0E-06 AGTTATTTAACCTAAAG 17 V_DMRT7_01_M01151 TRANSFAC - 128239910 128239923 2.0E-06 TTGTAATAATTTTA 14 V_STAT1STAT1_Q3_M01212 TRANSFAC - 128235562 128235574 3.0E-06 ATTTCTCAGAACA 13 V_SRF_06_M02916 TRANSFAC - 128235474 128235490 3.0E-06 AGAAAAAGAAAAACTAT 17 V_HOMEZ_01_M01429 TRANSFAC + 128235469 128235485 1.0E-06 AAAACATAGTTTTTCTT 17 V_PIT1_Q6_M00802 TRANSFAC + 128235518 128235535 1.0E-06 ATTTCATTATGAAACATA 18 V_SOX5_07_M02909 TRANSFAC + 128239908 128239924 5.0E-06 ATTAAAATTATTACAAG 17 V_SMAD1_01_M01590 TRANSFAC - 128235477 128235488 8.0E-06 AAAAAGAAAAAC 12 V_PAX6_01_M00097 TRANSFAC - 128235589 128235609 9.0E-06 ATGATTAACGCAACAATGAAA 21 V_NANOG_02_M01247 TRANSFAC - 128235586 128235605 6.0E-06 TTAACGCAACAATGAAATTG 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.