Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SUMO4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 387082 chr6 + 149716494 - 149726494 0 Transcription Factor Binding Sites   Download all TFBS in the SUMO4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Sox1_HMG_DBD_dimeric_14_1 SELEX + 149724843 149724856 2.0E-06 GGAACTTTTATTCA 14 Sox1_HMG_DBD_dimeric_14_1 SELEX - 149724843 149724856 4.0E-06 TGAATAAAAGTTCC 14 Tp53_p53l_DBD_dimeric_18_2 SELEX + 149724874 149724891 2.0E-06 AGCAAGCAGAGGCATGTC 18 Tp53_p53l_DBD_dimeric_18_2 SELEX - 149724874 149724891 3.0E-06 GACATGCCTCTGCTTGCT 18 EWSR1-FLI1_MA0149.1 JASPAR + 149724867 149724884 2.0E-06 TGAAGGAAGCAAGCAGAG 18 Tp73_p53l_DBD_dimeric_18_1 SELEX + 149724874 149724891 1.0E-05 AGCAAGCAGAGGCATGTC 18 V_BTEB3_Q5_M01865 TRANSFAC + 149724793 149724805 7.0E-06 GTATAGGAAGCGT 13 V_POU1F1_Q6_M00744 TRANSFAC - 149724848 149724857 1.0E-06 ATGAATAAAA 10 V_P53_02_M00272 TRANSFAC - 149724883 149724892 7.0E-06 TGACATGCCT 10 V_TST1_01_M00133 TRANSFAC - 149724844 149724858 2.0E-06 CATGAATAAAAGTTC 15 V_SOX8_04_M02912 TRANSFAC + 149724850 149724863 9.0E-06 TTATTCATGGCAGA 14 V_P53_03_M01651 TRANSFAC + 149724873 149724892 2.0E-06 AAGCAAGCAGAGGCATGTCA 20 V_P53_03_M01651 TRANSFAC - 149724873 149724892 2.0E-06 TGACATGCCTCTGCTTGCTT 20 V_STAT5A_02_M00460 TRANSFAC + 149724838 149724861 3.0E-06 TTCAGGGAACTTTTATTCATGGCA 24 V_STAT5A_02_M00460 TRANSFAC - 149724838 149724861 9.0E-06 TGCCATGAATAAAAGTTCCCTGAA 24 V_PAX8_01_M00717 TRANSFAC - 149724964 149724978 1.0E-06 CAATAATGAGTGAGA 15 V_PAX8_B_M00328 TRANSFAC - 149724962 149724979 0.0E+00 TCAATAATGAGTGAGATA 18 V_P53_05_M01655 TRANSFAC - 149724873 149724892 4.0E-06 TGACATGCCTCTGCTTGCTT 20 V_P53_04_M01652 TRANSFAC - 149724873 149724892 9.0E-06 TGACATGCCTCTGCTTGCTT 20 V_P63_01_M01656 TRANSFAC + 149724873 149724892 6.0E-06 AAGCAAGCAGAGGCATGTCA 20 V_P63_01_M01656 TRANSFAC - 149724873 149724892 5.0E-06 TGACATGCCTCTGCTTGCTT 20 V_EWSR1FLI1_01_M02252 TRANSFAC + 149724867 149724884 2.0E-06 TGAAGGAAGCAAGCAGAG 18 V_PPARG_02_M00515 TRANSFAC + 149724763 149724785 8.0E-06 AAGCATGTCACCGATACCCACAT 23

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.