Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

KCTD8 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 386617 potassium channel tetramerization domain containing 8 chr4 - 44450324 - 44455824 44450824 Transcription Factor Binding Sites   Download all TFBS in the KCTD8 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints KLF16_C2H2_DBD_monomeric_11_1 SELEX - 44451082 44451092 1.0E-05 GCCCCGCCCCC 11 Zfp652_C2H2_DBD_monomeric_13_1 SELEX + 44449461 44449473 5.0E-06 ATAAGGAGTTAAC 13 KLF14_C2H2_DBD_monomeric_14_1 SELEX - 44451080 44451093 8.0E-06 GGCCCCGCCCCCTA 14 EWSR1-FLI1_MA0149.1 JASPAR - 44448806 44448823 5.0E-06 GCAAGGGAGGAGGGAGGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 44450874 44450891 6.0E-06 GGGAGGGCGGGAGGAGGG 18 EWSR1-FLI1_MA0149.1 JASPAR - 44451186 44451203 8.0E-06 GAAATGAAGGAATGAGAG 18 EWSR1-FLI1_MA0149.1 JASPAR - 44451230 44451247 4.0E-06 GAAAGGAGGGAGGAAAGG 18 EWSR1-FLI1_MA0149.1 JASPAR - 44451231 44451248 0.0E+00 GGAAAGGAGGGAGGAAAG 18 EWSR1-FLI1_MA0149.1 JASPAR - 44451243 44451260 0.0E+00 GGAAGAGAAGAAGGAAAG 18 EWSR1-FLI1_MA0149.1 JASPAR - 44451247 44451264 1.0E-06 GGAAGGAAGAGAAGAAGG 18 EWSR1-FLI1_MA0149.1 JASPAR - 44451251 44451268 0.0E+00 GGAAGGAAGGAAGAGAAG 18 EWSR1-FLI1_MA0149.1 JASPAR - 44451255 44451272 0.0E+00 GCAAGGAAGGAAGGAAGA 18 EWSR1-FLI1_MA0149.1 JASPAR - 44451259 44451276 0.0E+00 GGAGGCAAGGAAGGAAGG 18 EWSR1-FLI1_MA0149.1 JASPAR - 44451263 44451280 0.0E+00 GGAGGGAGGCAAGGAAGG 18 Esrrb_MA0141.1 JASPAR - 44450090 44450101 4.0E-06 CGCCCAAGGTCA 12 RHOXF1_homeodomain_full_dimeric_9_1 SELEX + 44450203 44450211 8.0E-06 AGATAATCC 9 FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX + 44448970 44448981 0.0E+00 TTTCCCCACACC 12 SP1_MA0079.2 JASPAR - 44450883 44450892 9.0E-06 CCCCTCCTCC 10 SP1_MA0079.2 JASPAR - 44451082 44451091 7.0E-06 CCCCGCCCCC 10 SP4_C2H2_full_monomeric_17_1 SELEX - 44451079 44451095 5.0E-06 TCGGCCCCGCCCCCTAG 17 NFATC1_NFAT_full_dimeric_20_1 SELEX - 44448935 44448954 2.0E-06 GATGGAAACCCAGATTTCCC 20 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX + 44448970 44448980 0.0E+00 TTTCCCCACAC 11 FOXO6_forkhead_DBD_putatively-multimeric_14_1 SELEX + 44448970 44448983 1.0E-06 TTTCCCCACACCCG 14 FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX + 44448970 44448981 0.0E+00 TTTCCCCACACC 12 DPRX_homeodomain_DBD_monomeric_11_1 SELEX + 44450202 44450212 6.0E-06 CAGATAATCCA 11 V_TGIF_01_M00418 TRANSFAC + 44451029 44451039 2.0E-06 AGCTGTCATTT 11 V_ATF5_01_M01295 TRANSFAC + 44451253 44451263 9.0E-06 TCTCTTCCTTC 11 V_LRH1_Q5_01_M02098 TRANSFAC - 44450090 44450100 9.0E-06 GCCCAAGGTCA 11 V_TCF4_Q5_01_M02033 TRANSFAC + 44449698 44449707 7.0E-06 ATCAAAGGCC 10 V_SP1_Q6_01_M00931 TRANSFAC + 44451083 44451092 4.0E-06 GGGGCGGGGC 10 V_CREB_Q4_01_M00917 TRANSFAC + 44450993 44451003 9.0E-06 CACTGACGTCA 11 V_SP1_03_M02281 TRANSFAC - 44450883 44450892 9.0E-06 CCCCTCCTCC 10 V_SP1_03_M02281 TRANSFAC - 44451082 44451091 7.0E-06 CCCCGCCCCC 10 V_STAT6_01_M00494 TRANSFAC - 44450128 44450135 7.0E-06 TATTTCCA 8 V_PU1_Q4_M01172 TRANSFAC + 44451240 44451258 6.0E-06 CTCCTTTCCTTCTTCTCTT 19 V_LDSPOLYA_B_M00317 TRANSFAC + 44448939 44448954 7.0E-06 AATCTGGGTTTCCATC 16 V_GC_01_M00255 TRANSFAC + 44451081 44451094 0.0E+00 AGGGGGCGGGGCCG 14 V_HELIOSA_02_M01004 TRANSFAC + 44448415 44448425 1.0E-05 CAAAGGAAAAA 11 V_TGIF_02_M01346 TRANSFAC - 44451025 44451041 1.0E-06 TTAAATGACAGCTGAGG 17 V_BEL1_B_M00312 TRANSFAC - 44451009 44451036 8.0E-06 TGACAGCTGAGGCTCGGGTCCCAGTCCG 28 V_TEF_Q6_M00672 TRANSFAC + 44450368 44450379 5.0E-06 TTGGTCACATAA 12 V_NFAT_Q6_M00302 TRANSFAC + 44448415 44448426 3.0E-06 CAAAGGAAAAAC 12 V_SP4_03_M02810 TRANSFAC - 44451077 44451093 7.0E-06 GGCCCCGCCCCCTAGCG 17 V_KROX_Q6_M00982 TRANSFAC - 44450806 44450819 3.0E-06 CCCGCCCTCGCCCC 14 V_P53_03_M01651 TRANSFAC + 44448390 44448409 3.0E-06 AGGCAAGTTTTAACTTGTGT 20 V_P53_03_M01651 TRANSFAC - 44448390 44448409 3.0E-06 ACACAAGTTAAAACTTGCCT 20 V_SP1_Q6_M00196 TRANSFAC + 44451081 44451093 0.0E+00 AGGGGGCGGGGCC 13 V_MAZ_Q6_01_M02023 TRANSFAC - 44451229 44451242 1.0E-06 GAGGGAGGAAAGGG 14 V_NFE4_Q5_M02105 TRANSFAC + 44451273 44451284 5.0E-06 CTCCCTCCCCAG 12 V_PAX6_Q2_M00979 TRANSFAC + 44450122 44450135 4.0E-06 GTGAGCTGGAAATA 14 V_KLF7_03_M02773 TRANSFAC - 44451080 44451095 2.0E-06 TCGGCCCCGCCCCCTA 16 V_CREB_Q2_01_M00916 TRANSFAC - 44450992 44451005 4.0E-06 CTTGACGTCAGTGC 14 V_TGIF1_01_M03111 TRANSFAC - 44451025 44451041 1.0E-06 TTAAATGACAGCTGAGG 17 V_MZF1_02_M00084 TRANSFAC - 44448820 44448832 6.0E-06 TTAGGAGGGGCAA 13 V_BLIMP1_Q6_M01066 TRANSFAC - 44451196 44451211 0.0E+00 GAGGGAGTGAAATGAA 16 V_ICSBP_Q6_M00699 TRANSFAC - 44450579 44450590 6.0E-06 AACGAGAAAGTG 12 V_SF1_Q6_01_M01132 TRANSFAC + 44450090 44450098 7.0E-06 TGACCTTGG 9 V_SP4_Q5_M01273 TRANSFAC - 44451082 44451092 1.0E-06 GCCCCGCCCCC 11 V_CREM_Q6_M01820 TRANSFAC - 44450993 44451003 4.0E-06 TGACGTCAGTG 11 V_MYOD_Q6_02_M02100 TRANSFAC + 44451028 44451036 4.0E-06 CAGCTGTCA 9 V_TAL1_01_M01591 TRANSFAC + 44451247 44451259 1.0E-05 CCTTCTTCTCTTC 13 V_CAAT_C_M00200 TRANSFAC + 44448431 44448455 9.0E-06 GCCAAATAATGTTCCTGCTGCCATC 25 V_ERR2_01_M01589 TRANSFAC - 44450087 44450098 5.0E-06 CCAAGGTCACCA 12 V_ATF2_Q5_M01862 TRANSFAC + 44450993 44451004 6.0E-06 CACTGACGTCAA 12 V_P53_04_M01652 TRANSFAC + 44448390 44448409 4.0E-06 AGGCAAGTTTTAACTTGTGT 20 V_SMAD_Q6_01_M00974 TRANSFAC - 44448406 44448416 7.0E-06 TGGCCAGACAC 11 V_HIF2A_01_M01249 TRANSFAC - 44450211 44450220 3.0E-06 GTACGTGCTG 10 V_E2F_01_M00024 TRANSFAC + 44451164 44451178 8.0E-06 AAAGCGAGAAAAAGG 15 V_EWSR1FLI1_01_M02252 TRANSFAC - 44448806 44448823 5.0E-06 GCAAGGGAGGAGGGAGGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 44450874 44450891 6.0E-06 GGGAGGGCGGGAGGAGGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 44451186 44451203 8.0E-06 GAAATGAAGGAATGAGAG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 44451230 44451247 4.0E-06 GAAAGGAGGGAGGAAAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 44451231 44451248 0.0E+00 GGAAAGGAGGGAGGAAAG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 44451243 44451260 0.0E+00 GGAAGAGAAGAAGGAAAG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 44451247 44451264 1.0E-06 GGAAGGAAGAGAAGAAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 44451251 44451268 0.0E+00 GGAAGGAAGGAAGAGAAG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 44451255 44451272 0.0E+00 GCAAGGAAGGAAGGAAGA 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 44451259 44451276 0.0E+00 GGAGGCAAGGAAGGAAGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 44451263 44451280 0.0E+00 GGAGGGAGGCAAGGAAGG 18 V_ERR1_Q2_01_M02093 TRANSFAC - 44450087 44450097 7.0E-06 CAAGGTCACCA 11 V_PPARG_02_M00515 TRANSFAC + 44449714 44449736 9.0E-06 AAGTAGGTGAACTTGAGGTAGAA 23 V_PPARG_02_M00515 TRANSFAC - 44449714 44449736 1.0E-06 TTCTACCTCAAGTTCACCTACTT 23 V_SP1_Q2_01_M00933 TRANSFAC - 44451082 44451091 4.0E-06 CCCCGCCCCC 10 V_SP1_Q4_01_M00932 TRANSFAC + 44451081 44451093 0.0E+00 AGGGGGCGGGGCC 13 V_ATF_B_M00338 TRANSFAC - 44450993 44451004 1.0E-06 TTGACGTCAGTG 12 V_ER_Q6_M00191 TRANSFAC - 44450367 44450385 9.0E-06 CCAGGTTTATGTGACCAAG 19

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.