Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

CERKL


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
375298 ceramide kinase-like chr2 -182521334 - 182526834 182521834

Transcription Factor Binding Sites

 
Download all TFBS in the CERKL promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
SOX10_HMG_full_dimeric_16_1 SELEX + 182520620 182520635 3.0E-06 AACAATGGGGAGTATT 16
Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX - 182525214 182525227 1.0E-06 GGGGACAAAGGTCA 14
SOX10_HMG_full_dimeric_15_3 SELEX + 182523398 182523412 4.0E-06 ATGAGTTGCAGTTCT 15
SPIC_ETS_full_monomeric_14_1 SELEX + 182521952 182521965 7.0E-06 TGCAAGAGGAAGAA 14
SOX9_HMG_full_dimeric_16_1 SELEX + 182520620 182520635 1.0E-06 AACAATGGGGAGTATT 16
NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX - 182525210 182525222 2.0E-06 CAAAGGTCAAAGA 13
EBF1_EBF_full_dimeric_14_1 SELEX - 182521272 182521285 5.0E-06 AACCCCCAGGGATT 14
LHX2_homeodomain_DBD_dimeric_15_1 SELEX - 182523445 182523459 6.0E-06 TAATTGTGTTGATTG 15
SOX8_HMG_DBD_dimeric_16_1 SELEX + 182520620 182520635 3.0E-06 AACAATGGGGAGTATT 16
SOX9_HMG_full_dimeric_17_3 SELEX + 182523397 182523413 6.0E-06 AATGAGTTGCAGTTCTG 17
RXRG_nuclearreceptor_full_dimeric_14_1 SELEX - 182525214 182525227 0.0E+00 GGGGACAAAGGTCA 14
NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX - 182525214 182525227 1.0E-06 GGGGACAAAGGTCA 14
SRY_HMG_DBD_dimeric_16_1 SELEX - 182520620 182520635 4.0E-06 AATACTCCCCATTGTT 16
EWSR1-FLI1_MA0149.1 JASPAR + 182521448 182521465 6.0E-06 GGGAGGAAGCGCGGAGGG 18
TCF7L1_HMG_full_monomeric_12_1 SELEX - 182525210 182525221 1.0E-06 AAAGGTCAAAGA 12
FOXI1_MA0042.1 JASPAR - 182520425 182520436 9.0E-06 TGGTATTTATGT 12
NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX - 182525213 182525227 0.0E+00 GGGGACAAAGGTCAA 15
NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX - 182525214 182525227 3.0E-06 GGGGACAAAGGTCA 14
SOX7_HMG_full_dimeric_16_1 SELEX + 182520620 182520635 1.0E-06 AACAATGGGGAGTATT 16
HNF4A_nuclearreceptor_full_dimeric_15_1 SELEX - 182525213 182525227 0.0E+00 GGGGACAAAGGTCAA 15
RFX5_RFX_DBD_dimeric_16_3 SELEX + 182521829 182521844 8.0E-06 CGCTGCCACAGCAACG 16
HNF4A_MA0114.1 JASPAR - 182525214 182525226 1.0E-06 GGGACAAAGGTCA 13
SOX21_HMG_DBD_dimeric_16_1 SELEX + 182520620 182520635 3.0E-06 AACAATGGGGAGTATT 16
Rhox11_homeodomain_DBD_monomeric_9_1 SELEX - 182521634 182521642 7.0E-06 CGCTGTTAA 9
HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX - 182525214 182525227 0.0E+00 GGGGACAAAGGTCA 14
RXRA_nuclearreceptor_full_dimeric_14_1 SELEX - 182525214 182525227 1.0E-06 GGGGACAAAGGTCA 14
V_CEBPG_Q6_M00622 TRANSFAC - 182520648 182520660 7.0E-06 CTTATTTCTAAGT 13
V_FREAC7_01_M00293 TRANSFAC + 182520422 182520437 7.0E-06 GTAACATAAATACCAC 16
V_ATF_01_M00017 TRANSFAC + 182521216 182521229 1.0E-05 TTGTGACGTTTGCC 14
V_BCL6_01_M01183 TRANSFAC + 182520374 182520389 7.0E-06 CATTTTGTTAGACTTT 16
V_NR2F2_03_M02783 TRANSFAC - 182525210 182525225 7.0E-06 GGACAAAGGTCAAAGA 16
V_EAR2_Q2_M01728 TRANSFAC + 182525201 182525214 1.0E-05 TTTCCTCTGTCTTT 14
V_EAR2_Q2_M01728 TRANSFAC + 182525207 182525220 9.0E-06 CTGTCTTTGACCTT 14
V_EAR2_Q2_M01728 TRANSFAC + 182525214 182525227 4.0E-06 TGACCTTTGTCCCC 14
V_GATA_C_M00203 TRANSFAC + 182525234 182525244 1.0E-06 AGATAAGGACT 11
V_HNF4A_03_M02220 TRANSFAC - 182525214 182525226 1.0E-06 GGGACAAAGGTCA 13
V_TR4_Q2_M01725 TRANSFAC + 182525212 182525222 7.0E-06 TTTGACCTTTG 11
V_PPAR_DR1_Q2_M00763 TRANSFAC + 182525214 182525226 0.0E+00 TGACCTTTGTCCC 13
V_COUPTF_Q6_M01036 TRANSFAC + 182525209 182525231 4.0E-06 GTCTTTGACCTTTGTCCCCCGTC 23
V_PU1_Q4_M01172 TRANSFAC - 182521953 182521971 6.0E-06 CACTTATTCTTCCTCTTGC 19
V_BARBIE_01_M00238 TRANSFAC + 182521204 182521218 7.0E-06 AGCAAAAGCTGCTTG 15
V_BARBIE_01_M00238 TRANSFAC + 182521410 182521424 4.0E-06 AGCAAAAGCTCGTGG 15
V_PPARGRXRA_01_M02262 TRANSFAC - 182525214 182525228 0.0E+00 GGGGGACAAAGGTCA 15
V_HNF4_01_B_M00411 TRANSFAC - 182525213 182525227 0.0E+00 GGGGACAAAGGTCAA 15
V_TEF_Q6_M00672 TRANSFAC - 182525246 182525257 2.0E-06 ATGTAATCATAA 12
V_NKX26_01_M01322 TRANSFAC - 182521961 182521976 5.0E-06 GGAGCCACTTATTCTT 16
V_SP1_Q6_M00196 TRANSFAC + 182521868 182521880 8.0E-06 GGGAGGCGGGGCC 13
V_SP1SP3_Q4_M01219 TRANSFAC - 182521324 182521334 5.0E-06 CCGCCTCCTCC 11
V_PPARG_03_M00528 TRANSFAC - 182525214 182525230 2.0E-06 ACGGGGGACAAAGGTCA 17
V_PEBP_Q6_M00984 TRANSFAC + 182521930 182521944 3.0E-06 ACTCACCACAAAAAG 15
V_DAX1_01_M01248 TRANSFAC - 182525208 182525227 3.0E-06 GGGGACAAAGGTCAAAGACA 20
V_HNF4A_Q6_01_M02016 TRANSFAC - 182525211 182525225 1.0E-06 GGACAAAGGTCAAAG 15
V_HNF4_DR1_Q3_M00764 TRANSFAC + 182525214 182525226 0.0E+00 TGACCTTTGTCCC 13
V_NR1B1_Q6_M02110 TRANSFAC - 182525212 182525221 0.0E+00 AAAGGTCAAA 10
V_HNF4A_02_M02868 TRANSFAC - 182520641 182520656 5.0E-06 TTTCTAAGTCCAAACT 16
V_TFIII_Q6_M00706 TRANSFAC + 182521445 182521453 6.0E-06 AGAGGGAGG 9
V_NEUROD_02_M01288 TRANSFAC - 182521945 182521956 6.0E-06 TTGCAGCTGGGT 12
V_ELF1_Q6_M00746 TRANSFAC + 182521953 182521964 7.0E-06 GCAAGAGGAAGA 12
V_HBP1_04_M02866 TRANSFAC - 182520616 182520632 7.0E-06 ACTCCCCATTGTTGAAT 17
V_DR1_Q3_M00762 TRANSFAC - 182525214 182525226 0.0E+00 GGGACAAAGGTCA 13
V_FOXL1_02_M02857 TRANSFAC - 182520374 182520389 4.0E-06 AAAGTCTAACAAAATG 16
V_HNF4_Q6_01_M01031 TRANSFAC - 182525213 182525226 1.0E-06 GGGACAAAGGTCAA 14
V_NUR77_Q5_M01217 TRANSFAC + 182525213 182525222 1.0E-06 TTGACCTTTG 10
V_HFH3_01_M00289 TRANSFAC - 182520424 182520436 7.0E-06 TGGTATTTATGTT 13
V_EWSR1FLI1_01_M02252 TRANSFAC + 182521448 182521465 6.0E-06 GGGAGGAAGCGCGGAGGG 18
V_FREAC4_01_M00292 TRANSFAC - 182525245 182525260 1.0E-05 CCAATGTAATCATAAG 16
V_RXRLXRB_01_M01198 TRANSFAC - 182525214 182525226 1.0E-06 GGGACAAAGGTCA 13
V_HNF4_01_M00134 TRANSFAC - 182525211 182525229 2.0E-06 CGGGGGACAAAGGTCAAAG 19
V_HOXD10_01_M01375 TRANSFAC - 182520371 182520387 6.0E-06 AGTCTAACAAAATGAAA 17
V_COUP_DR1_Q6_M00765 TRANSFAC + 182525214 182525226 0.0E+00 TGACCTTTGTCCC 13
PPARG_RXRA_MA0065.2 JASPAR - 182525214 182525228 0.0E+00 GGGGGACAAAGGTCA 15
V_PPARA_01_M00242 TRANSFAC - 182525214 182525233 8.0E-06 AAGACGGGGGACAAAGGTCA 20
V_TR4_03_M01782 TRANSFAC - 182525214 182525226 1.0E-06 GGGACAAAGGTCA 13
V_PPARG_01_M00512 TRANSFAC - 182525210 182525230 0.0E+00 ACGGGGGACAAAGGTCAAAGA 21
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL