Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ANKRD36 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 375248 ankyrin repeat domain 36 chr2 + 97774232 - 97779732 97779232 Transcription Factor Binding Sites   Download all TFBS in the ANKRD36 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 97778161 97778179 2.0E-06 TGGCCGCTAGAGGGCACGC 19 SRY_HMG_DBD_dimeric_16_1 SELEX + 97778274 97778289 3.0E-06 CACAATAGCGAATGTT 16 ZNF232_C2H2_full_monomeric_19_1 SELEX - 97778291 97778309 1.0E-06 GAGACAAATATAAATCAAG 19 ISL2_homeodomain_DBD_monomeric_8_1 SELEX - 97778146 97778153 1.0E-05 GCACTTAA 8 XBP1_bZIP_DBD_dimeric_14_1 SELEX + 97778623 97778636 5.0E-06 GAAGCCACGTCAGC 14 NFAT5_NFAT_DBD_dimeric_14_1 SELEX + 97778101 97778114 0.0E+00 ATGGAAAAATCCAA 14 CTCF_C2H2_full_monomeric_17_1 SELEX + 97778162 97778178 3.0E-06 CGTGCCCTCTAGCGGCC 17 SOX7_HMG_full_dimeric_16_1 SELEX + 97778274 97778289 1.0E-05 CACAATAGCGAATGTT 16 Nkx3-2_MA0122.1 JASPAR + 97778146 97778154 1.0E-05 TTAAGTGCA 9 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 97778178 97778187 9.0E-06 CAAATAAAAA 10 Sox11_HMG_DBD_dimeric_15_1 SELEX + 97778113 97778127 9.0E-06 AAGAATTCCTTTGTC 15 CPEB1_RRM_full_monomeric_8_1 SELEX + 97778180 97778187 4.0E-06 AATAAAAA 8 POU3F3_POU_DBD_dimeric_12_1 SELEX + 97778181 97778192 9.0E-06 ATAAAAAATAAA 12 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 97778182 97778194 5.0E-06 TAAAAAATAAAGA 13 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 97778181 97778194 8.0E-06 ATAAAAAATAAAGA 14 V_NFAT_Q4_01_M00935 TRANSFAC + 97778101 97778110 7.0E-06 ATGGAAAAAT 10 V_FOXP1_01_M00987 TRANSFAC - 97778178 97778197 7.0E-06 ATTTCTTTATTTTTTATTTG 20 V_FOXP1_01_M00987 TRANSFAC + 97780611 97780630 8.0E-06 TTACTCATGCTGTCTTTTAC 20 V_DBX1_01_M01483 TRANSFAC + 97778178 97778194 6.0E-06 CAAATAAAAAATAAAGA 17 V_DBX1_01_M01483 TRANSFAC + 97778182 97778198 2.0E-06 TAAAAAATAAAGAAATA 17 V_SREBP2_Q6_M01177 TRANSFAC + 97778859 97778870 5.0E-06 AGGCCATCCCAC 12 V_FOXD3_01_M00130 TRANSFAC - 97778179 97778190 9.0E-06 TATTTTTTATTT 12 V_HOXA13_02_M01297 TRANSFAC + 97778179 97778187 4.0E-06 AAATAAAAA 9 V_GABPA_04_M02858 TRANSFAC - 97778089 97778104 4.0E-06 CCATTTTCCTCATCAC 16 V_AP4_Q6_02_M01860 TRANSFAC - 97778930 97778942 1.0E-06 ACAGCTGCAGCCA 13 V_NFAT2_01_M01748 TRANSFAC + 97778101 97778109 3.0E-06 ATGGAAAAA 9 V_PAX5_02_M00144 TRANSFAC + 97779563 97779590 8.0E-06 ACCGTATCATCTGAAGAGGATCCACAGA 28 V_ELF4_04_M02850 TRANSFAC + 97778175 97778191 1.0E-06 GGCCAAATAAAAAATAA 17 V_HELIOSA_02_M01004 TRANSFAC + 97778099 97778109 2.0E-06 AAATGGAAAAA 11 V_ZFP105_03_M02827 TRANSFAC + 97778176 97778190 8.0E-06 GCCAAATAAAAAATA 15 V_ZFP105_03_M02827 TRANSFAC + 97778180 97778194 1.0E-06 AATAAAAAATAAAGA 15 V_HOXB13_01_M01467 TRANSFAC + 97778175 97778190 1.0E-05 GGCCAAATAAAAAATA 16 V_NFAT_Q6_M00302 TRANSFAC + 97778099 97778110 1.0E-06 AAATGGAAAAAT 12 V_MRF2_01_M00454 TRANSFAC + 97778271 97778284 4.0E-06 AATCACAATAGCGA 14 V_HNF1_Q6_01_M01011 TRANSFAC + 97778177 97778197 6.0E-06 CCAAATAAAAAATAAAGAAAT 21 V_HNF1_Q6_01_M01011 TRANSFAC - 97778291 97778311 6.0E-06 ATGAGACAAATATAAATCAAG 21 V_ASCL2_03_M02737 TRANSFAC - 97778558 97778574 1.0E-06 CTTGCCAGCTGCTCCTG 17 V_YY1_Q6_02_M01035 TRANSFAC - 97778098 97778108 7.0E-06 TTTTCCATTTT 11 V_SOX12_04_M02900 TRANSFAC - 97778117 97778132 0.0E+00 GGAAAGACAAAGGAAT 16 V_NCX_02_M01420 TRANSFAC + 97778182 97778198 8.0E-06 TAAAAAATAAAGAAATA 17 V_CTCF_02_M01259 TRANSFAC - 97778163 97778182 0.0E+00 ATTTGGCCGCTAGAGGGCAC 20 V_SOX11_03_M02795 TRANSFAC - 97778116 97778132 8.0E-06 GGAAAGACAAAGGAATT 17 V_CTCF_01_M01200 TRANSFAC - 97778161 97778180 1.0E-06 TTGGCCGCTAGAGGGCACGC 20 V_MTF1_06_M02882 TRANSFAC + 97778179 97778192 0.0E+00 AAATAAAAAATAAA 14 V_AP4_01_M00005 TRANSFAC - 97778929 97778946 2.0E-06 TGCCACAGCTGCAGCCAG 18 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 97779504 97779512 8.0E-06 GAGGGTGGG 9 V_FOXL1_04_M02753 TRANSFAC + 97778179 97778195 9.0E-06 AAATAAAAAATAAAGAA 17 V_AIRE_01_M00999 TRANSFAC - 97778105 97778130 1.0E-06 AAAGACAAAGGAATTCTTGGATTTTT 26 V_SRF_06_M02916 TRANSFAC + 97778179 97778195 7.0E-06 AAATAAAAAATAAAGAA 17 V_SRF_06_M02916 TRANSFAC + 97778180 97778196 4.0E-06 AATAAAAAATAAAGAAA 17 V_SOX2_Q6_M01272 TRANSFAC + 97778116 97778131 1.0E-06 AATTCCTTTGTCTTTC 16 V_SOX2_Q6_M01272 TRANSFAC - 97778270 97778285 8.0E-06 TTCGCTATTGTGATTA 16 V_IRF1_01_M00062 TRANSFAC - 97780623 97780635 8.0E-06 CAATAGTAAAAGA 13 V_PBX1_Q3_M02028 TRANSFAC - 97778292 97778300 6.0E-06 ATAAATCAA 9 V_TCF3_05_M02920 TRANSFAC + 97778175 97778189 0.0E+00 GGCCAAATAAAAAAT 15 V_TCF3_05_M02920 TRANSFAC - 97778294 97778308 7.0E-06 AGACAAATATAAATC 15 V_SMAD1_01_M01590 TRANSFAC - 97778119 97778130 0.0E+00 AAAGACAAAGGA 12 V_AP2_Q3_M00800 TRANSFAC + 97779035 97779050 9.0E-06 GGCACCAGGCGGAGAA 16 V_NANOG_02_M01247 TRANSFAC - 97778115 97778134 2.0E-06 AAGGAAAGACAAAGGAATTC 20 V_NANOG_02_M01247 TRANSFAC + 97778180 97778199 8.0E-06 AATAAAAAATAAAGAAATAC 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.