Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

KCND1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 3750 potassium voltage-gated channel, Shal-related subfamily, member 1 chrX - 48827751 - 48833251 48828251 Transcription Factor Binding Sites   Download all TFBS in the KCND1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SPIC_ETS_full_monomeric_14_1 SELEX + 48823781 48823794 7.0E-06 AGCATGAGGAAGTC 14 SPIC_ETS_full_monomeric_14_1 SELEX - 48828782 48828795 0.0E+00 AAAAACAGGAAGTC 14 GATA5_GATA_DBD_monomeric_8_1 SELEX - 48828892 48828899 7.0E-06 AGATAAGA 8 GATA4_GATA_DBD_monomeric_8_1 SELEX - 48828892 48828899 7.0E-06 AGATAAGA 8 SPIB_ETS_DBD_monomeric_14_1 SELEX - 48828782 48828795 0.0E+00 AAAAACAGGAAGTC 14 EOMES_TBX_DBD_monomeric_13_1 SELEX - 48828918 48828930 8.0E-06 GAGGTGTGATTTG 13 TBR1_TBX_full_monomeric_11_1 SELEX - 48828920 48828930 6.0E-06 GAGGTGTGATT 11 Gfi_MA0038.1 JASPAR + 48828918 48828927 7.0E-06 CAAATCACAC 10 Gata1_MA0035.2 JASPAR - 48828891 48828901 1.0E-06 ACAGATAAGAG 11 GATA3_GATA_full_monomeric_8_1 SELEX - 48828892 48828899 7.0E-06 AGATAAGA 8 TBX21_TBX_full_monomeric_10_1 SELEX - 48828921 48828930 6.0E-06 GAGGTGTGAT 10 ZNF282_C2H2_DBD_monomeric_17_1 SELEX - 48828806 48828822 5.0E-06 CATTCCCTTTACCCTCA 17 TBX20_TBX_DBD_monomeric_15_1 SELEX - 48828919 48828933 4.0E-06 GAGGAGGTGTGATTT 15 ZNF410_C2H2_DBD_monomeric_17_1 SELEX - 48828967 48828983 9.0E-06 GGCATTCCATAATCAGT 17 SPI1_ETS_full_monomeric_14_1 SELEX - 48828782 48828795 0.0E+00 AAAAACAGGAAGTC 14 V_CDPCR1_01_M00104 TRANSFAC - 48828547 48828556 1.0E-05 CATCGATCGG 10 V_SPI1_01_M01203 TRANSFAC - 48828779 48828795 1.0E-06 AAAAACAGGAAGTCCCG 17 V_FOXP3_Q4_M00992 TRANSFAC - 48828521 48828537 4.0E-06 GTGCTGCTGATTCAGGC 17 V_EVI1_05_M00082 TRANSFAC + 48828796 48828806 1.0E-05 AGATATGAAAT 11 V_GATA2_02_M00348 TRANSFAC - 48828892 48828901 2.0E-06 ACAGATAAGA 10 V_TBR2_01_M01774 TRANSFAC - 48828921 48828929 6.0E-06 AGGTGTGAT 9 V_ZFP740_03_M02834 TRANSFAC + 48828506 48828521 3.0E-06 CCCCCACCCCCACTCG 16 V_SP1_02_M01303 TRANSFAC - 48828260 48828270 3.0E-06 GGGGCGGGGAG 11 V_TAL1_GATA1_01_M02243 TRANSFAC - 48828893 48828910 1.0E-05 TGGATATGGACAGATAAG 18 V_BARBIE_01_M00238 TRANSFAC + 48828373 48828387 7.0E-06 CTACAAAGCTGGTTG 15 V_TAL1_Q6_M00993 TRANSFAC + 48823704 48823713 7.0E-06 ACCATCTGCT 10 V_GC_01_M00255 TRANSFAC - 48828361 48828374 9.0E-06 AGGAGGCGGAGTCT 14 V_EGR1_04_M02848 TRANSFAC + 48828821 48828836 6.0E-06 TGTAGAGGGGGACAAT 16 Tal1_Gata1_MA0140.1 JASPAR - 48828893 48828910 1.0E-05 TGGATATGGACAGATAAG 18 V_SPIB_01_M01204 TRANSFAC + 48823781 48823797 9.0E-06 AGCATGAGGAAGTCACA 17 V_SPIB_01_M01204 TRANSFAC - 48828779 48828795 1.0E-06 AAAAACAGGAAGTCCCG 17 V_GATA1_09_M02254 TRANSFAC - 48828891 48828901 1.0E-06 ACAGATAAGAG 11 V_CETS1P54_01_M00032 TRANSFAC - 48828782 48828791 9.0E-06 ACAGGAAGTC 10 V_MAFK_Q3_M02022 TRANSFAC + 48823743 48823753 6.0E-06 TGAGTCAGCTA 11 V_MAF_Q6_01_M00983 TRANSFAC - 48828523 48828533 7.0E-06 TGCTGATTCAG 11 V_GATA4_Q3_M00632 TRANSFAC - 48828888 48828899 2.0E-06 AGATAAGAGAGA 12 V_ELF1_Q6_M00746 TRANSFAC - 48828783 48828794 1.0E-06 AAAACAGGAAGT 12 V_GATA1_05_M00346 TRANSFAC - 48828892 48828901 1.0E-05 ACAGATAAGA 10 V_TAL1_01_M01591 TRANSFAC + 48828889 48828901 2.0E-06 CTCTCTTATCTGT 13 V_SIRT6_01_M01797 TRANSFAC - 48828892 48828899 7.0E-06 AGATAAGA 8 V_GATA3_02_M00350 TRANSFAC - 48828892 48828901 8.0E-06 ACAGATAAGA 10 V_GFI1B_01_M01058 TRANSFAC + 48828918 48828929 9.0E-06 CAAATCACACCT 12 V_BDP1_01_M01796 TRANSFAC - 48829001 48829012 3.0E-06 GGGTTTGAACCC 12 V_NRF2_Q4_M00821 TRANSFAC - 48828522 48828534 1.0E-06 CTGCTGATTCAGG 13 V_ASCL2_04_M02841 TRANSFAC + 48828258 48828273 9.0E-06 CTCTCCCCGCCCCTCT 16 V_ZFP281_01_M01597 TRANSFAC - 48828507 48828517 1.0E-06 TGGGGGTGGGG 11 V_GATA2_03_M00349 TRANSFAC - 48828892 48828901 1.0E-06 ACAGATAAGA 10 V_NFE2_Q6_M02104 TRANSFAC + 48823741 48823756 8.0E-06 CCTGAGTCAGCTAGAA 16 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 48827869 48827876 1.0E-05 TGTGGTTT 8 V_SP1_Q2_01_M00933 TRANSFAC + 48828262 48828271 7.0E-06 CCCCGCCCCT 10 V_BRF1_01_M01747 TRANSFAC + 48829001 48829013 0.0E+00 GGGTTCAAACCCC 13 V_SPIB_03_M02076 TRANSFAC + 48823785 48823794 7.0E-06 TGAGGAAGTC 10 V_GATA1_06_M00347 TRANSFAC - 48828892 48828901 2.0E-06 ACAGATAAGA 10 V_HOXC9_01_M01416 TRANSFAC - 48828565 48828580 9.0E-06 TGGGGCCATTAACTGA 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.