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ATPAF1-AS1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 374973 testis expressed 38 chr1 + 47132496 - 47137996 47137496 Transcription Factor Binding Sites   Download all TFBS in the ATPAF1-AS1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX + 47139597 47139607 1.0E-06 AATGAGTCATC 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX - 47139597 47139607 1.0E-06 GATGACTCATT 11 NHLH1_MA0048.1 JASPAR + 47133860 47133871 1.0E-06 GCGCAGCTGCGC 12 NHLH1_MA0048.1 JASPAR - 47133860 47133871 1.0E-06 GCGCAGCTGCGC 12 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 47139564 47139575 3.0E-06 TAAATCAACATA 12 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 47141501 47141512 5.0E-06 TTAGTAAACATT 12 FOXD1_MA0031.1 JASPAR + 47141504 47141511 7.0E-06 GTAAACAT 8 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 47139565 47139575 5.0E-06 TAAATCAACAT 11 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 47141501 47141511 8.0E-06 TTAGTAAACAT 11 EWSR1-FLI1_MA0149.1 JASPAR - 47133267 47133284 8.0E-06 GGGAGGAGGGCATCAAAG 18 Pax4_MA0068.1 JASPAR + 47141621 47141650 8.0E-06 AAACCAAAACCAAAACCAAACTCACTATCC 30 TCF7L1_HMG_full_monomeric_12_1 SELEX + 47141604 47141615 6.0E-06 AAAGGTAAAAGG 12 IRF1_MA0050.1 JASPAR + 47141620 47141631 9.0E-06 AAAACCAAAACC 12 IRF1_MA0050.1 JASPAR + 47141626 47141637 9.0E-06 AAAACCAAAACC 12 Ar_MA0007.1 JASPAR - 47138544 47138565 3.0E-06 CAAAGTACAATGAGACCCACAC 22 Foxq1_MA0040.1 JASPAR - 47141503 47141513 7.0E-06 TAATGTTTACT 11 SP1_MA0079.2 JASPAR + 47133682 47133691 9.0E-06 CCCCTCCTCC 10 SP1_MA0079.2 JASPAR - 47134153 47134162 9.0E-06 CCCCTCCTCC 10 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX - 47138555 47138570 2.0E-06 GATTCCAAAGTACAAT 16 ATF4_bZIP_DBD_dimeric_13_1 SELEX - 47141357 47141369 0.0E+00 GTATGATGCAACA 13 Atf4_bZIP_DBD_dimeric_14_1 SELEX - 47141357 47141370 1.0E-06 TGTATGATGCAACA 14 SOX9_HMG_full_dimeric_16_3 SELEX - 47141404 47141419 3.0E-06 ATGACTGTGGTGTCAT 16 SOX14_HMG_DBD_dimeric_15_1 SELEX + 47139639 47139653 8.0E-06 CTGAAATGCATTCTT 15 IRF9_IRF_full_trimeric_15_1 SELEX + 47141623 47141637 3.0E-06 ACCAAAACCAAAACC 15 Evi1_MA0029.1 JASPAR + 47141512 47141525 3.0E-06 TATACAAGATAGTA 14 JDP2_bZIP_full_dimeric_9_1 SELEX + 47139598 47139606 4.0E-06 ATGAGTCAT 9 JDP2_bZIP_full_dimeric_9_1 SELEX - 47139598 47139606 2.0E-06 ATGACTCAT 9 IRF4_IRF_full_dimeric_15_1 SELEX + 47141618 47141632 7.0E-06 TTAAAACCAAAACCA 15 IRF4_IRF_full_dimeric_15_1 SELEX + 47141624 47141638 3.0E-06 CCAAAACCAAAACCA 15 IRF5_IRF_full_dimeric_14_1 SELEX + 47141624 47141637 1.0E-06 CCAAAACCAAAACC 14 IRF3_IRF_full_trimeric_21_1 SELEX + 47141618 47141638 1.0E-06 TTAAAACCAAAACCAAAACCA 21 NHLH1_bHLH_full_dimeric_10_1 SELEX + 47133861 47133870 2.0E-06 CGCAGCTGCG 10 NHLH1_bHLH_full_dimeric_10_1 SELEX - 47133861 47133870 2.0E-06 CGCAGCTGCG 10 FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 47141501 47141511 9.0E-06 TTAGTAAACAT 11 RREB1_MA0073.1 JASPAR + 47141623 47141642 8.0E-06 ACCAAAACCAAAACCAAACT 20 TEAD1_MA0090.1 JASPAR + 47141369 47141380 1.0E-06 CACATTCCTGAG 12 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 47141504 47141517 4.0E-06 GTAAACATTATACA 14 V_FOXP1_01_M00987 TRANSFAC - 47141620 47141639 8.0E-06 TTGGTTTTGGTTTTGGTTTT 20 V_MEIS1BHOXA9_02_M00421 TRANSFAC + 47133254 47133267 1.0E-05 TGACACTATTAGTC 14 V_HNF3B_01_M00131 TRANSFAC - 47141501 47141515 6.0E-06 TATAATGTTTACTAA 15 V_AP1_Q2_M00173 TRANSFAC - 47139597 47139607 8.0E-06 GATGACTCATT 11 V_E2A_Q6_01_M02088 TRANSFAC + 47133935 47133947 2.0E-06 GGCCACCTGCAGG 13 V_STAT5A_Q6_M01890 TRANSFAC + 47139702 47139714 3.0E-06 TTATTTCTAATAA 13 V_DBX1_01_M01483 TRANSFAC - 47139705 47139721 3.0E-06 TTGTGAATTATTAGAAA 17 V_TCF3_01_M01594 TRANSFAC + 47139650 47139662 2.0E-06 TCTTTGTTATTAT 13 V_BACH2_01_M00490 TRANSFAC + 47139597 47139607 3.0E-06 AATGAGTCATC 11 V_XFD1_01_M00267 TRANSFAC + 47141501 47141514 2.0E-06 TTAGTAAACATTAT 14 V_FOXA2_04_M02749 TRANSFAC + 47141499 47141515 1.0E-06 TTTTAGTAAACATTATA 17 V_BCL6B_03_M02740 TRANSFAC + 47139703 47139718 3.0E-06 TATTTCTAATAATTCA 16 V_ZFX_01_M01593 TRANSFAC - 47134037 47134052 1.0E-05 GCGCGGGCCGCGGGCC 16 V_GATA3_03_M00351 TRANSFAC - 47139657 47139666 7.0E-06 ATAGATAATA 10 V_FOXJ1_04_M02854 TRANSFAC - 47139650 47139664 6.0E-06 AGATAATAACAAAGA 15 V_EVI1_02_M00079 TRANSFAC + 47141513 47141523 4.0E-06 ATACAAGATAG 11 V_SOX11_04_M02899 TRANSFAC - 47139705 47139718 8.0E-06 TGAATTATTAGAAA 14 V_IRF3_05_M02767 TRANSFAC + 47141619 47141632 9.0E-06 TAAAACCAAAACCA 14 V_FOXJ1_03_M02750 TRANSFAC + 47141501 47141516 8.0E-06 TTAGTAAACATTATAC 16 V_SP1_03_M02281 TRANSFAC + 47133682 47133691 9.0E-06 CCCCTCCTCC 10 V_SP1_03_M02281 TRANSFAC - 47134153 47134162 9.0E-06 CCCCTCCTCC 10 V_SP1_02_M01303 TRANSFAC + 47134146 47134156 3.0E-06 GGGGCGGGGAG 11 V_STAT4_Q4_M01666 TRANSFAC + 47139706 47139719 9.0E-06 TTCTAATAATTCAC 14 V_BCL6_02_M01185 TRANSFAC - 47141568 47141581 3.0E-06 TGCTTTCCTAAGTT 14 V_AP1_Q6_M00174 TRANSFAC - 47139597 47139607 0.0E+00 GATGACTCATT 11 V_WT1_Q6_01_M02036 TRANSFAC + 47133998 47134007 4.0E-06 CGCCCCCGCC 10 V_TAL1_Q6_M00993 TRANSFAC - 47133735 47133744 3.0E-06 TCCAGCTGCT 10 V_BACH1_01_M00495 TRANSFAC + 47139595 47139609 1.0E-06 AAAATGAGTCATCAC 15 V_FOXA2_02_M02853 TRANSFAC - 47139649 47139663 0.0E+00 GATAATAACAAAGAA 15 V_HNF1_Q6_M00790 TRANSFAC - 47139704 47139721 5.0E-06 TTGTGAATTATTAGAAAT 18 V_XFD3_01_M00269 TRANSFAC + 47141501 47141514 0.0E+00 TTAGTAAACATTAT 14 V_RFX1_01_M00280 TRANSFAC - 47139686 47139702 9.0E-06 ATGTAAAGAGGCAACCA 17 V_KROX_Q6_M00982 TRANSFAC + 47133996 47134009 2.0E-06 GCCGCCCCCGCCTC 14 V_AP1_Q6_01_M00925 TRANSFAC - 47139598 47139606 4.0E-06 ATGACTCAT 9 V_FOXK1_04_M02856 TRANSFAC - 47139651 47139665 6.0E-06 TAGATAATAACAAAG 15 V_MAZ_Q6_01_M02023 TRANSFAC + 47134150 47134163 4.0E-06 CGGGGAGGAGGGGG 14 V_EGR1_Q6_M01873 TRANSFAC - 47133997 47134006 4.0E-06 GCGGGGGCGG 10 V_HNF1_Q6_01_M01011 TRANSFAC + 47139703 47139723 8.0E-06 TATTTCTAATAATTCACAAGA 21 V_JUNDM2_04_M02876 TRANSFAC + 47139594 47139609 3.0E-06 CAAAATGAGTCATCAC 16 V_JUNDM2_04_M02876 TRANSFAC - 47139595 47139610 1.0E-06 CGTGATGACTCATTTT 16 V_OCT1_04_M00138 TRANSFAC + 47141520 47141542 8.0E-06 ATAGTACAAGGCAAAAGAAAACA 23 V_GR_01_M00955 TRANSFAC - 47139715 47139741 9.0E-06 ATATCCATTTGGCAGTGTTCTTGTGAA 27 V_SP1SP3_Q4_M01219 TRANSFAC + 47134003 47134013 5.0E-06 CCGCCTCCTCC 11 V_SP1SP3_Q4_M01219 TRANSFAC - 47134153 47134163 1.0E-05 CCCCCTCCTCC 11 V_SP1SP3_Q4_M01219 TRANSFAC + 47134219 47134229 5.0E-06 CCGCCTCCTCC 11 V_EVI1_Q3_M02002 TRANSFAC - 47141514 47141522 4.0E-06 TATCTTGTA 9 V_SOX12_04_M02900 TRANSFAC + 47141285 47141300 8.0E-06 CCATAAAGAAAGGAAT 16 V_TEF_01_M01305 TRANSFAC + 47141369 47141380 1.0E-06 CACATTCCTGAG 12 V_AP1_C_M00199 TRANSFAC + 47139598 47139606 8.0E-06 ATGAGTCAT 9 V_XFD2_01_M00268 TRANSFAC + 47141501 47141514 5.0E-06 TTAGTAAACATTAT 14 V_NCX_02_M01420 TRANSFAC - 47139705 47139721 9.0E-06 TTGTGAATTATTAGAAA 17 V_STAT4_Q5_M02117 TRANSFAC - 47139705 47139714 6.0E-06 TTATTAGAAA 10 V_ISGF3G_03_M02771 TRANSFAC + 47141619 47141633 5.0E-06 TAAAACCAAAACCAA 15 V_ISGF3G_03_M02771 TRANSFAC + 47141625 47141639 4.0E-06 CAAAACCAAAACCAA 15 V_AP1_01_M00517 TRANSFAC + 47139596 47139608 1.0E-06 AAATGAGTCATCA 13 V_SOX11_03_M02795 TRANSFAC - 47139646 47139662 0.0E+00 ATAATAACAAAGAATGC 17 V_AP1_Q2_01_M00924 TRANSFAC - 47139594 47139605 5.0E-06 TGACTCATTTTG 12 V_HNF4A_02_M02868 TRANSFAC - 47138553 47138568 4.0E-06 TTCCAAAGTACAATGA 16 V_AP1_Q4_01_M00926 TRANSFAC + 47139599 47139606 1.0E-05 TGAGTCAT 8 V_EVI1_06_M00011 TRANSFAC + 47141515 47141523 4.0E-06 ACAAGATAG 9 V_TFIII_Q6_M00706 TRANSFAC - 47134258 47134266 6.0E-06 AGAGGGAGG 9 V_BCL6B_04_M02844 TRANSFAC - 47141484 47141499 8.0E-06 AGAGCCTCCCCATAAA 16 V_FAC1_01_M00456 TRANSFAC + 47141622 47141635 6.0E-06 AACCAAAACCAAAA 14 V_ZBTB3_03_M02825 TRANSFAC + 47139620 47139636 9.0E-06 AGCCACACTGCACTATG 17 V_FOXL1_04_M02753 TRANSFAC + 47141499 47141515 5.0E-06 TTTTAGTAAACATTATA 17 V_GATA3_02_M00350 TRANSFAC - 47139657 47139666 8.0E-06 ATAGATAATA 10 V_HDX_01_M01333 TRANSFAC - 47139697 47139713 7.0E-06 TATTAGAAATAATGTAA 17 V_TEF1_Q6_03_M01817 TRANSFAC - 47141370 47141378 9.0E-06 CAGGAATGT 9 V_PARP_Q3_M01211 TRANSFAC - 47139702 47139711 8.0E-06 TTAGAAATAA 10 V_TCF7_04_M02921 TRANSFAC - 47139702 47139716 1.0E-06 AATTATTAGAAATAA 15 V_BDP1_01_M01796 TRANSFAC - 47141614 47141625 7.0E-06 GGTTTTAAACCC 12 V_FRA1_Q5_M01267 TRANSFAC + 47139599 47139606 1.0E-05 TGAGTCAT 8 V_FPM315_01_M01587 TRANSFAC - 47134008 47134019 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 47134150 47134161 2.0E-06 CGGGGAGGAGGG 12 V_VDR_Q6_M00961 TRANSFAC - 47133231 47133242 9.0E-06 CCCATTGAACCC 12 V_FOX_Q2_M00809 TRANSFAC + 47139563 47139575 3.0E-06 CTATGTTGATTTA 13 V_FOX_Q2_M00809 TRANSFAC - 47141501 47141513 2.0E-06 TAATGTTTACTAA 13 V_E47_01_M00002 TRANSFAC - 47133933 47133947 9.0E-06 CCTGCAGGTGGCCGG 15 V_EWSR1FLI1_01_M02252 TRANSFAC - 47133267 47133284 8.0E-06 GGGAGGAGGGCATCAAAG 18 V_SATB1_01_M01232 TRANSFAC - 47139702 47139713 0.0E+00 TATTAGAAATAA 12 V_SATB1_01_M01232 TRANSFAC + 47139703 47139714 5.0E-06 TATTTCTAATAA 12 V_SOX2_Q6_M01272 TRANSFAC + 47139646 47139661 3.0E-06 GCATTCTTTGTTATTA 16 V_NFE2_01_M00037 TRANSFAC - 47139598 47139608 6.0E-06 TGATGACTCAT 11 V_IRF1_01_M00062 TRANSFAC + 47141619 47141631 3.0E-06 TAAAACCAAAACC 13 V_IRF1_01_M00062 TRANSFAC + 47141625 47141637 1.0E-06 CAAAACCAAAACC 13 V_SOX12_03_M02796 TRANSFAC + 47139650 47139663 4.0E-06 TCTTTGTTATTATC 14 V_GFI1_Q6_01_M02010 TRANSFAC + 47141478 47141487 7.0E-06 CTCTGATTTA 10 V_LTF_Q6_M01692 TRANSFAC - 47133578 47133586 1.0E-05 GTCACTTGC 9 V_RNF96_01_M01199 TRANSFAC + 47134038 47134047 7.0E-06 GCCCGCGGCC 10 V_PBX1_04_M01357 TRANSFAC - 47139659 47139675 4.0E-06 GCATACATCATAGATAA 17 V_STAT1_05_M01260 TRANSFAC - 47139696 47139717 4.0E-06 GAATTATTAGAAATAATGTAAA 22 V_SMAD1_01_M01590 TRANSFAC - 47139649 47139660 0.0E+00 AATAACAAAGAA 12 V_SMAD1_01_M01590 TRANSFAC + 47141287 47141298 6.0E-06 ATAAAGAAAGGA 12 V_NANOG_02_M01247 TRANSFAC - 47139645 47139664 2.0E-06 AGATAATAACAAAGAATGCA 20 V_GATA1_06_M00347 TRANSFAC - 47139657 47139666 1.0E-05 ATAGATAATA 10 V_TCF4_01_M01705 TRANSFAC + 47133266 47133274 5.0E-06 TCTTTGATG 9

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