Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

KIF7 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 374654 kinesin family member 7 chr15 - 90198182 - 90203682 90198682 Transcription Factor Binding Sites   Download all TFBS in the KIF7 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU2F1_POU_DBD_dimeric_14_1 SELEX + 90200989 90201002 9.0E-06 AAAGAATAATTATA 14 DLX1_homeodomain_DBD_monomeric_10_1 SELEX + 90200993 90201002 2.0E-06 AATAATTATA 10 DLX1_homeodomain_DBD_monomeric_10_1 SELEX - 90200993 90201002 8.0E-06 TATAATTATT 10 RARB_nuclearreceptor_full_dimeric_16_1 SELEX - 90200965 90200980 6.0E-06 GAAGCTCATGATGTCA 16 POU3F3_POU_DBD_monomeric_12_1 SELEX + 90200990 90201001 6.0E-06 AAGAATAATTAT 12 LHX6_homeodomain_full_dimeric_16_1 SELEX + 90200995 90201010 2.0E-06 TAATTATAGTTACTTG 16 PDX1_homeodomain_DBD_dimeric_18_1 SELEX - 90200994 90201011 4.0E-06 TCAAGTAACTATAATTAT 18 ZNF435_C2H2_full_dimeric_18_1 SELEX - 90198240 90198257 1.0E-06 GGGGTTGTCAGAGCACCT 18 SRY_HMG_DBD_dimeric_16_1 SELEX + 90200990 90201005 5.0E-06 AAGAATAATTATAGTT 16 SRY_HMG_DBD_dimeric_16_1 SELEX - 90200990 90201005 1.0E-06 AACTATAATTATTCTT 16 EWSR1-FLI1_MA0149.1 JASPAR - 90197631 90197648 2.0E-06 GAGAGGAGGCGAGGAAAG 18 Pax4_MA0068.1 JASPAR + 90197564 90197593 3.0E-06 AAAAAAAAAAGACAAGCCTTAAATCAGGCC 30 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX + 90200994 90201007 7.0E-06 ATAATTATAGTTAC 14 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX - 90200994 90201007 9.0E-06 GTAACTATAATTAT 14 HOXB5_homeodomain_DBD_monomeric_10_1 SELEX + 90200993 90201002 3.0E-06 AATAATTATA 10 T_MA0009.1 JASPAR + 90197663 90197673 4.0E-06 CTAGGTGTTAC 11 ATF7_bZIP_DBD_dimeric_14_1 SELEX - 90198695 90198708 1.0E-05 CGATGACGGCATCG 14 SP1_MA0079.2 JASPAR + 90198713 90198722 7.0E-06 CCCCGCCCCC 10 POU2F3_POU_DBD_dimeric_12_1 SELEX + 90200990 90201001 7.0E-06 AAGAATAATTAT 12 znf143_MA0088.1 JASPAR - 90201114 90201133 1.0E-05 GTCCACCCATACTGCCCTTC 20 SOX7_HMG_full_dimeric_16_1 SELEX + 90200990 90201005 3.0E-06 AAGAATAATTATAGTT 16 POU3F1_POU_DBD_monomeric_12_2 SELEX + 90200990 90201001 9.0E-06 AAGAATAATTAT 12 SOX21_HMG_DBD_dimeric_16_1 SELEX + 90200990 90201005 5.0E-06 AAGAATAATTATAGTT 16 PLAG1_MA0163.1 JASPAR + 90198760 90198773 4.0E-06 GGGGCGCTCGGGGG 14 POU3F3_POU_DBD_dimeric_12_1 SELEX + 90200990 90201001 3.0E-06 AAGAATAATTAT 12 Sox1_HMG_DBD_dimeric_15_1 SELEX + 90199783 90199797 5.0E-06 TGCAATACCAGTGTG 15 HOXC12_homeodomain_DBD_monomeric_11_1 SELEX - 90201059 90201069 7.0E-06 AGTAGTAAAAT 11 MNX1_homeodomain_DBD_monomeric_10_1 SELEX + 90200993 90201002 5.0E-06 AATAATTATA 10 BATF3_bZIP_DBD_dimeric_14_1 SELEX + 90198695 90198708 5.0E-06 CGATGCCGTCATCG 14 BATF3_bZIP_DBD_dimeric_14_1 SELEX - 90198695 90198708 2.0E-06 CGATGACGGCATCG 14 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 90197561 90197573 5.0E-06 GAAAAAAAAAAAA 13 RREB1_MA0073.1 JASPAR + 90198720 90198739 2.0E-06 CCCCAAACCAGCCCCCCCCT 20 Irx3_homeodomain_DBD_dimeric_12_1 SELEX + 90201069 90201080 4.0E-06 TTACATGGAAAA 12 DLX5_homeodomain_FL_monomeric_8_1 SELEX + 90200994 90201001 4.0E-06 ATAATTAT 8 DLX5_homeodomain_FL_monomeric_8_1 SELEX - 90200994 90201001 4.0E-06 ATAATTAT 8 V_FOXP1_01_M00987 TRANSFAC - 90197563 90197582 6.0E-06 AGGCTTGTCTTTTTTTTTTT 20 V_TCF3_01_M01594 TRANSFAC - 90197563 90197575 7.0E-06 TCTTTTTTTTTTT 13 V_BCL6_Q3_01_M02085 TRANSFAC + 90198889 90198898 2.0E-06 TTTTCTAGAA 10 V_MEQCJUN_02_M02048 TRANSFAC + 90198696 90198706 6.0E-06 GATGCCGTCAT 11 V_SOX30_03_M02804 TRANSFAC + 90200989 90201004 5.0E-06 AAAGAATAATTATAGT 16 V_DLX3_01_M01400 TRANSFAC + 90200989 90201005 1.0E-06 AAAGAATAATTATAGTT 17 V_DLX3_01_M01400 TRANSFAC - 90200990 90201006 1.0E-06 TAACTATAATTATTCTT 17 V_FOXJ2_02_M00423 TRANSFAC - 90197547 90197560 2.0E-06 CCCTTAATATTTTG 14 V_NKX25_Q6_M02108 TRANSFAC + 90201104 90201114 1.0E-05 GACACTTGCAG 11 V_EAR2_Q2_M01728 TRANSFAC - 90200983 90200996 7.0E-06 TATTCTTTGCTCTT 14 V_P53_DECAMER_Q2_M00761 TRANSFAC + 90197573 90197582 7.0E-06 AGACAAGCCT 10 V_SP1_03_M02281 TRANSFAC + 90198713 90198722 7.0E-06 CCCCGCCCCC 10 V_DLX2_01_M01468 TRANSFAC - 90200989 90201004 8.0E-06 ACTATAATTATTCTTT 16 V_PU1_Q4_M01172 TRANSFAC - 90197554 90197572 8.0E-06 TTTTTTTTTTTCCCCTTAA 19 V_SOX21_03_M02803 TRANSFAC + 90200990 90201005 3.0E-06 AAGAATAATTATAGTT 16 V_SOX21_03_M02803 TRANSFAC - 90200993 90201008 8.0E-06 AGTAACTATAATTATT 16 V_TCFAP2E_04_M02926 TRANSFAC + 90197556 90197569 2.0E-06 AAGGGGAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 90197562 90197575 6.0E-06 AAAAAAAAAAAAGA 14 V_TCFAP2E_04_M02926 TRANSFAC + 90201005 90201018 3.0E-06 TACTTGAAACAAAT 14 V_ELF4_04_M02850 TRANSFAC + 90197559 90197575 2.0E-06 GGGAAAAAAAAAAAAGA 17 V_ELF4_04_M02850 TRANSFAC + 90197560 90197576 3.0E-06 GGAAAAAAAAAAAAGAC 17 V_ZFP105_03_M02827 TRANSFAC + 90197560 90197574 6.0E-06 GGAAAAAAAAAAAAG 15 V_ZFP105_03_M02827 TRANSFAC + 90197561 90197575 6.0E-06 GAAAAAAAAAAAAGA 15 V_ZFP105_03_M02827 TRANSFAC + 90197562 90197576 2.0E-06 AAAAAAAAAAAAGAC 15 V_CART1_01_M00416 TRANSFAC + 90200992 90201009 2.0E-06 GAATAATTATAGTTACTT 18 V_CART1_01_M00416 TRANSFAC - 90200992 90201009 4.0E-06 AAGTAACTATAATTATTC 18 V_ARID5A_03_M02736 TRANSFAC - 90197544 90197557 4.0E-06 TTAATATTTTGAAT 14 V_SOX1_04_M02906 TRANSFAC - 90200989 90201003 6.0E-06 CTATAATTATTCTTT 15 V_MRF2_01_M00454 TRANSFAC + 90197544 90197557 8.0E-06 ATTCAAAATATTAA 14 V_HOXD12_01_M01380 TRANSFAC - 90201056 90201072 1.0E-05 GTAAGTAGTAAAATCAG 17 V_HOXA3_07_M02869 TRANSFAC + 90197546 90197559 1.0E-05 TCAAAATATTAAGG 14 V_SP1_Q6_M00196 TRANSFAC - 90198711 90198723 4.0E-06 GGGGGGCGGGGGT 13 V_IRF3_Q3_M01279 TRANSFAC - 90197556 90197568 9.0E-06 TTTTTTTCCCCTT 13 V_HOXC12_01_M01437 TRANSFAC - 90201056 90201072 1.0E-05 GTAAGTAGTAAAATCAG 17 V_MUSCLE_INI_B_M00321 TRANSFAC + 90198614 90198634 4.0E-06 TCCGGCCCACACTCACCTGCC 21 V_ATF3_Q6_M00513 TRANSFAC + 90198695 90198708 9.0E-06 CGATGCCGTCATCG 14 V_FOXM1_01_M00630 TRANSFAC + 90201015 90201023 7.0E-06 AAATTGAGT 9 V_CETS1P54_03_M01078 TRANSFAC + 90201085 90201100 8.0E-06 AGTGCCGGAAGTTGCA 16 V_SP4_Q5_M01273 TRANSFAC + 90198712 90198722 5.0E-06 CCCCCGCCCCC 11 V_DLX7_01_M01486 TRANSFAC - 90200990 90201006 5.0E-06 TAACTATAATTATTCTT 17 V_MTF1_06_M02882 TRANSFAC + 90197562 90197575 3.0E-06 AAAAAAAAAAAAGA 14 V_OSR2_04_M02889 TRANSFAC + 90201060 90201075 7.0E-06 TTTTACTACTTACATG 16 V_MSX2_01_M01393 TRANSFAC + 90200989 90201005 3.0E-06 AAAGAATAATTATAGTT 17 V_NFAT2_02_M01749 TRANSFAC + 90201069 90201079 6.0E-06 TTACATGGAAA 11 V_SRF_06_M02916 TRANSFAC + 90197557 90197573 6.0E-06 AGGGGAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC + 90197558 90197574 2.0E-06 GGGGAAAAAAAAAAAAG 17 V_SRF_06_M02916 TRANSFAC + 90197559 90197575 0.0E+00 GGGAAAAAAAAAAAAGA 17 V_SRF_06_M02916 TRANSFAC + 90197560 90197576 0.0E+00 GGAAAAAAAAAAAAGAC 17 V_SRF_06_M02916 TRANSFAC + 90197561 90197577 0.0E+00 GAAAAAAAAAAAAGACA 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 90197631 90197648 2.0E-06 GAGAGGAGGCGAGGAAAG 18 V_SP1_Q2_01_M00933 TRANSFAC + 90198713 90198722 4.0E-06 CCCCGCCCCC 10 V_TCF3_05_M02920 TRANSFAC + 90197556 90197570 3.0E-06 AAGGGGAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 90197557 90197571 0.0E+00 AGGGGAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 90197558 90197572 0.0E+00 GGGGAAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 90197559 90197573 4.0E-06 GGGAAAAAAAAAAAA 15 V_GBX1_01_M01371 TRANSFAC + 90200989 90201005 4.0E-06 AAAGAATAATTATAGTT 17 V_GBX1_01_M01371 TRANSFAC - 90200990 90201006 9.0E-06 TAACTATAATTATTCTT 17 V_PAX4_04_M00380 TRANSFAC + 90197564 90197593 7.0E-06 AAAAAAAAAAGACAAGCCTTAAATCAGGCC 30 V_SOX14_03_M02798 TRANSFAC - 90200993 90201008 9.0E-06 AGTAACTATAATTATT 16 V_HSF1_Q6_01_M02017 TRANSFAC + 90198886 90198899 1.0E-06 TTATTTTCTAGAAT 14 V_HOXC8_01_M01321 TRANSFAC + 90200989 90201004 3.0E-06 AAAGAATAATTATAGT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.