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C12orf42 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 374470 chromosome 12 open reading frame 42 chr12 - 103889246 - 103894749 103889746 Transcription Factor Binding Sites   Download all TFBS in the C12orf42 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints TBX20_TBX_full_monomeric_11_1 SELEX - 103889868 103889878 2.0E-06 GAGGTGTGAAA 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX + 103893583 103893593 1.0E-06 AATGAGTCATC 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX - 103893583 103893593 1.0E-06 GATGACTCATT 11 CTCF_MA0139.1 JASPAR + 103890135 103890153 8.0E-06 CCAACAGCAGGGGGCAGAG 19 PITX3_homeodomain_DBD_monomeric_9_1 SELEX - 103889390 103889398 5.0E-06 CTTAATCCC 9 TBR1_TBX_DBD_monomeric_10_1 SELEX - 103889868 103889877 1.0E-06 AGGTGTGAAA 10 Tp53_p53l_DBD_dimeric_18_2 SELEX + 103887158 103887175 1.0E-05 CACATGCCTCTGCTTGCT 18 SOX8_HMG_full_dimeric_17_1 SELEX + 103891409 103891425 2.0E-06 CATCAATTTCAGCAAAT 17 Pax4_MA0068.1 JASPAR + 103892802 103892831 1.0E-06 AAAATAAATTAAAAAAAAAAGTCTTAACTC 30 Pax4_MA0068.1 JASPAR + 103892803 103892832 7.0E-06 AAATAAATTAAAAAAAAAAGTCTTAACTCA 30 Pax4_MA0068.1 JASPAR + 103892804 103892833 4.0E-06 AATAAATTAAAAAAAAAAGTCTTAACTCAC 30 Pax4_MA0068.1 JASPAR + 103892807 103892836 3.0E-06 AAATTAAAAAAAAAAGTCTTAACTCACACA 30 SPIB_ETS_DBD_monomeric_14_1 SELEX + 103889069 103889082 1.0E-05 AAAGAGAGGAACTT 14 PITX1_homeodomain_full_monomeric_8_1 SELEX - 103889390 103889397 1.0E-05 TTAATCCC 8 TCF7L1_HMG_full_monomeric_12_1 SELEX - 103893592 103893603 1.0E-06 AAAGTTCAAAGA 12 LEF1_HMG_DBD_monomeric_15_1 SELEX - 103893589 103893603 6.0E-06 AAAGTTCAAAGATGA 15 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 103889870 103889881 7.0E-06 TGAGAGGTGTGA 12 EOMES_TBX_DBD_monomeric_13_1 SELEX - 103889866 103889878 1.0E-06 GAGGTGTGAAAGT 13 FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX + 103887180 103887191 5.0E-06 GTTCCCCACACT 12 SP1_MA0079.2 JASPAR + 103889188 103889197 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR + 103889211 103889220 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR - 103889382 103889391 7.0E-06 CCCCGCCCCC 10 TBR1_TBX_full_monomeric_11_1 SELEX - 103889868 103889878 0.0E+00 GAGGTGTGAAA 11 SOX15_HMG_full_dimeric_15_1 SELEX + 103887076 103887090 6.0E-06 CACACTCACAATGTT 15 SOX15_HMG_full_dimeric_15_1 SELEX + 103887186 103887200 6.0E-06 CACACTCACAATGTT 15 Tcf7_HMG_DBD_monomeric_12_1 SELEX - 103893592 103893603 1.0E-06 AAAGTTCAAAGA 12 TBX21_TBX_full_monomeric_10_1 SELEX - 103889869 103889878 3.0E-06 GAGGTGTGAA 10 TBX2_TBX_full_monomeric_11_1 SELEX - 103889868 103889878 1.0E-06 GAGGTGTGAAA 11 RHOXF1_homeodomain_full_monomeric_8_1 SELEX - 103889390 103889397 1.0E-05 TTAATCCC 8 PITX1_homeodomain_full_monomeric_9_1 SELEX + 103890193 103890201 5.0E-06 TTTAATCCA 9 JDP2_bZIP_full_dimeric_9_1 SELEX + 103893584 103893592 4.0E-06 ATGAGTCAT 9 JDP2_bZIP_full_dimeric_9_1 SELEX - 103893584 103893592 2.0E-06 ATGACTCAT 9 TBX21_TBX_full_dimeric_19_1 SELEX - 103889870 103889888 2.0E-06 TGTCAGATGAGAGGTGTGA 19 GSC2_homeodomain_DBD_monomeric_10_1 SELEX - 103889389 103889398 2.0E-06 CTTAATCCCC 10 TBX20_TBX_DBD_monomeric_15_1 SELEX - 103889867 103889881 1.0E-06 TGAGAGGTGTGAAAG 15 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX + 103887070 103887080 3.0E-06 TCTCCCCACAC 11 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX + 103887180 103887190 1.0E-06 GTTCCCCACAC 11 FOXO6_forkhead_DBD_putatively-multimeric_14_1 SELEX + 103887180 103887193 5.0E-06 GTTCCCCACACTCA 14 FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX + 103887070 103887081 5.0E-06 TCTCCCCACACT 12 FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX + 103887180 103887191 1.0E-06 GTTCCCCACACT 12 RREB1_MA0073.1 JASPAR - 103889433 103889452 7.0E-06 CCCCGCCCCAACCCCCACCT 20 ZIC1_C2H2_full_monomeric_14_1 SELEX - 103890137 103890150 3.0E-06 TGCCCCCTGCTGTT 14 V_AP1_Q2_M00173 TRANSFAC - 103893583 103893593 8.0E-06 GATGACTCATT 11 V_GEN_INI_B_M00315 TRANSFAC - 103889117 103889124 1.0E-05 CCTCATTT 8 V_TCF3_01_M01594 TRANSFAC + 103893592 103893604 8.0E-06 TCTTTGAACTTTA 13 V_BACH2_01_M00490 TRANSFAC + 103893583 103893593 3.0E-06 AATGAGTCATC 11 V_EOMES_03_M02747 TRANSFAC - 103889865 103889881 0.0E+00 TGAGAGGTGTGAAAGTT 17 V_TBR2_01_M01774 TRANSFAC - 103889869 103889877 3.0E-06 AGGTGTGAA 9 V_PLAG1_02_M01973 TRANSFAC - 103889961 103889976 9.0E-06 CCCCCTTGCCGCCCCC 16 V_EAR2_Q2_M01728 TRANSFAC + 103893589 103893602 8.0E-06 TCATCTTTGAACTT 14 V_SP1_03_M02281 TRANSFAC + 103889188 103889197 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC + 103889211 103889220 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC - 103889382 103889391 7.0E-06 CCCCGCCCCC 10 V_GM497_04_M02864 TRANSFAC - 103889397 103889412 9.0E-06 AGACGCACACGCTCCT 16 V_HNF1_C_M00206 TRANSFAC + 103889338 103889354 5.0E-06 TGTCAATGCATCACCTG 17 V_AP1_Q6_M00174 TRANSFAC - 103893583 103893593 0.0E+00 GATGACTCATT 11 V_PITX1_Q6_M01826 TRANSFAC + 103891420 103891430 1.0E-05 GCAAATAATCC 11 V_TAL1_Q6_M00993 TRANSFAC + 103889325 103889334 7.0E-06 ACCATCTGCT 10 V_BACH1_01_M00495 TRANSFAC + 103893581 103893595 1.0E-06 GCAATGAGTCATCTT 15 V_ZNF219_01_M01122 TRANSFAC + 103889203 103889214 1.0E-05 CTCCCCCACCCC 12 V_CRX_Q4_M00623 TRANSFAC - 103889388 103889400 5.0E-06 TCCTTAATCCCCC 13 V_GEN_INI3_B_M00314 TRANSFAC - 103889117 103889124 1.0E-05 CCTCATTT 8 V_TCF3_04_M02816 TRANSFAC - 103893588 103893604 9.0E-06 TAAAGTTCAAAGATGAC 17 V_KROX_Q6_M00982 TRANSFAC + 103889201 103889214 8.0E-06 CCCTCCCCCACCCC 14 V_KROX_Q6_M00982 TRANSFAC - 103889444 103889457 1.0E-05 TCCTCCCCCGCCCC 14 V_ZBP89_Q4_M01816 TRANSFAC + 103889201 103889210 4.0E-06 CCCTCCCCCA 10 V_AP1_Q6_01_M00925 TRANSFAC - 103893584 103893592 4.0E-06 ATGACTCAT 9 V_SP1_Q6_M00196 TRANSFAC - 103889209 103889221 8.0E-06 AGGGGGAGGGGTG 13 V_MAZ_Q6_01_M02023 TRANSFAC - 103889207 103889220 1.0E-06 GGGGGAGGGGTGGG 14 V_JUNDM2_04_M02876 TRANSFAC + 103893580 103893595 7.0E-06 GGCAATGAGTCATCTT 16 V_JUNDM2_04_M02876 TRANSFAC - 103893581 103893596 5.0E-06 AAAGATGACTCATTGC 16 V_PITX3_01_M01343 TRANSFAC + 103889387 103889402 4.0E-06 CGGGGGATTAAGGAGC 16 V_TCF7_03_M02817 TRANSFAC - 103893588 103893604 1.0E-05 TAAAGTTCAAAGATGAC 17 V_RREB1_01_M00257 TRANSFAC - 103889434 103889447 2.0E-06 CCCCAACCCCCACC 14 V_AP1_C_M00199 TRANSFAC + 103893584 103893592 8.0E-06 ATGAGTCAT 9 V_AP1_01_M00517 TRANSFAC + 103893582 103893594 1.0E-06 CAATGAGTCATCT 13 V_CTCF_02_M01259 TRANSFAC + 103890132 103890151 8.0E-06 CAGCCAACAGCAGGGGGCAG 20 V_NR1B1_Q6_M02110 TRANSFAC - 103893594 103893603 2.0E-06 AAAGTTCAAA 10 V_CTCF_01_M01200 TRANSFAC + 103890134 103890153 5.0E-06 GCCAACAGCAGGGGGCAGAG 20 V_TBX5_01_M01019 TRANSFAC - 103889868 103889879 2.0E-06 AGAGGTGTGAAA 12 V_TAL1BETAITF2_01_M00070 TRANSFAC - 103889322 103889337 5.0E-06 GCGAGCAGATGGTCCC 16 V_GR_Q6_02_M01836 TRANSFAC + 103887192 103887204 7.0E-06 CACAATGTTCTGG 13 V_SP4_Q5_M01273 TRANSFAC + 103889187 103889197 5.0E-06 GCCCCTCCCCC 11 V_SP4_Q5_M01273 TRANSFAC - 103889382 103889392 5.0E-06 CCCCCGCCCCC 11 V_AP1_Q4_01_M00926 TRANSFAC + 103893585 103893592 1.0E-05 TGAGTCAT 8 V_TAL1ALPHAE47_01_M00066 TRANSFAC - 103889322 103889337 2.0E-06 GCGAGCAGATGGTCCC 16 NR1H2_RXRA_MA0115.1 JASPAR - 103893587 103893603 8.0E-06 AAAGTTCAAAGATGACT 17 V_GEN_INI2_B_M00313 TRANSFAC - 103889117 103889124 1.0E-05 CCTCATTT 8 V_SMAD3_03_M02794 TRANSFAC + 103893600 103893616 5.0E-06 CTTTATCAGACATAAGA 17 V_FRA1_Q5_M01267 TRANSFAC + 103893585 103893592 1.0E-05 TGAGTCAT 8 V_NRF2_Q4_M00821 TRANSFAC - 103887113 103887125 3.0E-06 ATCCTGAGTCACT 13 V_NRF2_Q4_M00821 TRANSFAC - 103887223 103887235 3.0E-06 ATCCTGAGTCACT 13 V_TCF4_Q5_M00671 TRANSFAC + 103893547 103893554 1.0E-05 CCTTTGAA 8 V_PITX2_Q2_M00482 TRANSFAC + 103890193 103890203 1.0E-06 TTTAATCCAAA 11 V_FOX_Q2_M00809 TRANSFAC - 103891417 103891429 6.0E-06 GATTATTTGCTGA 13 V_STAT6_02_M00500 TRANSFAC + 103887333 103887340 1.0E-05 GATTTCCT 8 V_ZFP281_01_M01597 TRANSFAC - 103889188 103889198 7.0E-06 CGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC - 103889200 103889210 9.0E-06 TGGGGGAGGGA 11 V_ZFP281_01_M01597 TRANSFAC - 103889211 103889221 3.0E-06 AGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC + 103889436 103889446 9.0E-06 TGGGGGTTGGG 11 V_ZFP281_04_M02831 TRANSFAC + 103889198 103889212 5.0E-06 GCTCCCTCCCCCACC 15 V_ZFP281_04_M02831 TRANSFAC - 103889434 103889448 6.0E-06 GCCCCAACCCCCACC 15 V_PUR1_Q4_M01721 TRANSFAC + 103890168 103890176 6.0E-06 GGGACAGTG 9 V_FOXJ2_01_M00422 TRANSFAC + 103891414 103891431 4.0E-06 ATTTCAGCAAATAATCCT 18 V_HNF3B_Q6_M02014 TRANSFAC - 103891419 103891427 1.0E-05 TTATTTGCT 9 V_PIT1_Q6_M00802 TRANSFAC - 103890088 103890105 1.0E-06 TATTCAAAATGGTTTACA 18 V_SP1_Q2_01_M00933 TRANSFAC - 103889382 103889391 4.0E-06 CCCCGCCCCC 10 V_AP2ALPHA_02_M01045 TRANSFAC + 103887140 103887154 8.0E-06 TCTGCCTCAGGGCCT 15 V_UF1H3BETA_Q6_M01068 TRANSFAC - 103889187 103889200 1.0E-06 AGCGGGGGAGGGGC 14 V_UF1H3BETA_Q6_M01068 TRANSFAC + 103889446 103889459 6.0E-06 GGCGGGGGAGGAGA 14 V_MAFK_04_M02880 TRANSFAC - 103887059 103887073 2.0E-06 GAGAATATTGCAAGA 15 V_CMAF_01_M01070 TRANSFAC - 103891409 103891427 4.0E-06 TTATTTGCTGAAATTGATG 19 V_SP1_Q4_01_M00932 TRANSFAC - 103889186 103889198 8.0E-06 CGGGGGAGGGGCC 13 V_SP1_Q4_01_M00932 TRANSFAC - 103889209 103889221 8.0E-06 AGGGGGAGGGGTG 13 V_GFI1_Q6_01_M02010 TRANSFAC + 103887329 103887338 7.0E-06 ATGTGATTTC 10 V_OBOX5_01_M01381 TRANSFAC - 103891419 103891435 8.0E-06 CTCAAGGATTATTTGCT 17 V_DMRT1_01_M01146 TRANSFAC - 103887080 103887094 4.0E-06 CTGAAACATTGTGAG 15 V_OBOX6_06_M03067 TRANSFAC + 103891419 103891435 8.0E-06 AGCAAATAATCCTTGAG 17 V_TCF11_01_M00285 TRANSFAC + 103893588 103893600 8.0E-06 GTCATCTTTGAAC 13 V_PPARG_01_M00512 TRANSFAC - 103893585 103893605 9.0E-06 ATAAAGTTCAAAGATGACTCA 21

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.