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KCNA10 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 3744 potassium voltage-gated channel, shaker-related subfamily, member 10 chr1 - 111061297 - 111066797 111061797 Transcription Factor Binding Sites   Download all TFBS in the KCNA10 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Arx_homeodomain_DBD_dimeric_13_1 SELEX - 111062265 111062277 6.0E-06 AAAATGAAATTAC 13 SRY_HMG_DBD_dimeric_16_1 SELEX + 111062219 111062234 7.0E-06 AGCAATTGGAATTTTT 16 SRY_HMG_DBD_dimeric_16_1 SELEX - 111062219 111062234 9.0E-06 AAAAATTCCAATTGCT 16 Alx1_homeodomain_DBD_dimeric_13_1 SELEX - 111062265 111062277 9.0E-06 AAAATGAAATTAC 13 SOX9_HMG_DBD_monomeric_9_1 SELEX - 111062169 111062177 4.0E-06 AAACAATAG 9 IRF7_IRF_DBD_trimeric_17_1 SELEX - 111062222 111062238 9.0E-06 CAAAAAAAATTCCAATT 17 RARG_nuclearreceptor_full_dimeric_18_1 SELEX - 111062055 111062072 4.0E-06 GGGGTCATTTAGAGGACA 18 PROP1_homeodomain_full_dimeric_11_1 SELEX - 111062266 111062276 8.0E-06 AAATGAAATTA 11 ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX - 111062055 111062072 3.0E-06 GGGGTCATTTAGAGGACA 18 ALX3_homeodomain_full_dimeric_13_1 SELEX - 111062265 111062277 6.0E-06 AAAATGAAATTAC 13 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 111062173 111062186 3.0E-06 GTTGACAAAAAACA 14 Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX - 111062055 111062071 3.0E-06 GGGTCATTTAGAGGACA 17 DRGX_homeodomain_DBD_dimeric_13_1 SELEX - 111062265 111062277 8.0E-06 AAAATGAAATTAC 13 RARA_nuclearreceptor_full_dimeric_17_1 SELEX - 111062055 111062071 1.0E-06 GGGTCATTTAGAGGACA 17 PHOX2B_homeodomain_full_dimeric_11_1 SELEX - 111062266 111062276 9.0E-06 AAATGAAATTA 11 Alx4_homeodomain_DBD_dimeric_13_1 SELEX - 111062265 111062277 3.0E-06 AAAATGAAATTAC 13 SOX7_HMG_full_dimeric_16_1 SELEX - 111062219 111062234 8.0E-06 AAAAATTCCAATTGCT 16 Uncx_homeodomain_DBD_dimeric_13_1 SELEX + 111062265 111062277 8.0E-06 GTAATTTCATTTT 13 SOX21_HMG_DBD_dimeric_16_1 SELEX + 111062219 111062234 1.0E-05 AGCAATTGGAATTTTT 16 FOXI1_forkhead_full_dimeric_17_1 SELEX - 111062172 111062188 0.0E+00 AAGTTGACAAAAAACAA 17 RORA_nuclearreceptor_DBD_dimeric_20_1 SELEX - 111062055 111062074 2.0E-06 GAGGGGTCATTTAGAGGACA 20 SOX9_MA0077.1 JASPAR - 111062169 111062177 7.0E-06 AAACAATAG 9 V_FOXP1_01_M00987 TRANSFAC + 111062163 111062182 1.0E-06 TTATAGCTATTGTTTTTTGT 20 RXR_RAR_DR5_MA0159.1 JASPAR - 111062055 111062071 2.0E-06 GGGTCATTTAGAGGACA 17 V_APOLYA_B_M00310 TRANSFAC - 111062221 111062235 2.0E-06 AAAAAATTCCAATTG 15 V_NF1_Q6_01_M00806 TRANSFAC - 111062234 111062250 2.0E-06 TTGGACTCAGGCCAAAA 17 V_SOX30_03_M02804 TRANSFAC - 111062165 111062180 6.0E-06 AAAAAACAATAGCTAT 16 V_NF1A_Q6_M02103 TRANSFAC + 111058747 111058762 3.0E-06 CAGGCTATTGGCCAAT 16 V_HMGIY_Q3_M01010 TRANSFAC + 111062223 111062237 0.0E+00 ATTGGAATTTTTTTT 15 V_NKX29_01_M01352 TRANSFAC - 111062195 111062211 4.0E-06 TCTAAAGTGCTTGTTAT 17 V_BCL6_01_M01183 TRANSFAC + 111062221 111062236 9.0E-06 CAATTGGAATTTTTTT 16 V_PROP1_01_M01294 TRANSFAC + 111062266 111062276 2.0E-06 TAATTTCATTT 11 V_FOXJ2_02_M00423 TRANSFAC - 111062165 111062178 6.0E-06 AAAACAATAGCTAT 14 V_EGR_Q6_M00807 TRANSFAC - 111065774 111065784 6.0E-06 GTGGGGGCAGC 11 V_IRF2_Q6_M01882 TRANSFAC - 111062265 111062280 1.0E-05 CTCAAAATGAAATTAC 16 V_ATF3_Q6_01_M01863 TRANSFAC - 111058767 111058777 9.0E-06 ATTGAGTCATC 11 V_AP2_Q6_01_M00915 TRANSFAC - 111058690 111058702 4.0E-06 CAGGCCCCAGGCT 13 V_STAT6_01_M00494 TRANSFAC - 111062078 111062085 7.0E-06 TATTTCCA 8 V_ATF4_Q2_M00514 TRANSFAC + 111058767 111058778 5.0E-06 GATGACTCAATG 12 V_PAX_Q6_M00808 TRANSFAC + 111062077 111062087 1.0E-06 CTGGAAATAAC 11 V_AP1_Q6_M00174 TRANSFAC + 111058767 111058777 1.0E-06 GATGACTCAAT 11 V_SOX7_03_M02807 TRANSFAC - 111062162 111062183 0.0E+00 GACAAAAAACAATAGCTATAAT 22 V_ZFP105_03_M02827 TRANSFAC - 111062169 111062183 0.0E+00 GACAAAAAACAATAG 15 V_ARID5A_03_M02736 TRANSFAC + 111062431 111062444 4.0E-06 CTAATATTTCTTTC 14 V_AP1_Q6_01_M00925 TRANSFAC + 111058768 111058776 2.0E-06 ATGACTCAA 9 V_PAX2_01_M00098 TRANSFAC + 111057897 111057915 3.0E-06 ATTTGTCAAACATTATTCT 19 V_RREB1_01_M00257 TRANSFAC - 111065860 111065873 0.0E+00 CCCCAAATAACCCC 14 V_AP1_Q4_01_M00926 TRANSFAC - 111058768 111058775 1.0E-05 TGAGTCAT 8 V_AP1_01_M00517 TRANSFAC - 111058766 111058778 1.0E-06 CATTGAGTCATCA 13 V_SOX11_03_M02795 TRANSFAC - 111062165 111062181 1.0E-05 CAAAAAACAATAGCTAT 17 V_SOX9_B1_M00410 TRANSFAC - 111062167 111062180 2.0E-06 AAAAAACAATAGCT 14 V_AP1_Q2_01_M00924 TRANSFAC + 111058769 111058780 2.0E-06 TGACTCAATGGG 12 V_NKX23_01_M01457 TRANSFAC - 111062196 111062211 3.0E-06 TCTAAAGTGCTTGTTA 16 V_NKX32_02_M01482 TRANSFAC + 111062197 111062213 9.0E-06 AACAAGCACTTTAGAAA 17 V_SOX15_03_M02799 TRANSFAC - 111062165 111062181 3.0E-06 CAAAAAACAATAGCTAT 17 V_MYOD_Q6_01_M00929 TRANSFAC + 111058790 111058807 2.0E-06 TCGAGGCAGGTGGACAAG 18 V_HDX_01_M01333 TRANSFAC + 111062275 111062291 0.0E+00 TTTGAGAAATCATTTTA 17 V_FRA1_Q5_M01267 TRANSFAC - 111058768 111058775 1.0E-05 TGAGTCAT 8 V_RXR_RAR_01_M02272 TRANSFAC - 111062055 111062071 2.0E-06 GGGTCATTTAGAGGACA 17 V_IRF1_Q6_01_M01881 TRANSFAC + 111062266 111062279 4.0E-06 TAATTTCATTTTGA 14 V_TCFAP2B_04_M02924 TRANSFAC + 111062530 111062544 2.0E-06 TTAACCTCAGGCAAA 15 V_SOX8_03_M02808 TRANSFAC + 111062165 111062181 1.0E-06 ATAGCTATTGTTTTTTG 17 V_SRF_06_M02916 TRANSFAC - 111062170 111062186 2.0E-06 GTTGACAAAAAACAATA 17 V_FOXO1_01_M00473 TRANSFAC - 111062171 111062180 3.0E-06 AAAAAACAAT 10 V_SOX2_Q6_M01272 TRANSFAC + 111062165 111062180 2.0E-06 ATAGCTATTGTTTTTT 16 V_SRY_05_M02917 TRANSFAC - 111062166 111062182 1.0E-06 ACAAAAAACAATAGCTA 17 V_MEF2_01_M00006 TRANSFAC - 111062092 111062107 1.0E-05 CCTTCAAAACAACTCT 16 V_MAFK_04_M02880 TRANSFAC - 111062222 111062236 6.0E-06 AAAAAAATTCCAATT 15 V_EHF_07_M02849 TRANSFAC - 111062255 111062270 9.0E-06 AATTACTTCCTATGGA 16 V_SREBP1_Q5_M01173 TRANSFAC - 111065819 111065833 9.0E-06 TGACTCACCCCACCC 15 V_TCF3_05_M02920 TRANSFAC - 111062228 111062242 0.0E+00 AGGCCAAAAAAAATT 15 V_SMAD1_01_M01590 TRANSFAC - 111062168 111062179 3.0E-06 AAAAACAATAGC 12 V_NF1_Q6_M00193 TRANSFAC - 111058746 111058763 7.0E-06 AATTGGCCAATAGCCTGT 18 V_NF1_Q6_M00193 TRANSFAC + 111062234 111062251 3.0E-06 TTTTGGCCTGAGTCCAAG 18 V_NANOG_02_M01247 TRANSFAC - 111062164 111062183 7.0E-06 GACAAAAAACAATAGCTATA 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.