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RAET1G


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
353091 retinoic acid early transcript 1G chr6 -150243714 - 150249214 150244214

Transcription Factor Binding Sites

 
Download all TFBS in the RAET1G promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
SOX4_HMG_DBD_dimeric_16_1 SELEX - 150244490 150244505 8.0E-06 AAAAAATTGCGGTGAT 16
SOX10_HMG_full_dimeric_16_1 SELEX - 150247542 150247557 2.0E-06 AAAGGTGTTCAGTGTT 16
IRF7_IRF_DBD_dimeric_14_1 SELEX - 150244501 150244514 8.0E-06 TACAAAATGAAAAA 14
SOX9_HMG_full_dimeric_16_1 SELEX - 150247542 150247557 8.0E-06 AAAGGTGTTCAGTGTT 16
SOX8_HMG_DBD_dimeric_16_1 SELEX - 150247542 150247557 1.0E-06 AAAGGTGTTCAGTGTT 16
SOX8_HMG_full_dimeric_17_1 SELEX - 150244489 150244505 4.0E-06 AAAAAATTGCGGTGATG 17
NFYA_MA0060.1 JASPAR + 150244324 150244339 5.0E-06 GCTAGCCAATCAGGTG 16
POU3F4_POU_DBD_monomeric_9_1 SELEX - 150247574 150247582 7.0E-06 AATGCAAAT 9
Pax4_MA0068.1 JASPAR - 150244754 150244783 1.0E-05 AAAAAAGAAAAGAAAGAAAAACCAACCAAC 30
Pax4_MA0068.1 JASPAR - 150244756 150244785 6.0E-06 AAAAAAAAGAAAAGAAAGAAAAACCAACCA 30
Tcfcp2l1_MA0145.1 JASPAR + 150244404 150244417 9.0E-06 CCTGCTTCAGCCAG 14
ZNF740_C2H2_full_monomeric_10_1 SELEX + 150247077 150247086 7.0E-06 CCCCCCCCAT 10
FOXI1_MA0042.1 JASPAR + 150244741 150244752 1.0E-06 GTTTGTTTGTTT 12
FOXI1_MA0042.1 JASPAR + 150244745 150244756 7.0E-06 GTTTGTTTGGTT 12
NFIX_NFI_full_monomeric_9_2 SELEX - 150247518 150247526 8.0E-06 AATGCCAAT 9
Foxd3_MA0041.1 JASPAR + 150244741 150244752 0.0E+00 GTTTGTTTGTTT 12
PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 150247306 150247320 7.0E-06 AGAAAGGGAGAGGAA 15
FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 150244740 150244752 6.0E-06 AAACAAACAAACC 13
FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 150244744 150244756 4.0E-06 AACCAAACAAACA 13
RREB1_MA0073.1 JASPAR - 150244742 150244761 2.0E-06 CAACCAACCAAACAAACAAA 20
RREB1_MA0073.1 JASPAR - 150244746 150244765 1.0E-06 AAACCAACCAACCAAACAAA 20
SOX9_HMG_full_dimeric_17_1 SELEX - 150244489 150244505 6.0E-06 AAAAAATTGCGGTGATG 17
V_FOXP1_01_M00987 TRANSFAC + 150244755 150244774 9.0E-06 TTGGTTGGTTTTTCTTTCTT 20
V_SMAD3_Q6_01_M01888 TRANSFAC - 150244212 150244224 6.0E-06 ATTCAGACAGCCT 13
V_NFY_Q6_M00185 TRANSFAC + 150244326 150244336 1.0E-06 TAGCCAATCAG 11
V_FOXD3_01_M00130 TRANSFAC + 150244741 150244752 0.0E+00 GTTTGTTTGTTT 12
V_SP1_Q6_01_M00931 TRANSFAC - 150244284 150244293 4.0E-06 GGGGCGGGGC 10
V_DR4_Q2_M00965 TRANSFAC + 150244247 150244263 3.0E-06 TAAACTCCAGTAAGCCC 17
V_OCT1_01_M00135 TRANSFAC - 150247569 150247587 7.0E-06 AGAAGAATGCAAATCGCAG 19
V_HNF3_Q6_01_M01012 TRANSFAC + 150244739 150244756 5.0E-06 AGGTTTGTTTGTTTGGTT 18
V_HNF3_Q6_01_M01012 TRANSFAC + 150244743 150244760 2.0E-06 TTGTTTGTTTGGTTGGTT 18
V_HFH4_01_M00742 TRANSFAC + 150244741 150244753 2.0E-06 GTTTGTTTGTTTG 13
V_BRN2_01_M00145 TRANSFAC - 150244503 150244518 6.0E-06 TTAATACAAAATGAAA 16
V_TCFAP2E_04_M02926 TRANSFAC - 150244498 150244511 1.0E-06 AAAATGAAAAAATT 14
V_REX1_01_M01695 TRANSFAC + 150247477 150247486 7.0E-06 TCAGCCATTT 10
V_NFY_C_M00209 TRANSFAC - 150244324 150244337 0.0E+00 CCTGATTGGCTAGC 14
V_GC_01_M00255 TRANSFAC - 150247442 150247455 2.0E-06 AGGGGGTGGGGCCT 14
V_SPI1_03_M02078 TRANSFAC - 150246504 150246513 1.0E-05 AGAGGAACTG 10
V_HNF3G_Q4_M02015 TRANSFAC + 150244744 150244751 7.0E-06 TGTTTGTT 8
V_OLF1_01_M00261 TRANSFAC + 150247521 150247542 9.0E-06 GGCATTTCCCTGAGGGCTGTGA 22
V_HNF3_Q6_M00791 TRANSFAC - 150244742 150244754 2.0E-06 CCAAACAAACAAA 13
V_OCT1_04_M00138 TRANSFAC - 150244501 150244523 3.0E-06 TTGGATTAATACAAAATGAAAAA 23
V_KLF7_03_M02773 TRANSFAC + 150244281 150244296 7.0E-06 TCTGCCCCGCCCCTCG 16
V_OCT1_B_M00342 TRANSFAC - 150247573 150247582 2.0E-06 AATGCAAATC 10
V_OCT_Q6_M00795 TRANSFAC + 150247572 150247582 1.0E-05 CGATTTGCATT 11
V_NEUROD_02_M01288 TRANSFAC + 150246614 150246625 2.0E-06 CTCCTGCTGTCT 12
V_SP4_Q5_M01273 TRANSFAC + 150244284 150244294 8.0E-06 GCCCCGCCCCT 11
V_HFH8_01_M00294 TRANSFAC + 150244741 150244753 4.0E-06 GTTTGTTTGTTTG 13
V_CIZ_01_M00734 TRANSFAC - 150244498 150244506 5.0E-06 GAAAAAATT 9
V_ALPHACP1_01_M00687 TRANSFAC + 150244326 150244336 3.0E-06 TAGCCAATCAG 11
V_OCT1_Q6_M00195 TRANSFAC - 150247571 150247585 1.0E-06 AAGAATGCAAATCGC 15
V_EBNA1_01_M01745 TRANSFAC + 150246476 150246491 6.0E-06 GGCAGCCTCTCCTTCC 16
V_NFY_01_M00287 TRANSFAC + 150244324 150244339 5.0E-06 GCTAGCCAATCAGGTG 16
V_FOX_Q2_M00809 TRANSFAC + 150244741 150244753 2.0E-06 GTTTGTTTGTTTG 13
V_ZFP281_01_M01597 TRANSFAC - 150247445 150247455 5.0E-06 AGGGGGTGGGG 11
V_DMRT2_01_M01147 TRANSFAC + 150244511 150244526 2.0E-06 TGTATTAATCCAATGT 16
V_HFH3_01_M00289 TRANSFAC + 150244741 150244753 2.0E-06 GTTTGTTTGTTTG 13
V_FOXJ2_01_M00422 TRANSFAC - 150244739 150244756 1.0E-06 AACCAAACAAACAAACCT 18
V_HNF3B_Q6_M02014 TRANSFAC + 150244743 150244751 1.0E-05 TTGTTTGTT 9
V_SP1_Q2_01_M00933 TRANSFAC + 150244285 150244294 7.0E-06 CCCCGCCCCT 10
V_UF1H3BETA_Q6_M01068 TRANSFAC - 150247444 150247457 2.0E-06 GGAGGGGGTGGGGC 14
V_NFYA_Q5_M02106 TRANSFAC + 150244326 150244339 3.0E-06 TAGCCAATCAGGTG 14
V_SP1_Q4_01_M00932 TRANSFAC - 150247443 150247455 3.0E-06 AGGGGGTGGGGCC 13
V_TAACC_B_M00331 TRANSFAC - 150247469 150247491 9.0E-06 CGCTGAAATGGCTGATCCCAAAC 23
V_ARID5A_04_M02840 TRANSFAC - 150244505 150244521 9.0E-06 GGATTAATACAAAATGA 17
V_NANOG_02_M01247 TRANSFAC - 150247573 150247592 3.0E-06 TCAGAAGAAGAATGCAAATC 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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