TFBS - View Gene

HCN1

Entrez	Description	Chrom.	Strand	Promoter (Start - Stop)	TSS
348980	hyperpolarization activated cyclic nucleotide-gated potassium channel 1	chr5	-	45695720 - 45701220	45696220

Transcription Factor Binding Sites

Download all TFBS in the HCN1 promoter

Motif	Source	Strand	Start	Stop	PValue	Match Sequence	Overlap w/ Footprints
CTCF_MA0139.1	JASPAR	-	45696510	45696528	0.0E+00	TGGCCAACAGAGGGCAGCC	19
Foxa2_MA0047.2	JASPAR	-	45695213	45695224	1.0E-06	TGTTTACTCAGA	12
FOXA1_MA0148.1	JASPAR	-	45695214	45695224	1.0E-06	TGTTTACTCAG	11
FOXJ3_forkhead_DBD_dimeric_14_1	SELEX	-	45694529	45694542	9.0E-06	GTGAAAAATCCACA	14
GLI2_C2H2_DBD_monomeric_12_1	SELEX	+	45695375	45695386	1.0E-05	GAGACCACACTT	12
REST_MA0138.2	JASPAR	+	45694554	45694574	0.0E+00	TTCAGAACTGTGGACAGCTCC	21
V_CEBPG_Q6_M00622	TRANSFAC	-	45695435	45695447	9.0E-06	TTTACTTCAGAGA	13
V_XFD1_01_M00267	TRANSFAC	+	45695215	45695228	6.0E-06	TGAGTAAACACAGC	14
V_NRSF_Q4_M01028	TRANSFAC	-	45694555	45694573	2.0E-06	GAGCTGTCCACAGTTCTGA	19
V_ERR3_Q2_01_M02094	TRANSFAC	-	45696592	45696604	6.0E-06	GTTCAATGTCACG	13
V_ETS_B_M00340	TRANSFAC	-	45695100	45695113	9.0E-06	GGCAGGAAGCCTCT	14
V_FREAC3_01_M00291	TRANSFAC	+	45695213	45695228	7.0E-06	TCTGAGTAAACACAGC	16
V_HNF3A_01_M01261	TRANSFAC	+	45695216	45695225	8.0E-06	GAGTAAACAC	10
V_TTF1_Q6_M00794	TRANSFAC	+	45696602	45696613	5.0E-06	AACTCAAGAGCC	12
V_REST_01_M01256	TRANSFAC	-	45694557	45694578	0.0E+00	AACGGGAGCTGTCCACAGTTCT	22
V_PAX6_Q2_M00979	TRANSFAC	+	45696593	45696606	9.0E-06	GTGACATTGAACTC	14
V_CTCF_02_M01259	TRANSFAC	-	45696512	45696531	1.0E-06	TTCTGGCCAACAGAGGGCAG	20
V_CTCF_01_M01200	TRANSFAC	-	45696510	45696529	0.0E+00	CTGGCCAACAGAGGGCAGCC	20
V_GCNF_01_M00526	TRANSFAC	-	45696592	45696609	1.0E-06	CTTGAGTTCAATGTCACG	18
V_MYF6_04_M02885	TRANSFAC	-	45696426	45696440	1.0E-06	AGCACCAGCCGCACC	15
V_PADS_C_M00211	TRANSFAC	-	45695375	45695383	4.0E-06	TGTGGTCTC	9
V_NRSF_01_M00256	TRANSFAC	+	45694554	45694574	3.0E-06	TTCAGAACTGTGGACAGCTCC	21
V_FOXA2_03_M02260	TRANSFAC	-	45695213	45695224	1.0E-06	TGTTTACTCAGA	12
V_REST_02_M02256	TRANSFAC	+	45694554	45694574	0.0E+00	TTCAGAACTGTGGACAGCTCC	21
V_SRF_06_M02916	TRANSFAC	+	45695244	45695260	3.0E-06	CTATAAAGAAAAACAGA	17
V_SOX15_04_M02903	TRANSFAC	-	45694544	45694558	6.0E-06	CTGAATGACATTAGC	15

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