Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ZNF530 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 348327 zinc finger protein 530 chr19 + 58106252 - 58111752 58111252 Transcription Factor Binding Sites   Download all TFBS in the ZNF530 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFIA_NFI_full_dimeric_15_1 SELEX + 58111191 58111205 1.0E-06 TTGGCGTGGAGCCAA 15 NFIA_NFI_full_dimeric_15_1 SELEX - 58111191 58111205 1.0E-06 TTGGCTCCACGCCAA 15 HINFP1_C2H2_full_dimeric_20_1 SELEX + 58111251 58111270 4.0E-06 GCGGAACTTCCGGCGTCCTC 20 HINFP1_C2H2_full_dimeric_20_1 SELEX - 58111251 58111270 5.0E-06 GAGGACGCCGGAAGTTCCGC 20 NFIX_NFI_full_dimeric_15_2 SELEX + 58111191 58111205 5.0E-06 TTGGCGTGGAGCCAA 15 NFIX_NFI_full_dimeric_15_2 SELEX - 58111191 58111205 4.0E-06 TTGGCTCCACGCCAA 15 RFX2_RFX_DBD_dimeric_15_1 SELEX - 58111081 58111095 9.0E-06 CGTTGCTATGGAGAA 15 NFIB_NFI_full_dimeric_15_1 SELEX + 58111191 58111205 1.0E-06 TTGGCGTGGAGCCAA 15 NFIB_NFI_full_dimeric_15_1 SELEX - 58111191 58111205 2.0E-06 TTGGCTCCACGCCAA 15 TBX21_TBX_full_dimeric_19_1 SELEX + 58111335 58111353 8.0E-06 TGACAGCGAGAAGGCGCGA 19 V_MEIS1BHOXA9_02_M00421 TRANSFAC + 58111407 58111420 8.0E-06 TGACAGCTTTGCTC 14 V_NF1_Q6_01_M00806 TRANSFAC - 58111189 58111205 3.0E-06 TTGGCTCCACGCCAAGA 17 V_NF1A_Q6_M02103 TRANSFAC - 58111190 58111205 1.0E-06 TTGGCTCCACGCCAAG 16 V_NF1A_Q6_M02103 TRANSFAC + 58111191 58111206 1.0E-06 TTGGCGTGGAGCCAAT 16 V_RFX4_03_M02789 TRANSFAC + 58111083 58111097 0.0E+00 CTCCATAGCAACGGG 15 V_RFXDC2_03_M02790 TRANSFAC + 58111083 58111097 0.0E+00 CTCCATAGCAACGGG 15 V_STAF_02_M00264 TRANSFAC + 58111163 58111183 7.0E-06 ATTACCCAGAGGCCCGTGAGC 21 V_ALPHACP1_01_M00687 TRANSFAC + 58111199 58111209 7.0E-06 GAGCCAATGAG 11 V_PLAG1_01_M01778 TRANSFAC + 58111207 58111222 8.0E-06 GAGGCTCAGGGGAGGG 16 V_SOX14_04_M02901 TRANSFAC - 58110977 58110993 4.0E-06 ATTTTTGGAGGGTATTG 17 V_RFX3_04_M02788 TRANSFAC + 58111079 58111101 0.0E+00 CTTTCTCCATAGCAACGGGGTCA 23 V_CTF1_01_M01196 TRANSFAC - 58111191 58111204 1.0E-06 TGGCTCCACGCCAA 14 TLX1_NFIC_MA0119.1 JASPAR - 58111191 58111204 1.0E-06 TGGCTCCACGCCAA 14 V_NF1_Q6_M00193 TRANSFAC + 58111189 58111206 3.0E-06 TCTTGGCGTGGAGCCAAT 18

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.