Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 348303 selenoprotein V chr19 + 40000752 - 40006252 40005752 Transcription Factor Binding Sites   Download all TFBS in the promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NF-kappaB_MA0061.1 JASPAR + 40006018 40006027 6.0E-06 GGGACTTCCC 10 ZBTB49_C2H2_DBD_monomeric_17_1 SELEX + 40003893 40003909 8.0E-06 TTGCTCTTGTTCTGTCA 17 ZNF524_C2H2_full_monomeric_14_1 SELEX + 40006190 40006203 9.0E-06 CTCGGACCCTGACT 14 PLAG1_MA0163.1 JASPAR - 40005839 40005852 2.0E-06 GGGGCCCAGGGGGA 14 V_NFKB_C_M00208 TRANSFAC + 40006017 40006028 8.0E-06 CGGGACTTCCCC 12 V_NFKB_Q6_01_M00774 TRANSFAC - 40006017 40006032 1.0E-05 CAGAGGGGAAGTCCCG 16 V_NFMUE1_Q6_M00651 TRANSFAC + 40006568 40006576 6.0E-06 CGGCCATCT 9 V_P50RELAP65_Q5_01_M01224 TRANSFAC + 40006019 40006030 9.0E-06 GGACTTCCCCTC 12 V_LXRB_RXRA_Q5_M02021 TRANSFAC + 40006736 40006750 4.0E-06 GGAGGTCAGGGTTGG 15 V_MAZR_01_M00491 TRANSFAC - 40009336 40009348 7.0E-06 AGGGGAGGGGAAA 13 V_T3RBETA_Q6_01_M02119 TRANSFAC + 40006728 40006744 8.0E-06 GGGGACGTGGAGGTCAG 17 V_LEF1TCF1_Q4_M00978 TRANSFAC + 40006336 40006346 1.0E-05 CCTTTGTTGCC 11 V_NFKAPPAB_01_M00054 TRANSFAC + 40006018 40006027 7.0E-06 GGGACTTCCC 10 V_SOX4_01_M01308 TRANSFAC - 40006336 40006343 1.0E-05 AACAAAGG 8 V_UF1H3BETA_Q6_M01068 TRANSFAC + 40006745 40006758 7.0E-06 GGTTGGGGTAGGGC 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.