Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

OTOP3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 347741 otopetrin 3 chr17 + 72926896 - 72932396 72931896 Transcription Factor Binding Sites   Download all TFBS in the OTOP3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX7_HMG_full_dimeric_16_1 SELEX + 72927659 72927674 7.0E-06 ACCAGTGTTAAGTGTG 16 ZNF282_C2H2_DBD_monomeric_17_1 SELEX - 72933723 72933739 1.0E-05 CCTTCCCATTAAACTCT 17 NFE2L2_MA0150.1 JASPAR + 72927736 72927746 1.0E-06 GTGACTCAGCA 11 V_BTEB3_Q5_M01865 TRANSFAC + 72927576 72927588 9.0E-06 CAGTGGGAGGTGT 13 V_ALX4_01_M00619 TRANSFAC + 72927621 72927633 8.0E-06 TCTCAGAATAATT 13 V_DLX2_01_M01468 TRANSFAC + 72927625 72927640 1.0E-06 AGAATAATTGGAACAG 16 V_NERF_Q2_M00531 TRANSFAC + 72927641 72927658 0.0E+00 TGTCAGGAAGTAGCGGAG 18 V_LYF1_01_M00141 TRANSFAC - 72933769 72933777 9.0E-06 TTTGGGAAA 9 V_AP1_Q4_M00188 TRANSFAC + 72927735 72927745 8.0E-06 AGTGACTCAGC 11 V_TEL2_Q6_M00678 TRANSFAC - 72927644 72927653 1.0E-06 CTACTTCCTG 10 V_MAFK_Q3_M02022 TRANSFAC + 72927737 72927747 2.0E-06 TGACTCAGCAA 11 V_AP1_01_M00517 TRANSFAC + 72927734 72927746 6.0E-06 TAGTGACTCAGCA 13 V_MAF_Q6_01_M00983 TRANSFAC - 72927736 72927746 7.0E-06 TGCTGAGTCAC 11 V_MYOGNF1_01_M00056 TRANSFAC + 72927592 72927620 7.0E-06 TGCTCCTGGGAACTTGTGATCTGCCTGCT 29 V_NRF2_Q4_M00821 TRANSFAC - 72927735 72927747 1.0E-06 TTGCTGAGTCACT 13 V_NFE2_Q6_M02104 TRANSFAC + 72927735 72927750 1.0E-06 AGTGACTCAGCAAAGA 16 V_NFE2_01_M00037 TRANSFAC - 72927736 72927746 0.0E+00 TGCTGAGTCAC 11 V_NFE2L2_01_M02263 TRANSFAC + 72927736 72927746 1.0E-06 GTGACTCAGCA 11 V_TCF11MAFG_01_M00284 TRANSFAC + 72927731 72927752 0.0E+00 CCCTAGTGACTCAGCAAAGATT 22

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.