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QRFP Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 347148 pyroglutamylated RFamide peptide chr9 - 133768725 - 133774225 133769225 Transcription Factor Binding Sites   Download all TFBS in the QRFP promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 133769156 133769174 0.0E+00 TGTCCAGTAGAGGGAAGCA 19 HOXD12_homeodomain_DBD_monomeric_9_1 SELEX + 133767585 133767593 2.0E-06 CTAATAAAA 9 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 133767585 133767594 3.0E-06 CTAATAAAAA 10 SPIC_ETS_full_monomeric_14_1 SELEX + 133769188 133769201 1.0E-06 AGGAAGAGGAAGTA 14 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 133768649 133768665 1.0E-06 GAAATCAAAAGTAAGCA 17 En1_MA0027.1 JASPAR + 133767874 133767884 2.0E-06 AAGTTGTTTTC 11 RFX4_RFX_DBD_dimeric_16_1 SELEX + 133767679 133767694 0.0E+00 GGTTGCCATAGTAACA 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 133767679 133767694 0.0E+00 TGTTACTATGGCAACC 16 SRF_MA0083.1 JASPAR - 133771202 133771213 9.0E-06 GGCCATATAAAG 12 SPIB_ETS_DBD_monomeric_14_1 SELEX + 133769188 133769201 2.0E-06 AGGAAGAGGAAGTA 14 RARG_nuclearreceptor_full_dimeric_18_1 SELEX + 133770111 133770128 8.0E-06 GAGTTCAATCCCAGGTCT 18 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 133767584 133767593 5.0E-06 GCTAATAAAA 10 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 133767679 133767694 0.0E+00 GGTTGCCATAGTAACA 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 133767679 133767694 0.0E+00 TGTTACTATGGCAACC 16 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX + 133767585 133767593 7.0E-06 CTAATAAAA 9 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 133767585 133767594 1.0E-06 CTAATAAAAA 10 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 133767584 133767594 7.0E-06 GCTAATAAAAA 11 SP1_MA0079.2 JASPAR - 133767666 133767675 9.0E-06 CCCCTCCTCC 10 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 133767585 133767594 1.0E-06 CTAATAAAAA 10 RFX2_RFX_DBD_dimeric_16_1 SELEX + 133767679 133767694 0.0E+00 GGTTGCCATAGTAACA 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 133767679 133767694 0.0E+00 TGTTACTATGGCAACC 16 RFX5_RFX_DBD_dimeric_16_3 SELEX + 133767679 133767694 0.0E+00 GGTTGCCATAGTAACA 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 133767679 133767694 0.0E+00 TGTTACTATGGCAACC 16 ELF5_ETS_full_monomeric_11_1 SELEX + 133769191 133769201 6.0E-06 AAGAGGAAGTA 11 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 133767585 133767594 1.0E-06 CTAATAAAAA 10 GBX2_homeodomain_DBD_dimeric_14_1 SELEX - 133767578 133767591 9.0E-06 TTATTAGCCTTTTA 14 SPI1_ETS_full_monomeric_14_1 SELEX + 133769188 133769201 3.0E-06 AGGAAGAGGAAGTA 14 RUNX1_MA0002.2 JASPAR - 133768272 133768282 2.0E-06 TGCTGTGGTTT 11 IRF3_IRF_full_trimeric_21_1 SELEX + 133768641 133768661 7.0E-06 CAAAGTTGGAAATCAAAAGTA 21 ETV6_ETS_full_dimeric_15_1 SELEX + 133769187 133769201 0.0E+00 CAGGAAGAGGAAGTA 15 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 133767584 133767594 2.0E-06 GCTAATAAAAA 11 CDX2_homeodomain_DBD_monomeric_9_1 SELEX + 133767585 133767593 9.0E-06 CTAATAAAA 9 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 133767584 133767594 5.0E-06 GCTAATAAAAA 11 TEAD1_MA0090.1 JASPAR - 133768379 133768390 4.0E-06 TGCATTCCACTG 12 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX + 133767585 133767594 1.0E-06 CTAATAAAAA 10 V_KLF15_Q2_M01714 TRANSFAC + 133767667 133767680 4.0E-06 GAGGAGGGGAGGGG 14 V_SPI1_01_M01203 TRANSFAC + 133769188 133769204 2.0E-06 AGGAAGAGGAAGTAGAT 17 V_TCF3_01_M01594 TRANSFAC - 133768647 133768659 6.0E-06 CTTTTGATTTCCA 13 V_AML_Q6_M00769 TRANSFAC - 133768270 133768284 6.0E-06 CCTGCTGTGGTTTGC 15 V_TCFE2A_04_M02927 TRANSFAC - 133769217 133769233 4.0E-06 TGGGTCAGATGGTAAGG 17 V_COE1_Q6_M01871 TRANSFAC + 133768561 133768574 9.0E-06 CCCCAGGGGAAGAG 14 V_SPIB_02_M02041 TRANSFAC + 133769192 133769201 1.0E-06 AGAGGAAGTA 10 V_STAT_Q6_M00777 TRANSFAC - 133768779 133768791 1.0E-05 TTTGCTTCTTGGA 13 V_IRF_Q6_01_M00972 TRANSFAC + 133767930 133767940 4.0E-06 GGAAGTGAAAA 11 V_IRF2_Q6_M01882 TRANSFAC + 133767928 133767943 8.0E-06 GTGGAAGTGAAAAGCA 16 V_SP1_03_M02281 TRANSFAC - 133767666 133767675 9.0E-06 CCCCTCCTCC 10 V_SPZ1_01_M00446 TRANSFAC - 133770019 133770033 8.0E-06 ATAGGAGGGTTGGGA 15 V_CMYB_Q5_M01821 TRANSFAC - 133769407 133769417 8.0E-06 CCTAACTGGCA 11 V_PU1_Q4_M01172 TRANSFAC - 133769189 133769207 0.0E+00 CTGATCTACTTCCTCTTCC 19 V_HOXD13_01_M01404 TRANSFAC + 133767582 133767597 2.0E-06 AGGCTAATAAAAATCC 16 V_HOXD13_01_M01404 TRANSFAC - 133769375 133769390 2.0E-06 CTGCTAATAAAACAGT 16 V_REX1_01_M01695 TRANSFAC + 133768860 133768869 5.0E-06 GTAGCCATTG 10 V_BARBIE_01_M00238 TRANSFAC - 133771195 133771209 1.0E-06 ATATAAAGCAGGGAG 15 V_ETS_Q4_M00771 TRANSFAC - 133769193 133769204 5.0E-06 ATCTACTTCCTC 12 V_SPIC_01_M02042 TRANSFAC + 133769192 133769201 1.0E-06 AGAGGAAGTA 10 V_ELF4_04_M02850 TRANSFAC - 133768107 133768123 5.0E-06 TTTCAAATAAAAGTTGT 17 V_SPI1_03_M02078 TRANSFAC + 133769192 133769201 1.0E-06 AGAGGAAGTA 10 V_HOXB13_01_M01467 TRANSFAC + 133767582 133767597 0.0E+00 AGGCTAATAAAAATCC 16 V_TCFAP2C_03_M02821 TRANSFAC + 133768557 133768571 4.0E-06 AAAGCCCCAGGGGAA 15 V_RUNX1_01_M02257 TRANSFAC - 133768272 133768282 2.0E-06 TGCTGTGGTTT 11 V_PXRRXR_02_M01153 TRANSFAC + 133770110 133770117 1.0E-05 AGAGTTCA 8 V_HOXB9_01_M01426 TRANSFAC + 133767582 133767597 3.0E-06 AGGCTAATAAAAATCC 16 V_IRF3_Q3_M01279 TRANSFAC - 133767931 133767943 9.0E-06 TGCTTTTCACTTC 13 V_CDX2_01_M01449 TRANSFAC + 133767581 133767596 4.0E-06 AAGGCTAATAAAAATC 16 V_MAZ_Q6_01_M02023 TRANSFAC + 133767666 133767679 0.0E+00 GGAGGAGGGGAGGG 14 V_ELF5_01_M01197 TRANSFAC + 133769191 133769201 6.0E-06 AAGAGGAAGTA 11 V_CDX1_01_M01373 TRANSFAC + 133767581 133767596 6.0E-06 AAGGCTAATAAAAATC 16 V_SPIB_01_M01204 TRANSFAC + 133769188 133769204 4.0E-06 AGGAAGAGGAAGTAGAT 17 V_TEF_01_M01305 TRANSFAC - 133768379 133768390 4.0E-06 TGCATTCCACTG 12 V_BBX_04_M02843 TRANSFAC - 133768345 133768361 5.0E-06 TGAAAGTTAAAAATGGG 17 V_ATF3_Q6_M00513 TRANSFAC + 133768401 133768414 2.0E-06 CTCTGATGTCAGCC 14 V_CTCF_02_M01259 TRANSFAC + 133769153 133769172 1.0E-06 TTCTGTCCAGTAGAGGGAAG 20 V_CTCF_01_M01200 TRANSFAC + 133769155 133769174 1.0E-06 CTGTCCAGTAGAGGGAAGCA 20 V_MAF_Q6_01_M00983 TRANSFAC - 133770137 133770147 4.0E-06 TCCTGAGTCAA 11 V_KAISO_01_M01119 TRANSFAC - 133769384 133769393 2.0E-06 ATCCTGCTAA 10 V_IRF7_01_M00453 TRANSFAC + 133768646 133768663 1.0E-06 TTGGAAATCAAAAGTAAG 18 V_ELF1_Q6_M00746 TRANSFAC + 133769189 133769200 1.0E-06 GGAAGAGGAAGT 12 V_HBP1_04_M02866 TRANSFAC + 133768341 133768357 0.0E+00 TTTTCCCATTTTTAACT 17 V_SP4_04_M02914 TRANSFAC + 133770145 133770159 8.0E-06 GGAAGGCGTGCCCTA 15 V_AP1FJ_Q2_M00172 TRANSFAC - 133767503 133767513 9.0E-06 AGTGACTTATA 11 V_EBNA1_01_M01745 TRANSFAC - 133768783 133768798 7.0E-06 GGAAGGATTTGCTTCT 16 V_BDP1_01_M01796 TRANSFAC - 133770111 133770122 5.0E-06 GGGATTGAACTC 12 V_TCFAP2B_03_M02820 TRANSFAC + 133768558 133768571 9.0E-06 AAGCCCCAGGGGAA 14 V_SPIC_02_M02077 TRANSFAC + 133769192 133769201 1.0E-06 AGAGGAAGTA 10 V_STAT1STAT1_Q3_M01212 TRANSFAC - 133768112 133768124 4.0E-06 TTTTCAAATAAAA 13 V_TCFAP2A_03_M02819 TRANSFAC + 133768557 133768571 4.0E-06 AAAGCCCCAGGGGAA 15 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 133768272 133768279 1.0E-05 TGTGGTTT 8 V_TCFAP2E_03_M02822 TRANSFAC + 133768557 133768571 1.0E-05 AAAGCCCCAGGGGAA 15 V_HOXD10_01_M01375 TRANSFAC + 133767582 133767598 4.0E-06 AGGCTAATAAAAATCCA 17 V_TCF3_05_M02920 TRANSFAC + 133767582 133767596 0.0E+00 AGGCTAATAAAAATC 15 V_AR_Q6_M00962 TRANSFAC - 133768305 133768313 6.0E-06 TGAGCACAA 9 V_PAX4_04_M00380 TRANSFAC - 133768315 133768344 6.0E-06 AAAAAAGAACCCGATCCCCTTCTCCATGCC 30 V_RFX1_02_M00281 TRANSFAC + 133767678 133767695 0.0E+00 GGGTTGCCATAGTAACAT 18 V_RFX1_02_M00281 TRANSFAC - 133767678 133767695 1.0E-06 ATGTTACTATGGCAACCC 18 V_SPI1_02_M02043 TRANSFAC + 133769192 133769201 1.0E-06 AGAGGAAGTA 10 V_SPIB_03_M02076 TRANSFAC + 133769192 133769201 1.0E-06 AGAGGAAGTA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.