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IFNB1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 3456 interferon, beta 1, fibroblast chr9 - 21077443 - 21082943 21077943 Transcription Factor Binding Sites   Download all TFBS in the IFNB1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints IRF7_IRF_DBD_dimeric_14_1 SELEX + 21082269 21082282 5.0E-06 TAGAAAGTAAAACT 14 SOX21_HMG_DBD_dimeric_13_2 SELEX - 21082283 21082295 6.0E-06 GAAATGTCATTCA 13 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX - 21082262 21082272 2.0E-06 TCTAAATGTCA 11 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 21082873 21082884 9.0E-06 ACTATAAAAAGA 12 En1_MA0027.1 JASPAR - 21082201 21082211 0.0E+00 AAGTAGTTTTC 11 SRY_HMG_DBD_dimeric_13_2 SELEX + 21082283 21082295 2.0E-06 TGAATGACATTTC 13 SRY_HMG_DBD_dimeric_13_2 SELEX + 21082847 21082859 3.0E-06 TGAATGCCTTTTA 13 ELF4_ETS_full_monomeric_12_1 SELEX - 21078945 21078956 2.0E-06 AACCAGGAAGTG 12 TBP_MA0108.2 JASPAR - 21082869 21082883 0.0E+00 CTATAAAAAGAAATG 15 EWSR1-FLI1_MA0149.1 JASPAR - 21082106 21082123 8.0E-06 GGAAAGATGACAGGAAAG 18 SOX7_HMG_full_dimeric_17_2 SELEX - 21082281 21082297 3.0E-06 TAGAAATGTCATTCAAG 17 SOX15_HMG_full_dimeric_15_3 SELEX + 21082282 21082296 3.0E-06 TTGAATGACATTTCT 15 FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 21082764 21082777 6.0E-06 TGATAATGTTTAGT 14 Pax4_MA0068.1 JASPAR - 21082314 21082343 2.0E-06 GAAATTTATAGAAAAGCATTTCCACATTAA 30 OTX2_homeodomain_DBD_dimeric_15_1 SELEX + 21073291 21073305 0.0E+00 TTTAATCCTCTTAAG 15 IRF1_MA0050.1 JASPAR + 21082271 21082282 3.0E-06 GAAAGTAAAACT 12 RUNX2_RUNX_DBD_monomeric_9_1 SELEX - 21082232 21082240 1.0E-05 TAACCACAA 9 FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 21082764 21082777 2.0E-06 TGATAATGTTTAGT 14 RUNX2_RUNX_DBD_dimeric_18_1 SELEX - 21082232 21082249 0.0E+00 AAACCTCATTAACCACAA 18 Foxq1_MA0040.1 JASPAR - 21082764 21082774 2.0E-06 TAATGTTTAGT 11 ELF3_ETS_full_monomeric_13_1 SELEX - 21078944 21078956 2.0E-06 AACCAGGAAGTGG 13 SOX2_HMG_full_dimeric_15_1 SELEX + 21082282 21082296 6.0E-06 TTGAATGACATTTCT 15 SOX2_HMG_full_dimeric_15_1 SELEX - 21082282 21082296 9.0E-06 AGAAATGTCATTCAA 15 OTX2_homeodomain_DBD_monomeric_8_1 SELEX + 21073292 21073299 7.0E-06 TTAATCCT 8 FOXI1_MA0042.1 JASPAR - 21082763 21082774 7.0E-06 TAATGTTTAGTT 12 Otx1_homeodomain_DBD_dimeric_15_1 SELEX + 21073291 21073305 0.0E+00 TTTAATCCTCTTAAG 15 SOX14_HMG_DBD_dimeric_15_1 SELEX + 21082282 21082296 4.0E-06 TTGAATGACATTTCT 15 PITX1_homeodomain_full_monomeric_9_1 SELEX + 21073291 21073299 2.0E-06 TTTAATCCT 9 EHF_ETS_full_monomeric_12_1 SELEX - 21078945 21078956 2.0E-06 AACCAGGAAGTG 12 ELF5_ETS_full_monomeric_11_1 SELEX - 21078945 21078955 4.0E-06 ACCAGGAAGTG 11 SOX18_HMG_full_dimeric_15_3 SELEX - 21082282 21082296 3.0E-06 AGAAATGTCATTCAA 15 ELF3_ETS_DBD_monomeric_12_1 SELEX - 21078945 21078956 1.0E-06 AACCAGGAAGTG 12 Sox3_HMG_DBD_dimeric_17_3 SELEX - 21082281 21082297 5.0E-06 TAGAAATGTCATTCAAG 17 Sox1_HMG_DBD_dimeric_15_2 SELEX - 21082282 21082296 9.0E-06 AGAAATGTCATTCAA 15 RUNX3_RUNX_DBD_dimeric_18_1 SELEX - 21082232 21082249 0.0E+00 AAACCTCATTAACCACAA 18 V_HOXA9_01_M01351 TRANSFAC - 21082871 21082887 7.0E-06 AGAACTATAAAAAGAAA 17 V_FOXP1_01_M00987 TRANSFAC - 21082762 21082781 4.0E-06 GTGTTGATAATGTTTAGTTT 20 V_CEBPG_Q6_M00622 TRANSFAC + 21078884 21078896 7.0E-06 ACCATTTCACAAA 13 V_OBOX6_01_M01445 TRANSFAC - 21073290 21073304 3.0E-06 TTAAGAGGATTAAAA 15 V_TCF3_01_M01594 TRANSFAC + 21082123 21082135 2.0E-06 CCTTTGTTATTTG 13 V_OBOX5_05_M03066 TRANSFAC - 21073287 21073303 4.0E-06 TAAGAGGATTAAAAGAC 17 V_OBOX1_01_M01450 TRANSFAC - 21073288 21073304 1.0E-06 TTAAGAGGATTAAAAGA 17 V_MTF1_Q4_M00650 TRANSFAC + 21082156 21082169 9.0E-06 TTTGCACACATCCT 14 V_EVI1_04_M00081 TRANSFAC - 21082871 21082885 4.0E-06 AACTATAAAAAGAAA 15 V_BCL6_01_M01183 TRANSFAC - 21082272 21082287 2.0E-06 ATTCAAGTTTTACTTT 16 V_BCL6_01_M01183 TRANSFAC + 21082862 21082877 8.0E-06 CAACAAGCATTTCTTT 16 V_AML3_Q6_M01856 TRANSFAC - 21082232 21082239 1.0E-05 AACCACAA 8 V_ETS_B_M00340 TRANSFAC - 21078942 21078955 8.0E-06 ACCAGGAAGTGGTT 14 V_HOXA13_02_M01297 TRANSFAC + 21082273 21082281 8.0E-06 AAGTAAAAC 9 V_MAFB_03_M02879 TRANSFAC + 21073254 21073268 7.0E-06 GACTTGCAAATATAT 15 V_MAFB_03_M02879 TRANSFAC - 21082151 21082165 4.0E-06 TGTGTGCAAAAATAA 15 V_FOXJ2_02_M00423 TRANSFAC - 21078992 21079005 0.0E+00 ATCTTAATACTTTT 14 V_NFAT3_Q3_M01734 TRANSFAC - 21078958 21078967 4.0E-06 TATTTTTCCT 10 V_NERF_Q2_M00531 TRANSFAC - 21078939 21078956 5.0E-06 AACCAGGAAGTGGTTCAG 18 V_NERF_Q2_M00531 TRANSFAC - 21082201 21082218 9.0E-06 GGACTGGAAGTAGTTTTC 18 V_NKX24_01_M01350 TRANSFAC - 21081564 21081579 8.0E-06 AAGACCTCTTGAATTA 16 V_LDSPOLYA_B_M00317 TRANSFAC + 21073282 21073297 9.0E-06 GACCTGTCTTTTAATC 16 V_ETS_Q4_M00771 TRANSFAC + 21078942 21078953 0.0E+00 AACCACTTCCTG 12 V_OBOX5_02_M01480 TRANSFAC - 21073287 21073303 4.0E-06 TAAGAGGATTAAAAGAC 17 V_HELIOSA_02_M01004 TRANSFAC + 21078955 21078965 7.0E-06 TTCAGGAAAAA 11 V_FOXA2_02_M02853 TRANSFAC - 21082122 21082136 0.0E+00 ACAAATAACAAAGGG 15 V_ZFP105_03_M02827 TRANSFAC - 21082123 21082137 2.0E-06 GACAAATAACAAAGG 15 V_TATA_01_M00252 TRANSFAC - 21082869 21082883 0.0E+00 CTATAAAAAGAAATG 15 V_AML2_01_M01759 TRANSFAC - 21082232 21082239 1.0E-05 AACCACAA 8 V_HOXA3_07_M02869 TRANSFAC + 21078991 21079004 9.0E-06 GAAAAGTATTAAGA 14 V_MAZ_Q6_01_M02023 TRANSFAC - 21082166 21082179 3.0E-06 AGGGGAGGAAAGGA 14 V_HNF1_Q6_01_M01011 TRANSFAC + 21078987 21079007 3.0E-06 AACAGAAAAGTATTAAGATGG 21 V_OBOX2_01_M01364 TRANSFAC - 21073288 21073304 4.0E-06 TTAAGAGGATTAAAAGA 17 V_MEF2_03_M00232 TRANSFAC + 21082326 21082347 8.0E-06 TGCTTTTCTATAAATTTCAGAG 22 V_MEF2_03_M00232 TRANSFAC + 21082867 21082888 1.0E-05 AGCATTTCTTTTTATAGTTCTG 22 V_TATA_C_M00216 TRANSFAC - 21082875 21082884 2.0E-06 ACTATAAAAA 10 V_SOX12_04_M02900 TRANSFAC - 21082870 21082885 7.0E-06 AACTATAAAAAGAAAT 16 V_PEBP_Q6_M00984 TRANSFAC - 21082228 21082242 9.0E-06 ATTAACCACAAGGAA 15 V_TEL2_Q6_M00678 TRANSFAC + 21078944 21078953 6.0E-06 CCACTTCCTG 10 V_OCAB_Q6_M02113 TRANSFAC - 21073254 21073264 6.0E-06 ATTTGCAAGTC 11 V_HFH1_01_M00129 TRANSFAC - 21082763 21082774 0.0E+00 TAATGTTTAGTT 12 V_SRF_Q5_02_M01007 TRANSFAC + 21082869 21082887 5.0E-06 CATTTCTTTTTATAGTTCT 19 V_CTCF_02_M01259 TRANSFAC + 21078896 21078915 6.0E-06 AAGCTAACAGAAGAGGGAGC 20 V_OCT4_02_M01124 TRANSFAC - 21082770 21082784 7.0E-06 GTTGTGTTGATAATG 15 V_SOX11_03_M02795 TRANSFAC - 21082119 21082135 1.0E-06 CAAATAACAAAGGGAAA 17 V_OTX2_Q3_M01719 TRANSFAC - 21073290 21073302 4.0E-06 AAGAGGATTAAAA 13 V_POU6F1_02_M01462 TRANSFAC + 21082234 21082250 2.0E-06 GTGGTTAATGAGGTTTG 17 V_OBOX2_02_M03064 TRANSFAC - 21073288 21073304 4.0E-06 TTAAGAGGATTAAAAGA 17 V_FOXL1_02_M02857 TRANSFAC + 21078977 21078992 8.0E-06 AAGACCAAACAACAGA 16 V_FOXL1_02_M02857 TRANSFAC + 21082772 21082787 9.0E-06 TTATCAACACAACAGA 16 V_CBF_01_M01079 TRANSFAC + 21082228 21082243 9.0E-06 TTCCTTGTGGTTAATG 16 V_HDX_01_M01333 TRANSFAC + 21082300 21082316 1.0E-06 CATTTGAAATCACTTTA 17 V_PITX1_01_M01484 TRANSFAC - 21073288 21073304 0.0E+00 TTAAGAGGATTAAAAGA 17 V_PARP_Q3_M01211 TRANSFAC + 21078925 21078934 8.0E-06 TTAGAAAAAC 10 V_PARP_Q3_M01211 TRANSFAC - 21082050 21082059 1.0E-06 TAAGAAATAG 10 V_OTX2_01_M01387 TRANSFAC - 21073287 21073303 5.0E-06 TAAGAGGATTAAAAGAC 17 V_TBX15_02_M01264 TRANSFAC + 21082882 21082899 9.0E-06 AGTTCTGGAGGTTGGAAA 18 V_PLZF_02_M01075 TRANSFAC - 21081954 21081982 4.0E-06 GAGAAATGAAGCTAAAACTTAAAATGATG 29 V_PLZF_02_M01075 TRANSFAC - 21082758 21082786 4.0E-06 CTGTTGTGTTGATAATGTTTAGTTTGTGG 29 V_ETS1_B_M00339 TRANSFAC - 21078940 21078954 1.0E-06 CCAGGAAGTGGTTCA 15 V_ETS1_B_M00339 TRANSFAC - 21082100 21082114 9.0E-06 ACAGGAAAGGGTTCG 15 V_LEF1TCF1_Q4_M00978 TRANSFAC + 21082123 21082133 7.0E-06 CCTTTGTTATT 11 V_HSF2_02_M01244 TRANSFAC - 21082331 21082343 4.0E-06 GAAATTTATAGAA 13 V_POU6F1_03_M01479 TRANSFAC + 21082234 21082250 1.0E-06 GTGGTTAATGAGGTTTG 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 21082106 21082123 8.0E-06 GGAAAGATGACAGGAAAG 18 V_SOX18_04_M02905 TRANSFAC + 21081559 21081574 2.0E-06 GGACTTAATTCAAGAG 16 V_SOX4_01_M01308 TRANSFAC - 21082123 21082130 1.0E-05 AACAAAGG 8 V_HOMEZ_01_M01429 TRANSFAC + 21081950 21081966 7.0E-06 AATACATCATTTTAAGT 17 V_SOX2_Q6_M01272 TRANSFAC + 21082119 21082134 1.0E-06 TTTCCCTTTGTTATTT 16 V_DR3_Q4_M00966 TRANSFAC + 21078929 21078949 5.0E-06 AAAAACCGCCCTGAACCACTT 21 V_PITX2_01_M01447 TRANSFAC - 21073287 21073303 3.0E-06 TAAGAGGATTAAAAGAC 17 V_SOX15_04_M02903 TRANSFAC + 21082282 21082296 9.0E-06 TTGAATGACATTTCT 15 V_SOX15_04_M02903 TRANSFAC - 21082282 21082296 5.0E-06 AGAAATGTCATTCAA 15 V_MEF2_01_M00006 TRANSFAC - 21082258 21082273 9.0E-06 TTCTAAATGTCACTCT 16 V_OBOX5_01_M01381 TRANSFAC - 21073287 21073303 6.0E-06 TAAGAGGATTAAAAGAC 17 V_OBOX6_02_M03068 TRANSFAC - 21073290 21073304 3.0E-06 TTAAGAGGATTAAAA 15 V_OBOX3_02_M03065 TRANSFAC - 21073288 21073304 7.0E-06 TTAAGAGGATTAAAAGA 17 V_OTX1_01_M01366 TRANSFAC - 21073287 21073303 5.0E-06 TAAGAGGATTAAAAGAC 17 V_MTF1_05_M02778 TRANSFAC - 21082154 21082169 1.0E-05 AGGATGTGTGCAAAAA 16 V_BRCA_01_M01082 TRANSFAC - 21078986 21078993 1.0E-05 TTCTGTTG 8 V_BRCA_01_M01082 TRANSFAC - 21082781 21082788 1.0E-05 TTCTGTTG 8 V_OBOX6_06_M03067 TRANSFAC + 21073287 21073303 6.0E-06 GTCTTTTAATCCTCTTA 17 V_OBOX3_01_M01466 TRANSFAC - 21073288 21073304 7.0E-06 TTAAGAGGATTAAAAGA 17 V_SMAD1_01_M01590 TRANSFAC - 21082122 21082133 1.0E-06 AATAACAAAGGG 12 V_NANOG_02_M01247 TRANSFAC - 21082118 21082137 3.0E-06 GACAAATAACAAAGGGAAAG 20 V_OTX3_01_M01403 TRANSFAC - 21073288 21073304 4.0E-06 TTAAGAGGATTAAAAGA 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.