Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

MSANTD1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
345222 Myb/SANT-like DNA-binding domain containing 1 chr4 +3245766 - 3251266 3250766

Transcription Factor Binding Sites

 
Download all TFBS in the MSANTD1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 3253042 3253059 9.0E-06 AGCATAAATAATGAATAA 18
POU4F2_POU_full_monomeric_16_1 SELEX - 3253041 3253056 7.0E-06 ATAAATAATGAATAAC 16
POU4F2_POU_full_monomeric_16_1 SELEX - 3253045 3253060 1.0E-06 CAGCATAAATAATGAA 16
POU3F3_POU_DBD_monomeric_12_1 SELEX + 3253044 3253055 7.0E-06 ATTCATTATTTA 12
FOXF2_MA0030.1 JASPAR - 3253048 3253061 8.0E-06 TCAGCATAAATAAT 14
FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 3253040 3253056 6.0E-06 ATAAATAATGAATAACC 17
POU3F2_POU_DBD_monomeric_13_1 SELEX + 3253043 3253055 5.0E-06 TATTCATTATTTA 13
POU3F2_POU_DBD_monomeric_13_1 SELEX - 3253049 3253061 3.0E-06 TCAGCATAAATAA 13
RFX4_RFX_DBD_dimeric_16_1 SELEX + 3250815 3250830 0.0E+00 TGTTGCTATGGAAACG 16
RFX4_RFX_DBD_dimeric_16_1 SELEX - 3250815 3250830 0.0E+00 CGTTTCCATAGCAACA 16
EBF1_EBF_full_dimeric_14_1 SELEX - 3253074 3253087 8.0E-06 CCTCCCCTGGGACT 14
POU3F4_POU_DBD_monomeric_11_1 SELEX - 3253049 3253059 7.0E-06 AGCATAAATAA 11
BARHL2_homeodomain_full_dimeric_16_1 SELEX - 3250852 3250867 1.0E-06 TAAAAGCTTTTAAACG 16
POU4F3_POU_DBD_monomeric_16_1 SELEX - 3253041 3253056 1.0E-06 ATAAATAATGAATAAC 16
POU4F3_POU_DBD_monomeric_16_1 SELEX + 3253044 3253059 0.0E+00 ATTCATTATTTATGCT 16
POU4F3_POU_DBD_monomeric_16_1 SELEX - 3253045 3253060 2.0E-06 CAGCATAAATAATGAA 16
Barhl1_homeodomain_DBD_dimeric_16_1 SELEX - 3250852 3250867 0.0E+00 TAAAAGCTTTTAAACG 16
RFX2_RFX_DBD_dimeric_15_1 SELEX + 3250815 3250829 2.0E-06 TGTTGCTATGGAAAC 15
Rfx3_RFX_DBD_dimeric_16_1 SELEX + 3250815 3250830 0.0E+00 TGTTGCTATGGAAACG 16
Rfx3_RFX_DBD_dimeric_16_1 SELEX - 3250815 3250830 0.0E+00 CGTTTCCATAGCAACA 16
FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 3253043 3253056 3.0E-06 ATAAATAATGAATA 14
HNF1A_homeodomain_full_dimeric_15_1 SELEX - 3253040 3253054 4.0E-06 AAATAATGAATAACC 15
RFX3_RFX_DBD_dimeric_15_1 SELEX + 3250815 3250829 4.0E-06 TGTTGCTATGGAAAC 15
RFX2_RFX_DBD_dimeric_16_1 SELEX + 3250815 3250830 0.0E+00 TGTTGCTATGGAAACG 16
RFX2_RFX_DBD_dimeric_16_1 SELEX - 3250815 3250830 0.0E+00 CGTTTCCATAGCAACA 16
POU1F1_POU_DBD_monomeric_17_1 SELEX + 3253041 3253057 4.0E-06 GTTATTCATTATTTATG 17
POU1F1_POU_DBD_monomeric_17_1 SELEX - 3253043 3253059 4.0E-06 AGCATAAATAATGAATA 17
RFX5_RFX_DBD_dimeric_16_3 SELEX + 3250815 3250830 0.0E+00 TGTTGCTATGGAAACG 16
RFX5_RFX_DBD_dimeric_16_3 SELEX - 3250815 3250830 0.0E+00 CGTTTCCATAGCAACA 16
POU3F1_POU_DBD_monomeric_12_2 SELEX + 3253044 3253055 6.0E-06 ATTCATTATTTA 12
POU3F1_POU_DBD_monomeric_12_2 SELEX - 3253045 3253056 4.0E-06 ATAAATAATGAA 12
RORA_nuclearreceptor_DBD_dimeric_20_1 SELEX - 3250831 3250850 5.0E-06 GAAACGTCATTTTGATGTCA 20
IRF3_IRF_full_trimeric_21_1 SELEX - 3253086 3253106 2.0E-06 CAGGAATGGAGACAGAAACCC 21
HNF1B_homeodomain_full_dimeric_15_1 SELEX - 3253040 3253054 4.0E-06 AAATAATGAATAACC 15
POU3F3_POU_DBD_dimeric_12_1 SELEX - 3253045 3253056 4.0E-06 ATAAATAATGAA 12
POU4F1_POU_DBD_monomeric_14_1 SELEX - 3253043 3253056 1.0E-06 ATAAATAATGAATA 14
POU4F1_POU_DBD_monomeric_14_1 SELEX + 3253044 3253057 0.0E+00 ATTCATTATTTATG 14
POU4F1_POU_DBD_monomeric_14_1 SELEX - 3253047 3253060 7.0E-06 CAGCATAAATAATG 14
HNF1A_MA0046.1 JASPAR + 3253040 3253053 5.0E-06 GGTTATTCATTATT 14
FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 3253043 3253056 3.0E-06 ATAAATAATGAATA 14
V_HNF3B_01_M00131 TRANSFAC + 3253045 3253059 7.0E-06 TTCATTATTTATGCT 15
V_TST1_02_M01316 TRANSFAC - 3253042 3253058 2.0E-06 GCATAAATAATGAATAA 17
V_DBX1_01_M01483 TRANSFAC + 3253042 3253058 6.0E-06 TTATTCATTATTTATGC 17
V_FREAC7_01_M00293 TRANSFAC - 3253046 3253061 4.0E-06 TCAGCATAAATAATGA 16
V_EBF_Q6_M00977 TRANSFAC - 3253076 3253086 1.0E-05 CTCCCCTGGGA 11
V_NRSF_Q4_M01028 TRANSFAC + 3249802 3249820 1.0E-06 GCACAGTCCATGCTGCACA 19
V_HOXA4_01_M01370 TRANSFAC + 3253040 3253056 6.0E-06 GGTTATTCATTATTTAT 17
V_RFX4_03_M02789 TRANSFAC - 3250813 3250827 0.0E+00 TTCCATAGCAACAGA 15
V_NKX61_03_M01489 TRANSFAC - 3253041 3253057 9.0E-06 CATAAATAATGAATAAC 17
V_BRN2_01_M00145 TRANSFAC - 3253044 3253059 7.0E-06 AGCATAAATAATGAAT 16
V_HMBOX1_01_M01456 TRANSFAC - 3250861 3250877 8.0E-06 GGAATTTAGTTAAAAGC 17
V_MTERF_01_M01245 TRANSFAC + 3253017 3253030 5.0E-06 TGGCTCTGGTTGGT 14
V_DBX2_01_M01360 TRANSFAC - 3253042 3253057 1.0E-06 CATAAATAATGAATAA 16
V_HNF1_Q6_M00790 TRANSFAC + 3253039 3253056 1.0E-06 AGGTTATTCATTATTTAT 18
V_PAX2_01_M00098 TRANSFAC + 3253037 3253055 8.0E-06 CCAGGTTATTCATTATTTA 19
V_HNF1_Q6_01_M01011 TRANSFAC - 3253037 3253057 3.0E-06 CATAAATAATGAATAACCTGG 21
V_RFXDC2_03_M02790 TRANSFAC - 3250813 3250827 1.0E-06 TTCCATAGCAACAGA 15
V_PIT1_01_M01465 TRANSFAC - 3253042 3253058 8.0E-06 GCATAAATAATGAATAA 17
V_PIT1_01_M01465 TRANSFAC + 3253043 3253059 9.0E-06 TATTCATTATTTATGCT 17
V_NCX_02_M01420 TRANSFAC - 3253039 3253055 4.0E-06 TAAATAATGAATAACCT 17
V_POU6F1_01_M00465 TRANSFAC - 3253048 3253058 0.0E+00 GCATAAATAAT 11
V_NKX63_01_M01470 TRANSFAC - 3253041 3253057 6.0E-06 CATAAATAATGAATAAC 17
V_MAF_Q6_01_M00983 TRANSFAC - 3252982 3252992 4.0E-06 TCCTGAGTCAG 11
V_BRN4_01_M01473 TRANSFAC - 3253042 3253058 8.0E-06 GCATAAATAATGAATAA 17
V_HNF1_01_M00132 TRANSFAC + 3253040 3253054 6.0E-06 GGTTATTCATTATTT 15
V_LMX1B_01_M01363 TRANSFAC + 3250860 3250876 8.0E-06 AGCTTTTAACTAAATTC 17
V_HNF1B_01_M01425 TRANSFAC + 3250860 3250876 5.0E-06 AGCTTTTAACTAAATTC 17
V_BARX2_01_M01431 TRANSFAC + 3253042 3253057 7.0E-06 TTATTCATTATTTATG 16
V_SMAD_Q6_01_M00974 TRANSFAC - 3253029 3253039 7.0E-06 TGGCCAGACAC 11
V_FOXJ2_01_M00422 TRANSFAC - 3253045 3253062 1.0E-05 TTCAGCATAAATAATGAA 18
V_HNF1A_Q5_M02013 TRANSFAC + 3253040 3253050 7.0E-06 GGTTATTCATT 11
V_SOX1_03_M02802 TRANSFAC + 3253039 3253054 4.0E-06 AGGTTATTCATTATTT 16
V_RFX3_04_M02788 TRANSFAC - 3250809 3250831 1.0E-06 ACGTTTCCATAGCAACAGAGCAA 23
V_HNF1A_01_M02162 TRANSFAC + 3253040 3253053 5.0E-06 GGTTATTCATTATT 14
V_BRCA_01_M01082 TRANSFAC + 3250786 3250793 1.0E-05 TTCTGTTG 8
V_RFX1_02_M00281 TRANSFAC + 3250814 3250831 1.0E-06 CTGTTGCTATGGAAACGT 18
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL