Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

C16orf96 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 342346 chromosome 16 open reading frame 96 chr16 + 4601490 - 4606990 4606490 Transcription Factor Binding Sites   Download all TFBS in the C16orf96 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU3F3_POU_DBD_monomeric_12_1 SELEX - 4602854 4602865 1.0E-06 TAGAATAATTTA 12 POU3F2_POU_DBD_monomeric_13_1 SELEX - 4602854 4602866 1.0E-06 TTAGAATAATTTA 13 POU3F4_POU_DBD_monomeric_11_1 SELEX - 4602854 4602864 4.0E-06 AGAATAATTTA 11 TBX19_TBX_DBD_dimeric_20_1 SELEX + 4602838 4602857 0.0E+00 CTTCACATTTAAATGCTAAA 20 TBX19_TBX_DBD_dimeric_20_1 SELEX - 4602838 4602857 0.0E+00 TTTAGCATTTAAATGTGAAG 20 Pax4_MA0068.1 JASPAR - 4602697 4602726 9.0E-06 GAAAAATTGCACACACTGTGACCCAGCCAG 30 BARHL2_homeodomain_full_dimeric_16_1 SELEX + 4602854 4602869 5.0E-06 TAAATTATTCTAAAAG 16 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 4602854 4602869 6.0E-06 TAAATTATTCTAAAAG 16 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX + 4602840 4602855 1.0E-06 TCACATTTAAATGCTA 16 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 4602840 4602855 1.0E-06 TAGCATTTAAATGTGA 16 ZSCAN4_C2H2_full_monomeric_15_1 SELEX - 4602705 4602719 8.0E-06 TGCACACACTGTGAC 15 EN1_homeodomain_full_dimeric_14_1 SELEX + 4602847 4602860 8.0E-06 TAAATGCTAAATTA 14 T_TBX_full_dimeric_16_1 SELEX + 4602840 4602855 7.0E-06 TCACATTTAAATGCTA 16 T_TBX_full_dimeric_16_1 SELEX - 4602840 4602855 5.0E-06 TAGCATTTAAATGTGA 16 POU3F1_POU_DBD_monomeric_12_2 SELEX - 4602854 4602865 1.0E-06 TAGAATAATTTA 12 Pou5f1_MA0142.1 JASPAR + 4602843 4602857 4.0E-06 CATTTAAATGCTAAA 15 GBX2_homeodomain_DBD_dimeric_14_1 SELEX + 4602847 4602860 8.0E-06 TAAATGCTAAATTA 14 TP53_MA0106.1 JASPAR + 4602638 4602657 9.0E-06 ACAAACATCCTTGTGCATGG 20 V_HMGIY_Q3_M01010 TRANSFAC + 4602714 4602728 1.0E-05 TGTGCAATTTTTCAG 15 V_EVI1_04_M00081 TRANSFAC + 4602870 4602884 1.0E-05 AAACATGAATGGTTA 15 V_BCL6_01_M01183 TRANSFAC - 4602855 4602870 5.0E-06 TCTTTTAGAATAATTT 16 V_POU5F1_02_M02245 TRANSFAC + 4602843 4602857 4.0E-06 CATTTAAATGCTAAA 15 V_IK_Q5_M01169 TRANSFAC - 4603729 4603738 3.0E-06 TTTGGGAGGC 10 V_SOX11_04_M02899 TRANSFAC + 4602854 4602867 6.0E-06 TAAATTATTCTAAA 14 V_AFP1_Q6_M00616 TRANSFAC - 4602715 4602725 5.0E-06 AAAAATTGCAC 11 V_PU1_Q4_M01172 TRANSFAC - 4608140 4608158 9.0E-06 AGCGTCAGTTTCCTCTTCT 19 V_LYF1_01_M00141 TRANSFAC - 4603730 4603738 9.0E-06 TTTGGGAGG 9 V_SOX21_03_M02803 TRANSFAC - 4602853 4602868 7.0E-06 TTTTAGAATAATTTAG 16 V_SOX13_03_M02797 TRANSFAC - 4602852 4602867 5.0E-06 TTTAGAATAATTTAGC 16 V_SOX18_03_M02801 TRANSFAC + 4602853 4602868 1.0E-06 CTAAATTATTCTAAAA 16 V_JUNDM2_04_M02876 TRANSFAC - 4606367 4606382 3.0E-06 GGTGGTGAGTCACAGC 16 V_OCT1_04_M00138 TRANSFAC - 4602837 4602859 1.0E-05 AATTTAGCATTTAAATGTGAAGT 23 V_OCT1_04_M00138 TRANSFAC + 4602842 4602864 0.0E+00 ACATTTAAATGCTAAATTATTCT 23 V_OCT1_04_M00138 TRANSFAC + 4602852 4602874 3.0E-06 GCTAAATTATTCTAAAAGAAACA 23 V_MAFK_Q3_M02022 TRANSFAC + 4606371 4606381 8.0E-06 TGACTCACCAC 11 V_POU6F1_01_M00465 TRANSFAC - 4602853 4602863 7.0E-06 GAATAATTTAG 11 V_ELF1_Q6_M00746 TRANSFAC + 4608140 4608151 5.0E-06 AGAAGAGGAAAC 12 V_OCT1_06_M00162 TRANSFAC + 4602841 4602854 4.0E-06 CACATTTAAATGCT 14 V_OCT1_07_M00248 TRANSFAC + 4602658 4602669 1.0E-05 TGTATGTCAATT 12 V_SOX8_03_M02808 TRANSFAC + 4602851 4602867 6.0E-06 TGCTAAATTATTCTAAA 17 V_SOX14_04_M02901 TRANSFAC + 4602597 4602613 0.0E+00 TAGTTGGATGGGAATTT 17 V_PAX4_02_M00377 TRANSFAC - 4602853 4602863 6.0E-06 GAATAATTTAG 11 V_SOX12_03_M02796 TRANSFAC + 4602855 4602868 8.0E-06 AAATTATTCTAAAA 14 V_PIT1_Q6_M00802 TRANSFAC + 4602849 4602866 3.0E-06 AATGCTAAATTATTCTAA 18 V_HMEF2_Q6_M00406 TRANSFAC - 4602604 4602619 4.0E-06 AGCTAAAAATTCCCAT 16 V_GLIS2_04_M02863 TRANSFAC + 4602857 4602870 5.0E-06 ATTATTCTAAAAGA 14 V_OCT4_01_M01125 TRANSFAC + 4602843 4602857 2.0E-06 CATTTAAATGCTAAA 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.