Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

VWA2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 340706 von Willebrand factor A domain containing 2 chr10 + 115994012 - 115999512 115999012 Transcription Factor Binding Sites   Download all TFBS in the VWA2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX + 115994197 115994212 3.0E-06 ATGAATACTTAGTTAA 16 TBX20_TBX_full_monomeric_11_1 SELEX - 115994043 115994053 3.0E-06 AAGGTGTTAAA 11 TBX1_TBX_DBD_dimeric_20_2 SELEX + 115994044 115994063 1.0E-06 TTAACACCTTGTGGTGTTAA 20 TBX1_TBX_DBD_dimeric_20_2 SELEX - 115994044 115994063 0.0E+00 TTAACACCACAAGGTGTTAA 20 Creb3l2_bZIP_DBD_dimeric_12_1 SELEX + 115999203 115999214 3.0E-06 TCCCACGTGGCA 12 TBR1_TBX_DBD_monomeric_10_1 SELEX - 115994043 115994052 2.0E-06 AGGTGTTAAA 10 TBX5_TBX_DBD_dimeric_20_1 SELEX + 115994033 115994052 4.0E-06 GGATGCCATTTTTAACACCT 20 TBX5_TBX_DBD_dimeric_20_1 SELEX - 115994033 115994052 3.0E-06 AGGTGTTAAAAATGGCATCC 20 FOXL1_forkhead_full_dimeric_13_1 SELEX - 115999070 115999082 9.0E-06 TGCAAATAAAAAA 13 EWSR1-FLI1_MA0149.1 JASPAR - 115994000 115994017 1.0E-06 GGAAGCAAGCAAGCATGG 6 STAT1_MA0137.2 JASPAR - 115994101 115994115 3.0E-06 CACTTCCTGGAAGGT 15 Pax4_MA0068.1 JASPAR - 116003501 116003530 7.0E-06 AAATAAAAGCCAAAACAAAGCTACTTTTTA 30 SPIB_ETS_DBD_monomeric_14_1 SELEX + 115998502 115998515 6.0E-06 AAAAAAAGGAAATG 14 EOMES_TBX_DBD_monomeric_13_1 SELEX - 115994041 115994053 1.0E-06 AAGGTGTTAAAAA 13 T_MA0009.1 JASPAR - 115994044 115994054 7.0E-06 CAAGGTGTTAA 11 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 115999071 115999081 8.0E-06 GCAAATAAAAA 11 ELF3_ETS_full_monomeric_13_1 SELEX + 115994104 115994116 8.0E-06 TTCCAGGAAGTGA 13 TBR1_TBX_full_monomeric_11_1 SELEX - 115994043 115994053 1.0E-06 AAGGTGTTAAA 11 NFATC1_NFAT_full_dimeric_20_1 SELEX + 116003541 116003560 4.0E-06 CACGGAAAATGTAATTCCTG 20 TBX4_TBX_DBD_dimeric_20_1 SELEX + 115994033 115994052 9.0E-06 GGATGCCATTTTTAACACCT 20 TBX4_TBX_DBD_dimeric_20_1 SELEX - 115994033 115994052 5.0E-06 AGGTGTTAAAAATGGCATCC 20 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 115999071 115999081 8.0E-06 GCAAATAAAAA 11 Mycn_MA0104.2 JASPAR + 115999204 115999213 8.0E-06 CCCACGTGGC 10 POU1F1_POU_DBD_monomeric_17_1 SELEX + 115994194 115994210 1.0E-06 TCCATGAATACTTAGTT 17 TBX21_TBX_full_monomeric_10_1 SELEX - 115994044 115994053 4.0E-06 AAGGTGTTAA 10 TBX2_TBX_full_monomeric_11_1 SELEX - 115994043 115994053 0.0E+00 AAGGTGTTAAA 11 Stat3_MA0144.1 JASPAR - 115994103 115994112 2.0E-06 TTCCTGGAAG 10 Stat3_MA0144.1 JASPAR + 115994104 115994113 1.0E-06 TTCCAGGAAG 10 TBX2_TBX_full_dimeric_18_1 SELEX - 115994034 115994051 5.0E-06 GGTGTTAAAAATGGCATC 18 SPDEF_ETS_full_putative-multimer_16_1 SELEX - 116003523 116003538 7.0E-06 ACAGGAAGAAATAAAA 16 CREB3L1_bZIP_full_dimeric_12_1 SELEX + 115999203 115999214 2.0E-06 TCCCACGTGGCA 12 CREB3L1_bZIP_full_dimeric_12_1 SELEX - 115999203 115999214 2.0E-06 TGCCACGTGGGA 12 TBX20_TBX_DBD_monomeric_15_1 SELEX - 115994042 115994056 3.0E-06 CACAAGGTGTTAAAA 15 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX - 115999071 115999080 9.0E-06 CAAATAAAAA 10 CPEB1_RRM_full_monomeric_8_1 SELEX - 115999071 115999078 4.0E-06 AATAAAAA 8 IRF3_IRF_full_trimeric_21_1 SELEX + 115998502 115998522 0.0E+00 AAAAAAAGGAAATGGAAAACC 21 SNAI2_C2H2_DBD_monomeric_9_1 SELEX + 115999195 115999203 3.0E-06 AACAGGTGT 9 MSC_bHLH_full_dimeric_10_1 SELEX - 115999195 115999204 1.0E-05 GACACCTGTT 10 V_NFAT_Q4_01_M00935 TRANSFAC + 116003572 116003581 3.0E-06 GTGGAAATTT 10 V_FOXP1_01_M00987 TRANSFAC + 116003509 116003528 2.0E-06 AGCTTTGTTTTGGCTTTTAT 20 V_KLF15_Q2_M01714 TRANSFAC + 116003678 116003691 3.0E-06 GATCAGGGGCGTGG 14 V_SPI1_01_M01203 TRANSFAC + 115998502 115998518 1.0E-05 AAAAAAAGGAAATGGAA 17 V_FLI1_Q6_M01208 TRANSFAC + 115994107 115994117 2.0E-06 CAGGAAGTGAG 11 V_HMGIY_Q3_M01010 TRANSFAC + 116003571 116003585 0.0E+00 AGTGGAAATTTTTGT 15 V_NKX29_01_M01352 TRANSFAC - 115999059 115999075 1.0E-06 AAAAAAGTACTTCACTT 17 V_NKX29_01_M01352 TRANSFAC + 115999060 115999076 8.0E-06 AGTGAAGTACTTTTTTA 17 V_ETS_B_M00340 TRANSFAC + 115994105 115994118 7.0E-06 TCCAGGAAGTGAGA 14 V_HOXA13_02_M01297 TRANSFAC - 115999071 115999079 4.0E-06 AAATAAAAA 9 V_HOXA13_02_M01297 TRANSFAC - 116003522 116003530 9.0E-06 AAATAAAAG 9 V_EOMES_03_M02747 TRANSFAC - 115994040 115994056 0.0E+00 CACAAGGTGTTAAAAAT 17 V_IRF2_Q6_M01882 TRANSFAC + 115998502 115998517 7.0E-06 AAAAAAAGGAAATGGA 16 V_NERF_Q2_M00531 TRANSFAC + 115994104 115994121 7.0E-06 TTCCAGGAAGTGAGACAG 18 V_PU1_Q4_M01172 TRANSFAC - 115998503 115998521 0.0E+00 GTTTTCCATTTCCTTTTTT 19 V_TCFAP2E_04_M02926 TRANSFAC - 116003526 116003539 1.0E-05 CACAGGAAGAAATA 14 V_CDX_Q5_M00991 TRANSFAC - 116003524 116003541 9.0E-06 GACACAGGAAGAAATAAA 18 V_ETS_Q4_M00771 TRANSFAC - 115994107 115994118 3.0E-06 TCTCACTTCCTG 12 V_HELIOSA_02_M01004 TRANSFAC + 115998511 115998521 6.0E-06 AAATGGAAAAC 11 V_TCF3_04_M02816 TRANSFAC - 115994061 115994077 2.0E-06 TCTTCATCAAAAGGTTA 17 V_FOXA2_02_M02853 TRANSFAC + 116003729 116003743 3.0E-06 AGGAATAACAAGTGG 15 V_ZFP105_03_M02827 TRANSFAC - 115999068 115999082 4.0E-06 TGCAAATAAAAAAGT 15 V_TCFAP2C_03_M02821 TRANSFAC + 115994022 115994036 3.0E-06 TCACCCTGAGGGGAT 15 V_NFAT_Q6_M00302 TRANSFAC + 116003570 116003581 8.0E-06 CAGTGGAAATTT 12 V_AMEF2_Q6_M00403 TRANSFAC - 115994034 115994051 3.0E-06 GGTGTTAAAAATGGCATC 18 V_TBX5_02_M01020 TRANSFAC - 115994045 115994054 8.0E-06 CAAGGTGTTA 10 V_ASCL2_03_M02737 TRANSFAC - 116003621 116003637 9.0E-06 AGCACCAGCTGCACTTG 17 V_ELF5_01_M01197 TRANSFAC + 115998505 115998515 6.0E-06 AAAAGGAAATG 11 V_TEL2_Q6_M00678 TRANSFAC - 115994107 115994116 4.0E-06 TCACTTCCTG 10 V_TCF7_03_M02817 TRANSFAC - 115994061 115994077 4.0E-06 TCTTCATCAAAAGGTTA 17 V_MEF2_Q6_01_M00941 TRANSFAC + 115994036 115994047 5.0E-06 TGCCATTTTTAA 12 V_MYCN_01_M02259 TRANSFAC + 115999204 115999213 8.0E-06 CCCACGTGGC 10 V_BRACH_01_M00150 TRANSFAC - 115994041 115994064 1.0E-05 GTTAACACCACAAGGTGTTAAAAA 24 V_STAT3_03_M01595 TRANSFAC + 115994102 115994117 0.0E+00 CCTTCCAGGAAGTGAG 16 V_TBX5_01_M01019 TRANSFAC - 115994043 115994054 3.0E-06 CAAGGTGTTAAA 12 V_IRF7_01_M00453 TRANSFAC + 115998507 115998524 3.0E-06 AAGGAAATGGAAAACCTG 18 V_FOXL1_02_M02857 TRANSFAC - 116003509 116003524 9.0E-06 AAGCCAAAACAAAGCT 16 V_FOXJ3_06_M02855 TRANSFAC - 116003509 116003525 0.0E+00 AAAGCCAAAACAAAGCT 17 V_NKX3A_02_M01383 TRANSFAC - 115999059 115999075 1.0E-06 AAAAAAGTACTTCACTT 17 V_CBF_01_M01079 TRANSFAC + 116003566 116003581 3.0E-06 TGCACAGTGGAAATTT 16 V_GATA3_01_M00077 TRANSFAC - 115994081 115994089 4.0E-06 GAGATAGGG 9 V_TBP_04_M02918 TRANSFAC - 115998481 115998495 8.0E-06 CCGTTTTAAGCCACT 15 V_ETS1_B_M00339 TRANSFAC + 115994106 115994120 6.0E-06 CCAGGAAGTGAGACA 15 V_TCFAP2A_03_M02819 TRANSFAC + 115994022 115994036 6.0E-06 TCACCCTGAGGGGAT 15 V_MYF6_03_M02781 TRANSFAC + 115999191 115999206 2.0E-06 GACAAACAGGTGTCCC 16 V_SRF_06_M02916 TRANSFAC - 115999067 115999083 6.0E-06 CTGCAAATAAAAAAGTA 17 V_EWSR1FLI1_01_M02252 TRANSFAC - 115994000 115994017 1.0E-06 GGAAGCAAGCAAGCATGG 6 V_NMYC_01_M00055 TRANSFAC + 115999203 115999214 5.0E-06 TCCCACGTGGCA 12 V_SOX2_Q6_M01272 TRANSFAC + 116003506 116003521 9.0E-06 AGTAGCTTTGTTTTGG 16 V_MEF2A_05_M01301 TRANSFAC + 115994130 115994141 9.0E-06 GCTTATTATAAG 12 V_CP2_01_M00072 TRANSFAC - 116003558 116003568 1.0E-06 GCACTACCCAG 11 V_STAT1_05_M01260 TRANSFAC + 115994101 115994122 6.0E-06 ACCTTCCAGGAAGTGAGACAGA 22

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.