Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

CYP26C1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 340665 cytochrome P450, family 26, subfamily C, polypeptide 1 chr10 + 94816020 - 94821520 94821020 Transcription Factor Binding Sites   Download all TFBS in the CYP26C1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 94818149 94818166 9.0E-06 TGATTCAATGTTGATCTT 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 94818149 94818166 4.0E-06 AAGATCAACATTGAATCA 18 CTCF_MA0139.1 JASPAR + 94822524 94822542 4.0E-06 GCGCCTGCAGGGGGCGCTG 19 IRF7_IRF_DBD_dimeric_14_1 SELEX + 94822336 94822349 9.0E-06 GCGAAAGCAAAAGC 14 ZNF713_C2H2_full_monomeric_17_1 SELEX + 94822339 94822355 5.0E-06 AAAGCAAAAGCCAGGAA 17 PROX1_PROX_DBD_dimeric_12_1 SELEX + 94822254 94822265 1.0E-06 GAAGACTTCTTA 12 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 94818194 94818205 5.0E-06 TCTGTAAACAAA 12 FOXL1_forkhead_full_dimeric_13_1 SELEX - 94818191 94818203 2.0E-06 TGTAAACAAATTA 13 FOXO3_MA0157.1 JASPAR - 94818196 94818203 7.0E-06 TGTAAACA 8 FOXO1_forkhead_DBD_monomeric_8_1 SELEX - 94818195 94818202 7.0E-06 GTAAACAA 8 IRF1_MA0050.1 JASPAR + 94822338 94822349 5.0E-06 GAAAGCAAAAGC 12 PROP1_homeodomain_full_dimeric_11_1 SELEX - 94818191 94818201 3.0E-06 TAAACAAATTA 11 DRGX_homeodomain_DBD_dimeric_13_1 SELEX - 94818190 94818202 1.0E-05 GTAAACAAATTAC 13 PHOX2B_homeodomain_full_dimeric_11_1 SELEX - 94818191 94818201 9.0E-06 TAAACAAATTA 11 Alx4_homeodomain_DBD_dimeric_13_1 SELEX - 94818190 94818202 8.0E-06 GTAAACAAATTAC 13 PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX - 94818191 94818201 9.0E-06 TAAACAAATTA 11 FOXB1_forkhead_full_monomeric_9_1 SELEX - 94818195 94818203 2.0E-06 TGTAAACAA 9 REST_MA0138.2 JASPAR + 94825415 94825435 9.0E-06 TAAAGCACCAAGAAGAGTGCT 21 FOXO3_forkhead_full_monomeric_8_1 SELEX - 94818195 94818202 7.0E-06 GTAAACAA 8 IRX5_homeodomain_DBD_dimeric_12_1 SELEX - 94821644 94821655 7.0E-06 TTACAAAACAAG 12 V_FREAC7_01_M00293 TRANSFAC - 94818192 94818207 9.0E-06 ATTCTGTAAACAAATT 16 V_FOXO3_02_M02270 TRANSFAC - 94818196 94818203 7.0E-06 TGTAAACA 8 V_FOXA2_04_M02749 TRANSFAC - 94818191 94818207 1.0E-06 ATTCTGTAAACAAATTA 17 V_CEBP_Q3_M00770 TRANSFAC + 94821645 94821656 7.0E-06 TTGTTTTGTAAA 12 V_HMGIY_Q3_M01010 TRANSFAC + 94818187 94818201 7.0E-06 ACAGTAATTTGTTTA 15 V_FOXO4_02_M00476 TRANSFAC + 94818192 94818205 8.0E-06 AATTTGTTTACAGA 14 V_IK_Q5_M01169 TRANSFAC + 94822293 94822302 5.0E-06 GTTGGGAGGG 10 V_PROP1_01_M01294 TRANSFAC + 94818191 94818201 1.0E-06 TAATTTGTTTA 11 V_FOXO3A_Q1_M01137 TRANSFAC - 94818192 94818203 0.0E+00 TGTAAACAAATT 12 V_FOXJ1_03_M02750 TRANSFAC - 94818190 94818205 1.0E-06 TCTGTAAACAAATTAC 16 V_BCL6_02_M01185 TRANSFAC + 94818940 94818953 1.0E-06 TACTTTCTTCAAAT 14 V_TST1_01_M00133 TRANSFAC + 94823593 94823607 2.0E-06 GCTGAATTACAGTGC 15 V_TCFAP2C_03_M02821 TRANSFAC + 94823608 94823622 2.0E-06 TTTCCCCGGGGGAAT 15 V_TCFAP2C_03_M02821 TRANSFAC - 94823608 94823622 2.0E-06 ATTCCCCCGGGGAAA 15 V_XFD3_01_M00269 TRANSFAC - 94818192 94818205 1.0E-06 TCTGTAAACAAATT 14 V_IRF3_Q3_M01279 TRANSFAC - 94822339 94822351 5.0E-06 TGGCTTTTGCTTT 13 V_BCL6_Q3_M01171 TRANSFAC - 94822236 94822245 8.0E-06 CTTTCTAGGT 10 V_REST_01_M01256 TRANSFAC - 94825418 94825439 4.0E-06 TCTAAGCACTCTTCTTGGTGCT 22 V_IRF3_06_M02871 TRANSFAC + 94822382 94822395 1.0E-06 GGAGAAAGGACCGG 14 V_XFD2_01_M00268 TRANSFAC - 94818192 94818205 7.0E-06 TCTGTAAACAAATT 14 V_CTCF_01_M01200 TRANSFAC + 94822523 94822542 1.0E-06 CGCGCCTGCAGGGGGCGCTG 20 V_FOXL1_02_M02857 TRANSFAC - 94821641 94821656 7.0E-06 TTTACAAAACAAGATC 16 V_FOXL1_04_M02753 TRANSFAC - 94818191 94818207 1.0E-06 ATTCTGTAAACAAATTA 17 V_DMRT7_01_M01151 TRANSFAC + 94818148 94818161 5.0E-06 ATGATTCAATGTTG 14 V_REST_02_M02256 TRANSFAC + 94825415 94825435 9.0E-06 TAAAGCACCAAGAAGAGTGCT 21 V_TCFAP2A_03_M02819 TRANSFAC + 94823608 94823622 2.0E-06 TTTCCCCGGGGGAAT 15 V_TCFAP2A_03_M02819 TRANSFAC - 94823608 94823622 1.0E-06 ATTCCCCCGGGGAAA 15 V_PUR1_Q4_M01721 TRANSFAC + 94821803 94821811 6.0E-06 GGGACAGTG 9 V_EFC_Q6_M00626 TRANSFAC - 94822100 94822113 5.0E-06 AGTTACCAGGGACC 14 V_FOXO4_01_M00472 TRANSFAC - 94818192 94818202 4.0E-06 GTAAACAAATT 11 V_FOXK1_03_M02752 TRANSFAC - 94818191 94818207 3.0E-06 ATTCTGTAAACAAATTA 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.