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CCDC39 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 339829 coiled-coil domain containing 39 chr3 - 180396783 - 180402283 180397283 Transcription Factor Binding Sites   Download all TFBS in the CCDC39 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX4_HMG_DBD_dimeric_16_1 SELEX + 180397921 180397936 8.0E-06 TAACATTTAAAGTGTG 16 ESRRA_nuclearreceptor_DBD_dimeric_19_1 SELEX - 180397291 180397309 9.0E-06 TAAGGACGCGGGAAGGTTG 19 FLI1_ETS_full_monomeric_10_1 SELEX - 180397345 180397354 5.0E-06 ACCGGAAGTT 10 ETV5_ETS_DBD_monomeric_10_1 SELEX - 180397345 180397354 3.0E-06 ACCGGAAGTT 10 ERG_ETS_full_monomeric_10_1 SELEX - 180397345 180397354 4.0E-06 ACCGGAAGTT 10 ETV3_ETS_DBD_monomeric_10_1 SELEX - 180397345 180397354 5.0E-06 ACCGGAAGTT 10 ELF4_ETS_full_monomeric_12_1 SELEX - 180397345 180397356 8.0E-06 CAACCGGAAGTT 12 IRF8_IRF_full_dimeric_14_1 SELEX + 180397335 180397348 4.0E-06 CCGAAGGCGAAACT 14 FEV_ETS_DBD_monomeric_10_1 SELEX - 180397345 180397354 3.0E-06 ACCGGAAGTT 10 TBX1_TBX_DBD_dimeric_23_1 SELEX - 180397917 180397939 9.0E-06 TTCCACACTTTAAATGTTAGCAA 23 HINFP1_C2H2_full_dimeric_20_1 SELEX + 180397827 180397846 7.0E-06 GCGGACCGCGCGGAGGCCGC 20 HINFP1_C2H2_full_dimeric_20_1 SELEX - 180397827 180397846 2.0E-06 GCGGCCTCCGCGCGGTCCGC 20 ETV1_ETS_DBD_monomeric_10_1 SELEX - 180397345 180397354 3.0E-06 ACCGGAAGTT 10 POU1F1_POU_DBD_monomeric_14_1 SELEX - 180398065 180398078 3.0E-06 GTAATTCAAATTAG 14 Sox17_HMG_DBD_dimeric_15_1 SELEX + 180397922 180397936 7.0E-06 AACATTTAAAGTGTG 15 ETV2_ETS_DBD_monomeric_11_1 SELEX - 180397345 180397355 3.0E-06 AACCGGAAGTT 11 ESRRG_nuclearreceptor_full_dimeric_18_1 SELEX - 180397291 180397308 7.0E-06 AAGGACGCGGGAAGGTTG 18 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 180397918 180397931 9.0E-06 TGCTAACATTTAAA 14 HOXA5_MA0158.1 JASPAR + 180398063 180398070 7.0E-06 CACTAATT 8 ETS1_ETS_full_monomeric_10_1 SELEX - 180397345 180397354 9.0E-06 ACCGGAAGTT 10 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX + 180397921 180397936 5.0E-06 TAACATTTAAAGTGTG 16 NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 180397921 180397936 5.0E-06 CACACTTTAAATGTTA 16 ETV4_ETS_DBD_monomeric_10_1 SELEX - 180397345 180397354 4.0E-06 ACCGGAAGTT 10 ELK4_ETS_DBD_monomeric_10_1 SELEX - 180397345 180397354 4.0E-06 ACCGGAAGTT 10 ELK4_MA0076.1 JASPAR - 180397346 180397354 4.0E-06 ACCGGAAGT 9 NFATC1_NFAT_full_dimeric_20_1 SELEX - 180396167 180396186 8.0E-06 AACGGAACAGAAAGTTTTCT 20 SOX9_HMG_full_dimeric_16_3 SELEX - 180397167 180397182 5.0E-06 ATCCGTTTGCAGTCAT 16 POU3F1_POU_DBD_monomeric_12_1 SELEX - 180398066 180398077 5.0E-06 TAATTCAAATTA 12 IRF9_IRF_full_trimeric_15_1 SELEX - 180396172 180396186 6.0E-06 AACGGAACAGAAAGT 15 ERF_ETS_DBD_monomeric_10_1 SELEX - 180397345 180397354 4.0E-06 ACCGGAAGTT 10 ELK1_ETS_full_monomeric_10_1 SELEX - 180397345 180397354 3.0E-06 ACCGGAAGTT 10 EHF_ETS_full_monomeric_12_1 SELEX - 180397345 180397356 7.0E-06 CAACCGGAAGTT 12 ELF5_ETS_full_monomeric_11_1 SELEX - 180397345 180397355 2.0E-06 AACCGGAAGTT 11 GABPA_ETS_full_monomeric_10_1 SELEX - 180397345 180397354 3.0E-06 ACCGGAAGTT 10 IRF4_IRF_full_dimeric_15_1 SELEX + 180397335 180397349 9.0E-06 CCGAAGGCGAAACTT 15 Sox11_HMG_DBD_dimeric_15_1 SELEX + 180397922 180397936 8.0E-06 AACATTTAAAGTGTG 15 Elk3_ETS_DBD_monomeric_10_1 SELEX - 180397345 180397354 3.0E-06 ACCGGAAGTT 10 IRF3_IRF_full_trimeric_21_1 SELEX - 180396171 180396191 4.0E-06 TGTAAAACGGAACAGAAAGTT 21 POU3F2_POU_DBD_monomeric_12_1 SELEX - 180398066 180398077 8.0E-06 TAATTCAAATTA 12 Hic1_C2H2_DBD_dimeric_18_1 SELEX - 180398082 180398099 1.0E-06 ATGCCTACCCGTGCCAAG 18 HMBOX1_homeodomain_DBD_monomeric_10_1 SELEX + 180397306 180397315 7.0E-06 CTTAGTTACC 10 V_ERG_03_M02062 TRANSFAC - 180397345 180397354 3.0E-06 ACCGGAAGTT 10 V_ERM_01_M01992 TRANSFAC - 180397345 180397354 2.0E-06 ACCGGAAGTT 10 V_ELK1_04_M01165 TRANSFAC - 180397345 180397355 2.0E-06 AACCGGAAGTT 11 V_FOXP3_Q4_M00992 TRANSFAC + 180397379 180397395 4.0E-06 AAGAATCTTTTTCTTAC 17 V_GABPA_02_M02074 TRANSFAC - 180397345 180397354 1.0E-05 ACCGGAAGTT 10 V_CETS1_01_M01986 TRANSFAC - 180397345 180397354 5.0E-06 ACCGGAAGTT 10 V_SPIB_02_M02041 TRANSFAC - 180397957 180397966 4.0E-06 AGAGGAAATA 10 V_AR_Q6_01_M01996 TRANSFAC + 180396170 180396184 6.0E-06 AAACTTTCTGTTCCG 15 V_ETV3_01_M01990 TRANSFAC - 180397345 180397354 6.0E-06 ACCGGAAGTT 10 V_CEBP_01_M00159 TRANSFAC - 180397308 180397320 2.0E-06 TGTTTGGTAACTA 13 V_RFX4_03_M02789 TRANSFAC + 180397283 180397297 6.0E-06 AGCCCTAGCAACCTT 15 V_ZFP691_03_M02833 TRANSFAC - 180397394 180397410 9.0E-06 CCCTCAGTGCTCAAGGT 17 V_CETS2_02_M02064 TRANSFAC - 180397345 180397354 4.0E-06 ACCGGAAGTT 10 V_PEA3_01_M01991 TRANSFAC - 180397345 180397354 4.0E-06 ACCGGAAGTT 10 V_CETS1P54_02_M00074 TRANSFAC - 180397344 180397356 1.0E-06 CAACCGGAAGTTT 13 V_SPIC_01_M02042 TRANSFAC - 180397957 180397966 7.0E-06 AGAGGAAATA 10 V_FLI1_01_M02038 TRANSFAC - 180397345 180397354 7.0E-06 ACCGGAAGTT 10 V_ELK1_06_M02059 TRANSFAC - 180397345 180397354 2.0E-06 ACCGGAAGTT 10 V_RFXDC2_04_M02894 TRANSFAC + 180397303 180397319 5.0E-06 GTCCTTAGTTACCAAAC 17 V_ELK1_05_M01981 TRANSFAC - 180397345 180397354 2.0E-06 ACCGGAAGTT 10 V_SAP1A_02_M01983 TRANSFAC - 180397345 180397354 3.0E-06 ACCGGAAGTT 10 V_FLI1_02_M02073 TRANSFAC - 180397345 180397354 2.0E-06 ACCGGAAGTT 10 V_TCFAP2C_03_M02821 TRANSFAC + 180397583 180397597 1.0E-06 ATTGCCTGGGGGAAG 15 V_PET1_02_M02072 TRANSFAC - 180397345 180397354 4.0E-06 ACCGGAAGTT 10 V_CART1_01_M00416 TRANSFAC + 180398063 180398080 0.0E+00 CACTAATTTGAATTACCT 18 V_CART1_01_M00416 TRANSFAC - 180398063 180398080 0.0E+00 AGGTAATTCAAATTAGTG 18 V_SOX1_04_M02906 TRANSFAC - 180397918 180397932 9.0E-06 CTTTAAATGTTAGCA 15 V_ERF_01_M01984 TRANSFAC - 180397345 180397354 3.0E-06 ACCGGAAGTT 10 V_ER81_02_M02065 TRANSFAC - 180397345 180397354 5.0E-06 ACCGGAAGTT 10 V_RFX4_04_M02893 TRANSFAC + 180397303 180397317 9.0E-06 GTCCTTAGTTACCAA 15 V_ERG_01_M01752 TRANSFAC - 180397346 180397354 4.0E-06 ACCGGAAGT 9 V_GABPA_01_M02039 TRANSFAC - 180397345 180397354 7.0E-06 ACCGGAAGTT 10 V_CETS2_01_M01989 TRANSFAC - 180397345 180397354 5.0E-06 ACCGGAAGTT 10 V_HOX13_01_M00023 TRANSFAC + 180397984 180398013 3.0E-06 TGACACAATCCCCATTATCAAAAGGCAATG 30 V_PET1_01_M02037 TRANSFAC - 180397345 180397354 4.0E-06 ACCGGAAGTT 10 V_HOXA5_03_M02271 TRANSFAC + 180398063 180398070 7.0E-06 CACTAATT 8 V_ELK1_02_M00025 TRANSFAC - 180397344 180397357 0.0E+00 TCAACCGGAAGTTT 14 V_SRF_Q5_02_M01007 TRANSFAC + 180396147 180396165 7.0E-06 ATTTTCCTTTTTTAGAGCT 19 V_PEA3_02_M02066 TRANSFAC - 180397345 180397354 4.0E-06 ACCGGAAGTT 10 V_ERF_02_M02061 TRANSFAC - 180397345 180397354 8.0E-06 ACCGGAAGTT 10 V_SRF_03_M01304 TRANSFAC - 180396151 180396163 4.0E-06 CTCTAAAAAAGGA 13 V_ER71_01_M01988 TRANSFAC - 180397345 180397354 7.0E-06 ACCGGAAGTT 10 V_NET_01_M01982 TRANSFAC - 180397345 180397354 6.0E-06 ACCGGAAGTT 10 V_ER81_01_M01987 TRANSFAC - 180397345 180397354 6.0E-06 ACCGGAAGTT 10 V_HBP1_04_M02866 TRANSFAC + 180397990 180398006 4.0E-06 AATCCCCATTATCAAAA 17 V_ZFP105_04_M02931 TRANSFAC + 180398057 180398073 4.0E-06 CCAGTTCACTAATTTGA 17 V_ERM_02_M02069 TRANSFAC - 180397345 180397354 2.0E-06 ACCGGAAGTT 10 V_MTF1_06_M02882 TRANSFAC - 180397384 180397397 8.0E-06 AGGTAAGAAAAAGA 14 V_EHF_06_M02745 TRANSFAC - 180397344 180397358 4.0E-06 CTCAACCGGAAGTTT 15 V_PARP_Q3_M01211 TRANSFAC - 180397385 180397394 3.0E-06 TAAGAAAAAG 10 V_RBPJK_01_M01112 TRANSFAC + 180397503 180397513 8.0E-06 AGCGTGTGAAA 11 V_STAT1STAT1_Q3_M01212 TRANSFAC + 180397467 180397479 2.0E-06 CTTTCCACGAAAA 13 V_SAP1A_03_M02058 TRANSFAC - 180397345 180397354 4.0E-06 ACCGGAAGTT 10 V_SRF_02_M01257 TRANSFAC - 180396146 180396163 2.0E-06 CTCTAAAAAAGGAAAATG 18 V_TCFAP2A_03_M02819 TRANSFAC + 180397583 180397597 0.0E+00 ATTGCCTGGGGGAAG 15 V_CETS1_02_M02063 TRANSFAC - 180397345 180397354 2.0E-06 ACCGGAAGTT 10 V_RFX3_05_M02892 TRANSFAC + 180397299 180397321 2.0E-06 CCGCGTCCTTAGTTACCAAACAG 23 V_NET_02_M02060 TRANSFAC - 180397345 180397354 2.0E-06 ACCGGAAGTT 10 V_ERG_02_M01985 TRANSFAC - 180397345 180397354 9.0E-06 ACCGGAAGTT 10 V_TCFAP2E_03_M02822 TRANSFAC + 180397583 180397597 3.0E-06 ATTGCCTGGGGGAAG 15 V_ELK1_03_M01163 TRANSFAC - 180397345 180397355 1.0E-06 AACCGGAAGTT 11 V_ER71_02_M02067 TRANSFAC - 180397345 180397354 5.0E-06 ACCGGAAGTT 10 V_RFX1_02_M00281 TRANSFAC + 180397279 180397296 4.0E-06 GGGGAGCCCTAGCAACCT 18 V_SPI1_02_M02043 TRANSFAC - 180397957 180397966 3.0E-06 AGAGGAAATA 10

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