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LINGO4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 339398 leucine rich repeat and Ig domain containing 4 chr1 - 151777382 - 151782882 151777882 Transcription Factor Binding Sites   Download all TFBS in the LINGO4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints EOMES_TBX_DBD_dimeric_20_1 SELEX - 151782339 151782358 8.0E-06 TGACACAATCAGAGCTGTCA 20 NF-kappaB_MA0061.1 JASPAR - 151775922 151775931 9.0E-06 GGGGATTCCC 10 ZNF713_C2H2_full_monomeric_17_1 SELEX - 151782350 151782366 2.0E-06 TAGAAAAATGACACAAT 17 POU3F3_POU_DBD_monomeric_12_1 SELEX + 151782284 151782295 6.0E-06 TTGAATAATTAC 12 EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 151782289 151782302 3.0E-06 TAATTACATAAATG 14 EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 151782289 151782302 9.0E-06 CATTTATGTAATTA 14 Arx_homeodomain_DBD_dimeric_13_1 SELEX + 151782288 151782300 4.0E-06 ATAATTACATAAA 13 LHX2_homeodomain_DBD_dimeric_15_1 SELEX + 151782289 151782303 2.0E-06 TAATTACATAAATGG 15 LHX2_homeodomain_DBD_dimeric_15_1 SELEX - 151782289 151782303 8.0E-06 CCATTTATGTAATTA 15 NFKB1_MA0105.1 JASPAR - 151775921 151775931 9.0E-06 GGGGATTCCCA 11 Alx1_homeodomain_DBD_dimeric_13_1 SELEX + 151782288 151782300 6.0E-06 ATAATTACATAAA 13 NFIL3_MA0025.1 JASPAR - 151782289 151782299 1.0E-06 TTATGTAATTA 11 SOX9_HMG_DBD_monomeric_9_1 SELEX - 151782723 151782731 4.0E-06 GAACAATAG 9 ISX_homeodomain_DBD_dimeric_13_1 SELEX - 151782288 151782300 2.0E-06 TTTATGTAATTAT 13 ALX3_homeodomain_full_dimeric_13_1 SELEX + 151782288 151782300 5.0E-06 ATAATTACATAAA 13 DRGX_homeodomain_DBD_dimeric_13_1 SELEX + 151782288 151782300 1.0E-05 ATAATTACATAAA 13 DRGX_homeodomain_DBD_dimeric_13_1 SELEX - 151782288 151782300 9.0E-06 TTTATGTAATTAT 13 MEOX2_homeodomain_DBD_monomeric_10_1 SELEX - 151782287 151782296 7.0E-06 TGTAATTATT 10 PHOX2B_homeodomain_full_dimeric_11_1 SELEX - 151782289 151782299 6.0E-06 TTATGTAATTA 11 Alx4_homeodomain_DBD_dimeric_13_1 SELEX + 151782288 151782300 3.0E-06 ATAATTACATAAA 13 ATF4_bZIP_DBD_dimeric_13_1 SELEX - 151782778 151782790 9.0E-06 GAATGATGTAAGA 13 POU1F1_POU_DBD_monomeric_17_1 SELEX + 151782281 151782297 6.0E-06 TGCTTGAATAATTACAT 17 PRRX1_homeodomain_full_dimeric_11_1 SELEX - 151782289 151782299 5.0E-06 TTATGTAATTA 11 CART1_homeodomain_DBD_dimeric_13_1 SELEX - 151782288 151782300 2.0E-06 TTTATGTAATTAT 13 Uncx_homeodomain_DBD_dimeric_13_1 SELEX - 151782288 151782300 2.0E-06 TTTATGTAATTAT 13 EN1_homeodomain_full_dimeric_14_1 SELEX + 151782289 151782302 7.0E-06 TAATTACATAAATG 14 POU3F1_POU_DBD_monomeric_12_2 SELEX + 151782284 151782295 8.0E-06 TTGAATAATTAC 12 PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX - 151782289 151782299 4.0E-06 TTATGTAATTA 11 SOX9_MA0077.1 JASPAR - 151782723 151782731 9.0E-06 GAACAATAG 9 EMX1_homeodomain_DBD_dimeric_14_1 SELEX + 151782289 151782302 4.0E-06 TAATTACATAAATG 14 EMX1_homeodomain_DBD_dimeric_14_1 SELEX - 151782289 151782302 8.0E-06 CATTTATGTAATTA 14 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 151782288 151782298 5.0E-06 TATGTAATTAT 11 Zfx_MA0146.1 JASPAR - 151775760 151775773 6.0E-06 GGAGCTGAGGCCTG 14 V_TGIF_01_M00418 TRANSFAC - 151782336 151782346 2.0E-06 AGCTGTCATTT 11 V_MEIS1_02_M01419 TRANSFAC - 151782335 151782350 5.0E-06 TCAGAGCTGTCATTTA 16 V_PREP1_01_M01459 TRANSFAC - 151782335 151782350 7.0E-06 TCAGAGCTGTCATTTA 16 V_NF1_Q6_01_M00806 TRANSFAC + 151775856 151775872 1.0E-05 GTGGACAACTGCCAAGC 17 V_NF1A_Q6_M02103 TRANSFAC - 151782261 151782276 3.0E-06 TTTGCTATGTGCCAGG 16 V_DLX3_01_M01400 TRANSFAC + 151782283 151782299 3.0E-06 CTTGAATAATTACATAA 17 V_HMGIY_Q3_M01010 TRANSFAC - 151782322 151782336 1.0E-05 TAGGCAATTTACTTT 15 V_PROP1_01_M01294 TRANSFAC + 151782289 151782299 6.0E-06 TAATTACATAA 11 V_POU1F1_Q6_M00744 TRANSFAC + 151782284 151782293 8.0E-06 TTGAATAATT 10 V_DLX2_01_M01468 TRANSFAC - 151782283 151782298 7.0E-06 TATGTAATTATTCAAG 16 V_DLX2_01_M01468 TRANSFAC + 151782285 151782300 2.0E-06 TGAATAATTACATAAA 16 V_AFP1_Q6_M00616 TRANSFAC + 151782287 151782297 3.0E-06 AATAATTACAT 11 V_PAX6_02_M01391 TRANSFAC + 151782285 151782300 9.0E-06 TGAATAATTACATAAA 16 V_PAX4_01_M00373 TRANSFAC - 151782749 151782769 6.0E-06 GGCATTCATGGGGGTGGGGCA 21 V_GC_01_M00255 TRANSFAC - 151775767 151775780 4.0E-06 TGGGGGTGGAGCTG 14 V_SOX7_03_M02807 TRANSFAC - 151782716 151782737 3.0E-06 CTTAGGGAACAATAGGAGCAAA 22 V_MEIS2_01_M01488 TRANSFAC - 151782335 151782350 3.0E-06 TCAGAGCTGTCATTTA 16 V_POU3F2_01_M00463 TRANSFAC + 151782284 151782297 6.0E-06 TTGAATAATTACAT 14 V_DBP_Q6_01_M01872 TRANSFAC - 151782292 151782299 5.0E-06 TTATGTAA 8 V_TGIF_02_M01346 TRANSFAC + 151782334 151782350 4.0E-06 CTAAATGACAGCTCTGA 17 V_DBX2_01_M01360 TRANSFAC - 151782285 151782300 7.0E-06 TTTATGTAATTATTCA 16 V_E4BP4_01_M00045 TRANSFAC - 151782778 151782789 1.0E-05 AATGATGTAAGA 12 V_GATA3_05_M02859 TRANSFAC - 151775825 151775846 6.0E-06 TTGGGGAGATTGGATCTTGTTA 22 V_NFKAPPAB50_01_M00051 TRANSFAC - 151775922 151775931 2.0E-06 GGGGATTCCC 10 V_STAF_02_M00264 TRANSFAC - 151775908 151775928 9.0E-06 GATTCCCAGCTTCCCAGTCAA 21 V_TGIF1_01_M03111 TRANSFAC + 151782334 151782350 4.0E-06 CTAAATGACAGCTCTGA 17 V_SOX9_B1_M00410 TRANSFAC - 151782721 151782734 4.0E-06 AGGGAACAATAGGA 14 V_DLX7_01_M01486 TRANSFAC + 151782283 151782299 7.0E-06 CTTGAATAATTACATAA 17 V_S8_01_M00099 TRANSFAC - 151782285 151782300 3.0E-06 TTTATGTAATTATTCA 16 V_SOX15_03_M02799 TRANSFAC - 151782719 151782735 8.0E-06 TAGGGAACAATAGGAGC 17 V_HOXB8_01_M01451 TRANSFAC - 151782284 151782299 8.0E-06 TTATGTAATTATTCAA 16 V_ZFP281_01_M01597 TRANSFAC - 151782751 151782761 1.0E-06 TGGGGGTGGGG 11 V_SOX21_04_M02907 TRANSFAC + 151782720 151782736 3.0E-06 CTCCTATTGTTCCCTAA 17 V_TBX22_01_M01195 TRANSFAC + 151782343 151782361 8.0E-06 AGCTCTGATTGTGTCATTT 19 V_NFKAPPAB_01_M00054 TRANSFAC - 151775922 151775931 9.0E-06 GGGGATTCCC 10 V_DLX3_02_M02051 TRANSFAC + 151782288 151782295 5.0E-06 ATAATTAC 8 V_IRF1_01_M00062 TRANSFAC - 151782352 151782364 5.0E-06 GAAAAATGACACA 13 V_MOX1_01_M01443 TRANSFAC - 151782283 151782298 3.0E-06 TATGTAATTATTCAAG 16 V_PAX4_02_M00377 TRANSFAC + 151782286 151782296 1.0E-06 GAATAATTACA 11 V_PIT1_Q6_M00802 TRANSFAC + 151782279 151782296 1.0E-05 CCTGCTTGAATAATTACA 18 V_SRY_05_M02917 TRANSFAC - 151782720 151782736 0.0E+00 TTAGGGAACAATAGGAG 17 V_HOXD3_01_M01338 TRANSFAC - 151782285 151782300 9.0E-06 TTTATGTAATTATTCA 16 V_DLX1_01_M01439 TRANSFAC - 151782287 151782300 2.0E-06 TTTATGTAATTATT 14 V_PBX1_04_M01357 TRANSFAC + 151782778 151782794 3.0E-06 TCTTACATCATTCATGG 17 V_MIF1_01_M00279 TRANSFAC + 151782315 151782332 1.0E-05 TGGTTCCAAAGTAAATTG 18 V_TCF11_01_M00285 TRANSFAC + 151782355 151782367 1.0E-06 GTCATTTTTCTAG 13 V_HOXC8_01_M01321 TRANSFAC - 151782285 151782300 8.0E-06 TTTATGTAATTATTCA 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.