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LRRC30 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 339291 leucine rich repeat containing 30 chr18 + 7226136 - 7231636 7231136 Transcription Factor Binding Sites   Download all TFBS in the LRRC30 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints PKNOX1_MEIS_DBD_dimeric_12_1 SELEX + 7230804 7230815 8.0E-06 TGACAGCTGCCT 12 RARA_nuclearreceptor_full_dimeric_18_1 SELEX - 7234374 7234391 6.0E-06 CAAGGTCATGGAAATTCA 18 RARG_nuclearreceptor_full_dimeric_17_1 SELEX - 7234374 7234390 1.0E-06 AAGGTCATGGAAATTCA 17 Rarb_nuclearreceptor_DBD_dimeric_18_1 SELEX - 7234374 7234391 6.0E-06 CAAGGTCATGGAAATTCA 18 TGIF2_MEIS_DBD_dimeric_12_1 SELEX + 7230804 7230815 7.0E-06 TGACAGCTGCCT 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 7230804 7230815 9.0E-06 AGGCAGCTGTCA 12 Pax4_MA0068.1 JASPAR + 7235199 7235228 7.0E-06 GAATAATATTGCTAAATGCATAATACTGCA 30 RORA_nuclearreceptor_DBD_dimeric_19_1 SELEX - 7234205 7234223 8.0E-06 CCATTGAGTCAGGAGGTCA 19 MEF2B_MADS_full_dimeric_12_1 SELEX - 7234174 7234185 8.0E-06 TCTTTAAATAGT 12 RARG_nuclearreceptor_DBD_dimeric_17_2 SELEX - 7234374 7234390 4.0E-06 AAGGTCATGGAAATTCA 17 MEF2A_MA0052.1 JASPAR + 7234175 7234184 4.0E-06 CTATTTAAAG 10 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX - 7234555 7234564 9.0E-06 CTTATAAAAA 10 ESRRG_nuclearreceptor_full_monomeric_10_1 SELEX - 7234383 7234392 1.0E-05 GCAAGGTCAT 10 MAFK_bZIP_DBD_dimeric_21_1 SELEX + 7234433 7234453 8.0E-06 GTCCTGCTGAGCAATCATTTT 21 RARG_nuclearreceptor_DBD_dimeric_17_1 SELEX - 7234374 7234390 2.0E-06 AAGGTCATGGAAATTCA 17 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX - 7234204 7234219 6.0E-06 TGAGTCAGGAGGTCAA 16 NRL_bZIP_DBD_monomeric_11_1 SELEX - 7233661 7233671 8.0E-06 TATTTGCTTAC 11 HOXA13_homeodomain_full_monomeric_10_1 SELEX - 7234555 7234564 7.0E-06 CTTATAAAAA 10 Myf_MA0055.1 JASPAR + 7234089 7234100 3.0E-06 CAGCAACTGGAG 12 HOXA13_homeodomain_full_monomeric_11_1 SELEX - 7234555 7234565 4.0E-06 TCTTATAAAAA 11 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX - 7234555 7234564 6.0E-06 CTTATAAAAA 10 V_HOXA9_01_M01351 TRANSFAC - 7234445 7234461 2.0E-06 GAGGAAATAAAATGATT 17 V_MEQ_01_M02049 TRANSFAC - 7235085 7235093 7.0E-06 AACACACAC 9 V_HNF3B_01_M00131 TRANSFAC - 7233662 7233676 3.0E-06 TGTGCTATTTGCTTA 15 V_XVENT1_01_M00445 TRANSFAC - 7233663 7233675 4.0E-06 GTGCTATTTGCTT 13 V_FOXP3_Q4_M00992 TRANSFAC - 7234560 7234576 1.0E-06 ATCATTTTTTTTCTTAT 17 V_ATF5_01_M01295 TRANSFAC - 7235162 7235172 6.0E-06 CGTCTTCCTTT 11 V_HOXA13_02_M01297 TRANSFAC - 7234449 7234457 4.0E-06 AAATAAAAT 9 V_AR_Q6_01_M01996 TRANSFAC - 7233654 7233668 8.0E-06 TTGCTTACTGTTCTC 15 V_MEF2_02_M00231 TRANSFAC - 7234170 7234191 2.0E-06 CTGATGTCTTTAAATAGTCTTG 22 V_POU1F1_Q6_M00744 TRANSFAC + 7235214 7235223 9.0E-06 ATGCATAATA 10 V_CEBP_Q2_M00190 TRANSFAC + 7235204 7235217 2.0E-06 ATATTGCTAAATGC 14 V_PU1_Q4_M01172 TRANSFAC + 7234447 7234465 1.0E-06 TCATTTTATTTCCTCTCCT 19 V_HOXD13_01_M01404 TRANSFAC + 7230775 7230790 0.0E+00 CAGTCAATAAAACTCA 16 V_HOXD13_01_M01404 TRANSFAC - 7234552 7234567 6.0E-06 TTTCTTATAAAAAGTA 16 V_ATF4_Q2_M00514 TRANSFAC + 7234211 7234222 1.0E-06 CCTGACTCAATG 12 V_NFAT2_01_M01748 TRANSFAC - 7234376 7234384 5.0E-06 ATGGAAATT 9 V_TCFAP2E_04_M02926 TRANSFAC + 7234559 7234572 1.0E-06 TATAAGAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 7234560 7234573 9.0E-06 ATAAGAAAAAAAAT 14 V_HOXA13_03_M01430 TRANSFAC - 7234553 7234568 6.0E-06 TTTTCTTATAAAAAGT 16 V_HOXC13_01_M01317 TRANSFAC - 7234553 7234568 2.0E-06 TTTTCTTATAAAAAGT 16 V_CEBPB_01_M00109 TRANSFAC - 7235204 7235217 7.0E-06 GCATTTAGCAATAT 14 V_MEF2A_Q6_M02024 TRANSFAC + 7234176 7234185 4.0E-06 TATTTAAAGA 10 V_AR_03_M00956 TRANSFAC - 7233649 7233675 1.0E-05 GTGCTATTTGCTTACTGTTCTCTGGTT 27 V_STAT4_Q4_M01666 TRANSFAC + 7234558 7234571 3.0E-06 TTATAAGAAAAAAA 14 V_BARBIE_01_M00238 TRANSFAC - 7234547 7234561 8.0E-06 ATAAAAAGTATAATG 15 V_ELF4_04_M02850 TRANSFAC - 7234551 7234567 3.0E-06 TTTCTTATAAAAAGTAT 17 V_ELF4_04_M02850 TRANSFAC + 7234559 7234575 8.0E-06 TATAAGAAAAAAAATGA 17 V_TST1_01_M00133 TRANSFAC - 7233719 7233733 5.0E-06 GAGGAATTAGGGTTT 15 V_MYF_01_M01302 TRANSFAC + 7234089 7234100 3.0E-06 CAGCAACTGGAG 12 V_TGIF_02_M01346 TRANSFAC + 7230799 7230815 1.0E-06 GACAGTGACAGCTGCCT 17 V_TGIF_02_M01346 TRANSFAC - 7234292 7234308 3.0E-06 TTGTCTGACAGCTGCGT 17 V_CEBPE_Q6_M01868 TRANSFAC + 7235202 7235215 2.0E-06 TAATATTGCTAAAT 14 V_OCT1_02_M00136 TRANSFAC - 7235211 7235225 8.0E-06 AGTATTATGCATTTA 15 V_HOXB13_01_M01467 TRANSFAC + 7230775 7230790 4.0E-06 CAGTCAATAAAACTCA 16 V_ARID5A_03_M02736 TRANSFAC + 7235201 7235214 0.0E+00 ATAATATTGCTAAA 14 V_MRF2_01_M00454 TRANSFAC + 7235214 7235227 7.0E-06 ATGCATAATACTGC 14 V_HOXB9_01_M01426 TRANSFAC + 7230775 7230790 3.0E-06 CAGTCAATAAAACTCA 16 V_NKX25_Q5_M01043 TRANSFAC + 7234198 7234207 3.0E-06 TCTCACTTGA 10 V_MEF2_03_M00232 TRANSFAC - 7234170 7234191 1.0E-06 CTGATGTCTTTAAATAGTCTTG 22 V_HOX13_01_M00023 TRANSFAC - 7235189 7235218 2.0E-06 TGCATTTAGCAATATTATTCCTTGAACAGA 30 V_CDX1_01_M01373 TRANSFAC - 7234447 7234462 6.0E-06 AGAGGAAATAAAATGA 16 V_GR_01_M00955 TRANSFAC - 7233649 7233675 6.0E-06 GTGCTATTTGCTTACTGTTCTCTGGTT 27 V_MEF2_04_M00233 TRANSFAC - 7234170 7234191 5.0E-06 CTGATGTCTTTAAATAGTCTTG 22 V_DAX1_01_M01248 TRANSFAC - 7234378 7234397 8.0E-06 CCACAGCAAGGTCATGGAAA 20 V_ERBETA_Q5_M01875 TRANSFAC + 7234527 7234541 6.0E-06 TTGAAGGTGACCCAA 15 V_NKX3A_01_M00451 TRANSFAC - 7234549 7234560 7.0E-06 TAAAAAGTATAA 12 V_STAT4_Q5_M02117 TRANSFAC + 7234558 7234567 0.0E+00 TTATAAGAAA 10 V_TGIF1_01_M03111 TRANSFAC + 7230799 7230815 1.0E-06 GACAGTGACAGCTGCCT 17 V_TGIF1_01_M03111 TRANSFAC - 7234292 7234308 3.0E-06 TTGTCTGACAGCTGCGT 17 V_NEUROD_02_M01288 TRANSFAC - 7234414 7234425 3.0E-06 GTGCTGCTGTCC 12 V_GR_Q6_02_M01836 TRANSFAC - 7233653 7233665 4.0E-06 CTTACTGTTCTCT 13 V_MYOD_Q6_02_M02100 TRANSFAC - 7230804 7230812 4.0E-06 CAGCTGTCA 9 V_MYOD_Q6_02_M02100 TRANSFAC + 7234295 7234303 4.0E-06 CAGCTGTCA 9 V_MTF1_06_M02882 TRANSFAC + 7234558 7234571 0.0E+00 TTATAAGAAAAAAA 14 V_POU6F1_02_M01462 TRANSFAC - 7234540 7234556 2.0E-06 AAGTATAATGAGCTCTT 17 V_PKNOX2_01_M01411 TRANSFAC - 7230800 7230815 2.0E-06 AGGCAGCTGTCACTGT 16 V_CEBPA_01_M00116 TRANSFAC + 7235204 7235217 6.0E-06 ATATTGCTAAATGC 14 V_GFI1B_01_M01058 TRANSFAC + 7233684 7233695 9.0E-06 TAAATCAGTCAA 12 V_HDX_01_M01333 TRANSFAC + 7234438 7234454 7.0E-06 GCTGAGCAATCATTTTA 17 V_TCF7_04_M02921 TRANSFAC + 7234556 7234570 5.0E-06 TTTTATAAGAAAAAA 15 V_STAT1STAT1_Q3_M01212 TRANSFAC + 7234556 7234568 8.0E-06 TTTTATAAGAAAA 13 V_ESRRA_03_M02748 TRANSFAC - 7234379 7234395 5.0E-06 ACAGCAAGGTCATGGAA 17 V_OCT1_07_M00248 TRANSFAC - 7234376 7234387 7.0E-06 GTCATGGAAATT 12 V_SRF_06_M02916 TRANSFAC + 7234557 7234573 2.0E-06 TTTATAAGAAAAAAAAT 17 V_SRF_06_M02916 TRANSFAC + 7234558 7234574 7.0E-06 TTATAAGAAAAAAAATG 17 V_SRF_06_M02916 TRANSFAC + 7234559 7234575 2.0E-06 TATAAGAAAAAAAATGA 17 V_SRF_06_M02916 TRANSFAC + 7234560 7234576 2.0E-06 ATAAGAAAAAAAATGAT 17 V_HFH3_01_M00289 TRANSFAC - 7233662 7233674 6.0E-06 TGCTATTTGCTTA 13 V_POU6F1_03_M01479 TRANSFAC - 7234540 7234556 2.0E-06 AAGTATAATGAGCTCTT 17 V_VMAF_01_M00035 TRANSFAC - 7234434 7234452 9.0E-06 AAATGATTGCTCAGCAGGA 19 V_PIT1_Q6_M00802 TRANSFAC - 7235127 7235144 1.0E-06 TCTTCATAATTGTATGCC 18 V_HOXA10_01_M01464 TRANSFAC - 7234446 7234461 1.0E-06 GAGGAAATAAAATGAT 16 V_HOXD10_01_M01375 TRANSFAC + 7230775 7230791 2.0E-06 CAGTCAATAAAACTCAG 17 V_HOXD10_01_M01375 TRANSFAC - 7234445 7234461 4.0E-06 GAGGAAATAAAATGATT 17 V_LTF_Q6_M01692 TRANSFAC - 7234315 7234323 6.0E-06 GGCACTTGC 9 V_STAT1_05_M01260 TRANSFAC + 7234555 7234576 2.0E-06 TTTTTATAAGAAAAAAAATGAT 22 V_DMRT5_01_M01150 TRANSFAC + 7235104 7235118 5.0E-06 TTTCGAAACAGTTGC 15 V_NANOG_02_M01247 TRANSFAC + 7234555 7234574 2.0E-06 TTTTTATAAGAAAAAAAATG 20 V_HSF1_Q6_01_M02017 TRANSFAC - 7234134 7234147 6.0E-06 GAGAATTCTGGAGT 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.