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APOBEC1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
339 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 chr12 -7818002 - 7823502 7818502

Transcription Factor Binding Sites

 
Download all TFBS in the APOBEC1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
RARB_nuclearreceptor_full_dimeric_16_1 SELEX - 7819986 7820001 6.0E-06 AAAGTTCAGGAGTTCT 16
NR2F1_MA0017.1 JASPAR + 7819994 7820007 0.0E+00 TGAACTTTGAATCT 14
NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX + 7819994 7820009 4.0E-06 TGAACTTTGAATCTCA 16
NR4A2_nuclearreceptor_full_dimeric_16_1 SELEX - 7819994 7820009 8.0E-06 TGAGATTCAAAGTTCA 16
HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX - 7819992 7820007 1.0E-05 AGATTCAAAGTTCAGG 16
NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX - 7819994 7820007 6.0E-06 AGATTCAAAGTTCA 14
HNF4A_nuclearreceptor_full_dimeric_15_1 SELEX - 7819993 7820007 4.0E-06 AGATTCAAAGTTCAG 15
HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX - 7819994 7820007 4.0E-06 AGATTCAAAGTTCA 14
Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX - 7819994 7820008 3.0E-06 GAGATTCAAAGTTCA 15
RXRA_nuclearreceptor_full_dimeric_14_1 SELEX - 7819994 7820007 4.0E-06 AGATTCAAAGTTCA 14
V_COE1_Q6_M01871 TRANSFAC - 7819903 7819916 9.0E-06 ACTCAGAGGAATTT 14
V_HNF4ALPHA_Q6_M00638 TRANSFAC + 7819993 7820005 0.0E+00 CTGAACTTTGAAT 13
V_TR4_Q2_M01725 TRANSFAC + 7819992 7820002 3.0E-06 CCTGAACTTTG 11
V_TRF1_01_M01237 TRANSFAC - 7820026 7820040 9.0E-06 GTAGGATTCGGGTTT 15
V_HNF4_01_B_M00411 TRANSFAC - 7819993 7820007 8.0E-06 AGATTCAAAGTTCAG 15
V_COUP_01_M00158 TRANSFAC + 7819994 7820007 0.0E+00 TGAACTTTGAATCT 14
V_PNR_01_M01650 TRANSFAC - 7819994 7820007 5.0E-06 AGATTCAAAGTTCA 14
V_HNF4A_Q6_01_M02016 TRANSFAC - 7819991 7820005 6.0E-06 ATTCAAAGTTCAGGA 15
V_GCNF_01_M00526 TRANSFAC + 7819881 7819898 3.0E-06 CCCTGGGTCAAGTTCAAG 18
V_HNF4_Q6_01_M01031 TRANSFAC - 7819993 7820006 5.0E-06 GATTCAAAGTTCAG 14
V_ZBTB12_03_M02824 TRANSFAC - 7819979 7819995 3.0E-06 CAGGAGTTCTAGATTTG 17
V_PLZF_02_M01075 TRANSFAC - 7820037 7820065 8.0E-06 TTCATAACTAAGTAAAGTCTTGTATGTAG 29
V_LXRA_RXRA_Q3_M00647 TRANSFAC + 7819936 7819950 3.0E-06 ATTGAGGTCACTTTT 15
V_RXRLXRB_01_M01198 TRANSFAC - 7819994 7820006 5.0E-06 GATTCAAAGTTCA 13
V_HNF4_01_M00134 TRANSFAC - 7819991 7820009 1.0E-06 TGAGATTCAAAGTTCAGGA 19
V_SOX5_04_M02910 TRANSFAC - 7820052 7820066 2.0E-06 TTTCATAACTAAGTA 15
V_T3RALPHA_Q6_M01724 TRANSFAC + 7819936 7819946 6.0E-06 ATTGAGGTCAC 11
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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