Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

O3FAR1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 338557 free fatty acid receptor 4 chr10 + 95321421 - 95326921 95326421 Transcription Factor Binding Sites   Download all TFBS in the O3FAR1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints ZBTB7A_C2H2_DBD_monomeric_12_1 SELEX + 95326574 95326585 2.0E-06 GGCGACCACCGG 12 SPIC_ETS_full_monomeric_14_1 SELEX - 95325417 95325430 7.0E-06 TAAATGAGGAAGCT 14 ELF4_ETS_full_monomeric_12_1 SELEX - 95326295 95326306 2.0E-06 AACCAGGAAGTG 12 EWSR1-FLI1_MA0149.1 JASPAR - 95326390 95326407 4.0E-06 GGAAAGAGGGAGGGAGGC 18 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 95330185 95330196 8.0E-06 TTTAAAATTAGC 12 SCRT2_C2H2_DBD_monomeric_13_1 SELEX + 95330144 95330156 1.0E-05 AAGCAACAGGAGG 13 Pax4_MA0068.1 JASPAR - 95330276 95330305 5.0E-06 GAAAATATCCCCCATCCCAAACCTCCATAT 30 SPIB_ETS_DBD_monomeric_14_1 SELEX - 95325417 95325430 3.0E-06 TAAATGAGGAAGCT 14 ELF3_ETS_full_monomeric_13_1 SELEX - 95326294 95326306 4.0E-06 AACCAGGAAGTGC 13 RFX4_RFX_DBD_dimeric_15_1 SELEX + 95326638 95326652 3.0E-06 CGCTGCTGGGCAACG 15 EHF_ETS_full_monomeric_12_1 SELEX - 95326295 95326306 2.0E-06 AACCAGGAAGTG 12 Myf_MA0055.1 JASPAR + 95330144 95330155 5.0E-06 AAGCAACAGGAG 12 ELF5_ETS_full_monomeric_11_1 SELEX - 95326295 95326305 4.0E-06 ACCAGGAAGTG 11 ELF3_ETS_DBD_monomeric_12_1 SELEX - 95326295 95326306 1.0E-06 AACCAGGAAGTG 12 SPI1_ETS_full_monomeric_14_1 SELEX - 95325417 95325430 3.0E-06 TAAATGAGGAAGCT 14 REST_MA0138.2 JASPAR - 95326588 95326608 8.0E-06 GTCTCCACCGCGGCCAGCACC 21 RREB1_MA0073.1 JASPAR + 95330309 95330328 1.0E-06 ACCCAAACCACACGCTGAGA 20 V_SPI1_01_M01203 TRANSFAC - 95325414 95325430 5.0E-06 TAAATGAGGAAGCTGGA 17 V_GAF_Q6_M01209 TRANSFAC + 95330219 95330229 3.0E-06 CATATTCCCAG 11 V_GEN_INI_B_M00315 TRANSFAC + 95325422 95325429 1.0E-05 CCTCATTT 8 V_FLI1_Q6_M01208 TRANSFAC - 95326293 95326303 8.0E-06 CAGGAAGTGCC 11 V_SMAD3_Q6_01_M01888 TRANSFAC - 95330244 95330256 3.0E-06 GGGCAGACAGAAT 13 V_MEF2_02_M00231 TRANSFAC + 95330179 95330200 4.0E-06 CTCACATTTAAAATTAGCAAAG 22 V_NFAT3_Q3_M01734 TRANSFAC + 95330298 95330307 3.0E-06 ATATTTTCCT 10 V_P50P50_Q3_M01223 TRANSFAC - 95326474 95326486 8.0E-06 AGGGGACATTCCC 13 V_MAF_Q6_M00648 TRANSFAC - 95330384 95330399 4.0E-06 TAAGGGGCAGTTTCCT 16 V_PU1_Q4_M01172 TRANSFAC + 95325411 95325429 1.0E-06 ATCTCCAGCTTCCTCATTT 19 V_BRN2_01_M00145 TRANSFAC + 95330181 95330196 9.0E-06 CACATTTAAAATTAGC 16 V_GEN_INI3_B_M00314 TRANSFAC + 95325422 95325429 1.0E-05 CCTCATTT 8 V_MYF_01_M01302 TRANSFAC + 95330144 95330155 5.0E-06 AAGCAACAGGAG 12 V_BEL1_B_M00312 TRANSFAC - 95330325 95330352 1.0E-06 TATCTGCTTAGGCTTGGTTGATTCTCTC 28 V_NFKB_Q6_M00194 TRANSFAC - 95326473 95326486 7.0E-06 AGGGGACATTCCCG 14 V_SPIB_01_M01204 TRANSFAC - 95325414 95325430 3.0E-06 TAAATGAGGAAGCTGGA 17 V_RREB1_01_M00257 TRANSFAC + 95330309 95330322 2.0E-06 ACCCAAACCACACG 14 V_SRF_Q5_02_M01007 TRANSFAC - 95330268 95330286 7.0E-06 AACCTCCATATTTAGTCTC 19 V_SRF_03_M01304 TRANSFAC + 95330270 95330282 4.0E-06 GACTAAATATGGA 13 V_BLIMP1_Q6_M01066 TRANSFAC + 95327960 95327975 8.0E-06 GGAAGAGGGAATCTAG 16 V_GEN_INI2_B_M00313 TRANSFAC + 95325422 95325429 1.0E-05 CCTCATTT 8 V_NRSF_01_M00256 TRANSFAC - 95326588 95326608 6.0E-06 GTCTCCACCGCGGCCAGCACC 21 V_TCF4_Q5_M00671 TRANSFAC - 95326211 95326218 1.0E-05 CCTTTGAA 8 V_REST_02_M02256 TRANSFAC - 95326588 95326608 8.0E-06 GTCTCCACCGCGGCCAGCACC 21 V_RSRFC4_01_M00026 TRANSFAC - 95330183 95330198 5.0E-06 TTGCTAATTTTAAATG 16 V_EWSR1FLI1_01_M02252 TRANSFAC - 95326390 95326407 4.0E-06 GGAAAGAGGGAGGGAGGC 18 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 95330313 95330320 1.0E-05 TGTGGTTT 8 V_YY1_01_M00059 TRANSFAC - 95330270 95330286 7.0E-06 AACCTCCATATTTAGTC 17 V_HNF4_01_M00134 TRANSFAC + 95326214 95326232 4.0E-06 AAAGGGCCAGAGGGCACGA 19

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.