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AIRE Entrez Description Chrom. Strand Promoter (Start - Stop) TSS Motifs 326 autoimmune regulator chr21 + 45700720 - 45706220 45705720 V_AIRE_02_M01000 V_AIRE_01_M00999 Transcription Factor Binding Sites   Download all TFBS in the AIRE promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 45703927 45703944 3.0E-06 TATTTAAATATTTTTGCT 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 45703927 45703944 4.0E-06 AGCAAAAATATTTAAATA 18 POU2F1_POU_DBD_dimeric_14_1 SELEX - 45703929 45703942 3.0E-06 CAAAAATATTTAAA 14 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 45703927 45703935 9.0E-06 TATTTAAAT 9 POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 45703928 45703936 9.0E-06 TATTTAAAT 9 POU1F1_POU_DBD_monomeric_14_1 SELEX - 45703925 45703938 4.0E-06 AATATTTAAATAAC 14 Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX - 45705558 45705570 9.0E-06 TGCCTTGGGGGCT 13 POU2F2_POU_DBD_monomeric_11_1 SELEX - 45703927 45703937 1.0E-05 ATATTTAAATA 11 FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 45703929 45703942 4.0E-06 CAAAAATATTTAAA 14 POU3F3_POU_DBD_monomeric_13_1 SELEX - 45703926 45703938 4.0E-06 AATATTTAAATAA 13 FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 45703929 45703942 6.0E-06 CAAAAATATTTAAA 14 Pou2f2_POU_DBD_dimeric_14_1 SELEX - 45703929 45703942 1.0E-05 CAAAAATATTTAAA 14 POU2F3_POU_DBD_dimeric_12_1 SELEX - 45703930 45703941 3.0E-06 AAAAATATTTAA 12 FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 45703929 45703942 9.0E-06 CAAAAATATTTAAA 14 Lhx3_MA0135.1 JASPAR - 45703924 45703936 4.0E-06 TATTTAAATAACT 13 Lhx3_MA0135.1 JASPAR + 45703927 45703939 3.0E-06 TATTTAAATATTT 13 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX + 45705558 45705570 4.0E-06 AGCCCCCAAGGCA 13 POU3F1_POU_DBD_monomeric_12_1 SELEX + 45703926 45703937 8.0E-06 TTATTTAAATAT 12 POU3F1_POU_DBD_monomeric_12_1 SELEX - 45703926 45703937 7.0E-06 ATATTTAAATAA 12 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 45705510 45705524 6.0E-06 CGGAAGTGAGAGTTC 15 TFAP2B_TFAP_DBD_dimeric_13_1 SELEX + 45705558 45705570 5.0E-06 AGCCCCCAAGGCA 13 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 45703930 45703941 5.0E-06 AAAAATATTTAA 12 Pou5f1_MA0142.1 JASPAR - 45703063 45703077 6.0E-06 CATTGAGATGTTTAT 15 POU2F1_POU_DBD_monomeric_12_1 SELEX - 45703927 45703938 4.0E-06 AATATTTAAATA 12 FOXI1_forkhead_full_dimeric_17_1 SELEX - 45703936 45703952 3.0E-06 GTATTTACAGCAAAAAT 17 Rhox11_homeodomain_DBD_monomeric_9_1 SELEX + 45703941 45703949 4.0E-06 TGCTGTAAA 9 POU3F3_POU_DBD_dimeric_12_1 SELEX - 45703930 45703941 3.0E-06 AAAAATATTTAA 12 FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 45703927 45703937 6.0E-06 TATTTAAATAT 11 V_FOXP1_01_M00987 TRANSFAC + 45703926 45703945 4.0E-06 TTATTTAAATATTTTTGCTG 20 V_HNF3B_01_M00131 TRANSFAC + 45703930 45703944 8.0E-06 TTAAATATTTTTGCT 15 V_TST1_02_M01316 TRANSFAC - 45703923 45703939 6.0E-06 AAATATTTAAATAACTG 17 V_DBX1_01_M01483 TRANSFAC + 45703923 45703939 3.0E-06 CAGTTATTTAAATATTT 17 V_RHOX11_01_M01347 TRANSFAC + 45703937 45703953 4.0E-06 TTTTTGCTGTAAATACA 17 V_EVI1_04_M00081 TRANSFAC - 45703927 45703941 5.0E-06 AAAAATATTTAAATA 15 V_BCL6_01_M01183 TRANSFAC + 45703926 45703941 1.0E-06 TTATTTAAATATTTTT 16 V_POU5F1_02_M02245 TRANSFAC - 45703063 45703077 6.0E-06 CATTGAGATGTTTAT 15 V_MEIS1AHOXA9_01_M00420 TRANSFAC + 45705516 45705529 6.0E-06 TGAGAGTTCTCTGA 14 V_LHX3_01_M01471 TRANSFAC + 45703922 45703938 2.0E-06 GCAGTTATTTAAATATT 17 V_MEF2A_Q6_M02024 TRANSFAC + 45703927 45703936 8.0E-06 TATTTAAATA 10 V_MEF2A_Q6_M02024 TRANSFAC - 45703927 45703936 8.0E-06 TATTTAAATA 10 V_RHOX11_02_M01384 TRANSFAC + 45703937 45703953 5.0E-06 TTTTTGCTGTAAATACA 17 V_CRX_Q4_M00623 TRANSFAC + 45703257 45703269 2.0E-06 TTACTAATCCTCC 13 V_FREAC3_01_M00291 TRANSFAC + 45703940 45703955 3.0E-06 TTGCTGTAAATACAGA 16 V_LMX1_01_M01409 TRANSFAC + 45703922 45703938 5.0E-06 GCAGTTATTTAAATATT 17 V_ARID5A_03_M02736 TRANSFAC - 45703927 45703940 1.0E-06 AAAATATTTAAATA 14 V_TEF_Q6_M00672 TRANSFAC - 45703926 45703937 1.0E-06 ATATTTAAATAA 12 V_AP2BETA_Q3_M01858 TRANSFAC + 45703289 45703304 6.0E-06 GTGTCGGGCTGGGGGA 16 V_OBOX2_01_M01364 TRANSFAC - 45703256 45703272 5.0E-06 TGAGGAGGATTAGTAAA 17 V_OCT1_04_M00138 TRANSFAC + 45703920 45703942 5.0E-06 TTGCAGTTATTTAAATATTTTTG 23 V_OCT1_04_M00138 TRANSFAC - 45703921 45703943 1.0E-06 GCAAAAATATTTAAATAACTGCA 23 V_PIT1_01_M01465 TRANSFAC - 45703923 45703939 5.0E-06 AAATATTTAAATAACTG 17 V_PIT1_01_M01465 TRANSFAC + 45703924 45703940 6.0E-06 AGTTATTTAAATATTTT 17 V_NCX_02_M01420 TRANSFAC + 45703923 45703939 1.0E-06 CAGTTATTTAAATATTT 17 V_HB24_01_M01399 TRANSFAC + 45703924 45703938 9.0E-06 AGTTATTTAAATATT 15 V_HB24_01_M01399 TRANSFAC - 45703925 45703939 2.0E-06 AAATATTTAAATAAC 15 V_ARID3A_04_M02735 TRANSFAC + 45703922 45703938 7.0E-06 GCAGTTATTTAAATATT 17 V_TBP_06_M02814 TRANSFAC - 45703923 45703938 4.0E-06 AATATTTAAATAACTG 16 V_TBP_06_M02814 TRANSFAC + 45703925 45703940 2.0E-06 GTTATTTAAATATTTT 16 V_TBP_06_M02814 TRANSFAC - 45703927 45703942 9.0E-06 CAAAAATATTTAAATA 16 V_LIM1_01_M01418 TRANSFAC + 45703922 45703938 6.0E-06 GCAGTTATTTAAATATT 17 V_ZFP105_04_M02931 TRANSFAC + 45703926 45703942 2.0E-06 TTATTTAAATATTTTTG 17 V_OBOX2_02_M03064 TRANSFAC - 45703256 45703272 5.0E-06 TGAGGAGGATTAGTAAA 17 V_FOXL1_02_M02857 TRANSFAC - 45703922 45703937 1.0E-05 ATATTTAAATAACTGC 16 V_OCT1_Q6_M00195 TRANSFAC - 45703925 45703939 7.0E-06 AAATATTTAAATAAC 15 V_PITX1_01_M01484 TRANSFAC - 45703256 45703272 2.0E-06 TGAGGAGGATTAGTAAA 17 V_RHOX11_05_M03099 TRANSFAC + 45703937 45703953 5.0E-06 TTTTTGCTGTAAATACA 17 V_LMX1B_01_M01363 TRANSFAC - 45703922 45703938 6.0E-06 AATATTTAAATAACTGC 17 V_DOBOX5_01_M01463 TRANSFAC - 45703255 45703271 9.0E-06 GAGGAGGATTAGTAAAA 17 V_OCT1_06_M00162 TRANSFAC + 45703925 45703938 9.0E-06 GTTATTTAAATATT 14 V_PITX2_01_M01447 TRANSFAC - 45703255 45703271 7.0E-06 GAGGAGGATTAGTAAAA 17 V_MEF2A_05_M01301 TRANSFAC + 45703924 45703935 5.0E-06 AGTTATTTAAAT 12 V_LHX5_01_M01353 TRANSFAC + 45703922 45703938 3.0E-06 GCAGTTATTTAAATATT 17 V_HOXD10_01_M01375 TRANSFAC + 45703923 45703939 5.0E-06 CAGTTATTTAAATATTT 17 V_OBOX3_02_M03065 TRANSFAC - 45703256 45703272 5.0E-06 TGAGGAGGATTAGTAAA 17 V_RHOX11_06_M03100 TRANSFAC + 45703937 45703953 4.0E-06 TTTTTGCTGTAAATACA 17 V_OBOX3_01_M01466 TRANSFAC - 45703256 45703272 5.0E-06 TGAGGAGGATTAGTAAA 17 V_OCT4_01_M01125 TRANSFAC - 45703063 45703077 9.0E-06 CATTGAGATGTTTAT 15 V_OTX3_01_M01403 TRANSFAC - 45703256 45703272 4.0E-06 TGAGGAGGATTAGTAAA 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.