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APC Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 324 adenomatous polyposis coli chr5 + 112038201 - 112043701 112043201 Transcription Factor Binding Sites   Download all TFBS in the APC promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 112043213 112043231 9.0E-06 CTCCCACAAGATGGCGGAG 19 RARB_nuclearreceptor_full_dimeric_16_1 SELEX + 112044436 112044451 8.0E-06 TAAGTTCAAAACTTCT 16 NFIA_NFI_full_dimeric_15_1 SELEX + 112039766 112039780 3.0E-06 TTGGCACTTTGCCCA 15 NFIA_NFI_full_dimeric_15_1 SELEX - 112039766 112039780 2.0E-06 TGGGCAAAGTGCCAA 15 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 112040110 112040126 3.0E-06 AAATTAATACACCATTT 17 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 112042539 112042555 9.0E-06 ATAAAAGACAGTCAACA 17 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 112042546 112042562 4.0E-06 ATAGACAATAAAAGACA 17 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 112040181 112040192 1.0E-05 TGAGTCAATAAA 12 SOX8_HMG_DBD_dimeric_16_1 SELEX - 112039927 112039942 6.0E-06 AAAGATCTGCAGTGGT 16 SOX9_HMG_full_dimeric_17_3 SELEX - 112042540 112042556 6.0E-06 AATAAAAGACAGTCAAC 17 NFIX_NFI_full_dimeric_15_2 SELEX + 112039766 112039780 2.0E-06 TTGGCACTTTGCCCA 15 NFIX_NFI_full_dimeric_15_2 SELEX - 112039766 112039780 1.0E-06 TGGGCAAAGTGCCAA 15 SOX7_HMG_full_dimeric_17_2 SELEX - 112042540 112042556 6.0E-06 AATAAAAGACAGTCAAC 17 IRF1_MA0050.1 JASPAR + 112047255 112047266 5.0E-06 AAAAATGAAAGA 12 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 112042550 112042559 4.0E-06 GACAATAAAA 10 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX - 112042550 112042558 7.0E-06 ACAATAAAA 9 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 112042539 112042552 5.0E-06 AAAGACAGTCAACA 14 SP1_MA0079.2 JASPAR - 112043244 112043253 7.0E-06 CCCCGCCCCC 10 SP4_C2H2_full_monomeric_17_1 SELEX - 112043241 112043257 5.0E-06 CACACCCCGCCCCCTTG 17 SP1_C2H2_DBD_monomeric_11_1 SELEX - 112043244 112043254 4.0E-06 ACCCCGCCCCC 11 YY2_C2H2_full_monomeric_11_1 SELEX - 112043220 112043230 2.0E-06 TCCGCCATCTT 11 TEAD3_TEA_DBD_dimeric_17_1 SELEX + 112045331 112045347 5.0E-06 TCATGCCTGTAATTCCA 17 HESX1_homeodomain_DBD_dimeric_15_1 SELEX + 112039863 112039877 5.0E-06 ATAATTGTTTCTTAG 15 LHX9_homeodomain_DBD_dimeric_13_1 SELEX + 112039864 112039876 7.0E-06 TAATTGTTTCTTA 13 LHX9_homeodomain_DBD_dimeric_13_1 SELEX - 112039864 112039876 3.0E-06 TAAGAAACAATTA 13 Evi1_MA0029.1 JASPAR - 112039785 112039798 0.0E+00 ATGATAAGATAAAT 14 NFIB_NFI_full_dimeric_15_1 SELEX + 112039766 112039780 2.0E-06 TTGGCACTTTGCCCA 15 NFIB_NFI_full_dimeric_15_1 SELEX - 112039766 112039780 2.0E-06 TGGGCAAAGTGCCAA 15 Pou5f1_MA0142.1 JASPAR - 112047251 112047265 8.0E-06 CTTTCATTTTTAAAT 15 PPARG_MA0066.1 JASPAR + 112047271 112047290 9.0E-06 CTGGGCCATGGTGTCTCACA 20 NRF1_NRF_full_dimeric_12_1 SELEX + 112043129 112043140 5.0E-06 TGCGCCTGCGCA 12 NRF1_NRF_full_dimeric_12_1 SELEX - 112043129 112043140 5.0E-06 TGCGCAGGCGCA 12 NRF1_NRF_full_dimeric_12_1 SELEX + 112043186 112043197 1.0E-06 CACGCATGCGCA 12 NRF1_NRF_full_dimeric_12_1 SELEX - 112043186 112043197 2.0E-06 TGCGCATGCGTG 12 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 112040110 112040127 1.0E-05 GAAATTAATACACCATTT 18 Sox2_MA0143.1 JASPAR - 112042962 112042976 1.0E-05 CCATTATTCCGCAAA 15 Hic1_C2H2_DBD_dimeric_18_1 SELEX - 112040299 112040316 8.0E-06 ATGCCAAAGACTGCCAAC 18 CDX2_homeodomain_DBD_monomeric_9_1 SELEX - 112042550 112042558 6.0E-06 ACAATAAAA 9 NFIA_NFI_full_monomeric_10_1 SELEX - 112039764 112039773 2.0E-06 AGTGCCAAGT 10 TBX1_TBX_DBD_dimeric_20_1 SELEX - 112047286 112047305 9.0E-06 TGCTGGGATTACAGGTGTGA 20 CDX1_homeodomain_DBD_monomeric_9_1 SELEX - 112042550 112042558 6.0E-06 ACAATAAAA 9 V_MSX3_01_M01341 TRANSFAC - 112039860 112039875 6.0E-06 AAGAAACAATTATGTA 16 V_FREAC7_01_M00293 TRANSFAC - 112039780 112039795 6.0E-06 ATAAGATAAATAGTAT 16 V_TCF3_01_M01594 TRANSFAC - 112047254 112047266 1.0E-06 TCTTTCATTTTTA 13 V_AML_Q6_M00769 TRANSFAC - 112045282 112045296 6.0E-06 GAGTTTGTGGTCAGA 15 V_CDX2_Q5_01_M01659 TRANSFAC - 112040178 112040188 7.0E-06 TCAATAAATGT 11 V_EVI1_05_M00082 TRANSFAC - 112039787 112039797 0.0E+00 TGATAAGATAA 11 V_OSF2_Q6_M00731 TRANSFAC + 112045286 112045293 1.0E-05 ACCACAAA 8 V_ZFP410_04_M02936 TRANSFAC + 112043705 112043721 3.0E-06 TCTCCCCTCCCCGCACT 17 V_YY1_02_M00069 TRANSFAC - 112043213 112043232 9.0E-06 CCTCCGCCATCTTGTGGGAG 20 V_NRSF_Q4_M01028 TRANSFAC - 112043488 112043506 2.0E-06 CTGCTGCCGCCGGTGCTCC 19 V_STAT3STAT3_Q3_M01220 TRANSFAC - 112043097 112043110 9.0E-06 TTGCCGGGCACTGC 14 V_SOX30_03_M02804 TRANSFAC - 112039860 112039875 9.0E-06 AAGAAACAATTATGTA 16 V_NF1A_Q6_M02103 TRANSFAC - 112039765 112039780 9.0E-06 TGGGCAAAGTGCCAAG 16 V_BCL6_01_M01183 TRANSFAC + 112042552 112042567 7.0E-06 TTATTGTCTATTCTTT 16 V_POU5F1_02_M02245 TRANSFAC - 112047251 112047265 8.0E-06 CTTTCATTTTTAAAT 15 V_IK_Q5_M01169 TRANSFAC + 112045352 112045361 6.0E-06 TTTGGGAGAG 10 V_SP1_Q6_01_M00931 TRANSFAC + 112043245 112043254 7.0E-06 GGGGCGGGGT 10 V_IRF_Q6_01_M00972 TRANSFAC + 112047255 112047265 1.0E-06 AAAAATGAAAG 11 V_MEIS1AHOXA9_01_M00420 TRANSFAC - 112040126 112040139 4.0E-06 TAACAGCTCTATGA 14 V_MEIS1AHOXA9_01_M00420 TRANSFAC - 112045297 112045310 6.0E-06 TGAGAGGTTTTAAA 14 V_IRF2_Q6_M01882 TRANSFAC + 112047253 112047268 0.0E+00 TTAAAAATGAAAGATA 16 V_CEBP_C_M00201 TRANSFAC + 112040192 112040209 6.0E-06 AGAGTTCTGAAAGTTATA 18 V_HNF4_Q6_M00967 TRANSFAC + 112040261 112040269 7.0E-06 AAAGTCCAT 9 V_EVI1_02_M00079 TRANSFAC - 112039787 112039797 0.0E+00 TGATAAGATAA 11 V_SOX11_04_M02899 TRANSFAC + 112039863 112039876 3.0E-06 ATAATTGTTTCTTA 14 V_YY1_Q6_M00793 TRANSFAC - 112043219 112043227 7.0E-06 GCCATCTTG 9 V_HNF3_Q6_01_M01012 TRANSFAC + 112039779 112039796 5.0E-06 CATACTATTTATCTTATC 18 V_FOXJ1_03_M02750 TRANSFAC - 112042533 112042548 2.0E-06 ACAGTCAACAAAAGAA 16 V_SP1_03_M02281 TRANSFAC - 112043244 112043253 7.0E-06 CCCCGCCCCC 10 V_GKLF_02_M01588 TRANSFAC - 112043248 112043259 7.0E-06 GCCACACCCCGC 12 V_GKLF_02_M01588 TRANSFAC - 112045316 112045327 4.0E-06 ACCACACCCTGC 12 V_DLX2_01_M01468 TRANSFAC - 112039858 112039873 1.0E-05 GAAACAATTATGTAAA 16 V_PITX2_Q6_M02114 TRANSFAC + 112047293 112047302 1.0E-06 TGTAATCCCA 10 V_SP1_02_M01303 TRANSFAC + 112043245 112043255 3.0E-06 GGGGCGGGGTG 11 V_PU1_Q4_M01172 TRANSFAC + 112040074 112040092 1.0E-06 AACATCTCTTTCCTCTATT 19 V_LYF1_01_M00141 TRANSFAC + 112045352 112045360 3.0E-06 TTTGGGAGA 9 V_LDSPOLYA_B_M00317 TRANSFAC + 112042542 112042557 4.0E-06 TGACTGTCTTTTATTG 16 V_NKX62_Q2_M00489 TRANSFAC - 112039782 112039793 7.0E-06 AAGATAAATAGT 12 V_TGIF2_01_M01407 TRANSFAC + 112039875 112039890 9.0E-06 TAGTATCTGTCAGACC 16 V_RPC155_01_M01798 TRANSFAC + 112045387 112045402 0.0E+00 CCAGGAGTTCGAGACC 16 V_HNF6_Q6_M00639 TRANSFAC - 112040182 112040193 8.0E-06 CTGAGTCAATAA 12 V_SOX13_03_M02797 TRANSFAC - 112039861 112039876 2.0E-06 TAAGAAACAATTATGT 16 V_GC_01_M00255 TRANSFAC + 112043243 112043256 3.0E-06 AGGGGGCGGGGTGT 14 V_SOX7_03_M02807 TRANSFAC - 112039857 112039878 3.0E-06 ACTAAGAAACAATTATGTAAAG 22 V_IPF1_Q4_M00436 TRANSFAC - 112039960 112039971 3.0E-06 GAGATAATGACA 12 V_DBP_Q6_01_M01872 TRANSFAC - 112039859 112039866 5.0E-06 TTATGTAA 8 V_TGIF_02_M01346 TRANSFAC - 112039953 112039969 6.0E-06 GATAATGACAGCCACCC 17 V_HNF4_01_B_M00411 TRANSFAC + 112045359 112045373 1.0E-05 GAGGCCAAAGCGCAT 15 V_POLY_C_M00212 TRANSFAC + 112045296 112045313 5.0E-06 CTTTAAAACCTCTCACTT 18 V_XFD3_01_M00269 TRANSFAC - 112040179 112040192 3.0E-06 TGAGTCAATAAATG 14 V_XFD3_01_M00269 TRANSFAC - 112042535 112042548 2.0E-06 ACAGTCAACAAAAG 14 V_SP4_03_M02810 TRANSFAC - 112043239 112043255 2.0E-06 CACCCCGCCCCCTTGCT 17 Hand1_Tcfe2a_MA0092.1 JASPAR + 112040359 112040368 8.0E-06 CATCTGGCAT 10 V_SP1_Q6_M00196 TRANSFAC + 112043243 112043255 1.0E-06 AGGGGGCGGGGTG 13 V_EVI1_01_M00078 TRANSFAC - 112039805 112039820 4.0E-06 TGAGAAAACTAGACAC 16 V_MAZ_Q6_01_M02023 TRANSFAC - 112039694 112039707 3.0E-06 TGGGGTGGAGAGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 112043704 112043717 8.0E-06 CGGGGAGGGGAGAG 14 V_HNF3_Q6_M00791 TRANSFAC - 112039970 112039982 4.0E-06 CTGTACAAACAGA 13 V_IRF_Q6_M00772 TRANSFAC - 112047255 112047269 1.0E-06 TTATCTTTCATTTTT 15 V_HMX1_01_M00433 TRANSFAC - 112039759 112039768 1.0E-06 CAAGTGCGTG 10 V_HNF1_Q6_01_M01011 TRANSFAC - 112039865 112039885 8.0E-06 GACAGATACTAAGAAACAATT 21 V_NKX52_01_M01315 TRANSFAC - 112039858 112039874 1.0E-05 AGAAACAATTATGTAAA 17 V_NKX52_01_M01315 TRANSFAC - 112044447 112044463 0.0E+00 ACAAGCAATTTAAGAAG 17 V_NFE4_Q5_M02105 TRANSFAC + 112039692 112039703 3.0E-06 CTCCCTCTCCAC 12 V_YY1_Q6_02_M01035 TRANSFAC - 112043220 112043230 7.0E-06 TCCGCCATCTT 11 V_OCT1_04_M00138 TRANSFAC - 112039850 112039872 7.0E-06 AAACAATTATGTAAAGACAGGGT 23 V_REX1_03_M01744 TRANSFAC + 112043220 112043231 6.0E-06 AAGATGGCGGAG 12 V_HBP1_03_M02762 TRANSFAC - 112044148 112044163 5.0E-06 AAAATGAATGATTTAG 16 V_HMX1_02_M01481 TRANSFAC - 112044447 112044463 1.0E-06 ACAAGCAATTTAAGAAG 17 V_SP1_01_M00008 TRANSFAC + 112043245 112043254 3.0E-06 GGGGCGGGGT 10 V_TGIF1_01_M03111 TRANSFAC - 112039953 112039969 6.0E-06 GATAATGACAGCCACCC 17 V_CTCF_02_M01259 TRANSFAC + 112043210 112043229 1.0E-06 CACCTCCCACAAGATGGCGG 20 V_CTCF_01_M01200 TRANSFAC + 112043212 112043231 9.0E-06 CCTCCCACAAGATGGCGGAG 20 V_AP1_Q2_01_M00924 TRANSFAC + 112040186 112040197 2.0E-06 TGACTCAGAGTT 12 V_BCL6B_04_M02844 TRANSFAC - 112047334 112047349 6.0E-06 AACTCCGCCCCTCAAG 16 V_VBP_01_M00228 TRANSFAC + 112039858 112039867 9.0E-06 TTTACATAAT 10 V_ZFP105_04_M02931 TRANSFAC - 112040177 112040193 3.0E-06 CTGAGTCAATAAATGTC 17 V_YY1_03_M02044 TRANSFAC - 112043219 112043230 2.0E-06 TCCGCCATCTTG 12 V_SOX15_03_M02799 TRANSFAC - 112039860 112039876 8.0E-06 TAAGAAACAATTATGTA 17 V_MTF1_06_M02882 TRANSFAC + 112047255 112047268 9.0E-06 AAAAATGAAAGATA 14 V_TAL1_01_M01591 TRANSFAC - 112039979 112039991 4.0E-06 TTTCCTCATCTGT 13 V_TAL1_01_M01591 TRANSFAC + 112043681 112043693 6.0E-06 CTCTCTTCTCTCC 13 V_EOMES_04_M02851 TRANSFAC - 112043172 112043187 3.0E-06 TGAGAGGTGTTGCTGG 16 V_GATA1_04_M00128 TRANSFAC - 112039783 112039795 6.0E-06 ATAAGATAAATAG 13 V_BARHL1_01_M01332 TRANSFAC - 112039860 112039875 3.0E-06 AAGAAACAATTATGTA 16 V_CAAT_C_M00200 TRANSFAC + 112039752 112039776 1.0E-06 TCCAAACCACGCACTTGGCACTTTG 25 V_GATA3_02_M00350 TRANSFAC - 112039963 112039972 1.0E-05 AGAGATAATG 10 V_PITX1_01_M01484 TRANSFAC + 112047243 112047259 6.0E-06 CAAATGGGATTTAAAAA 17 V_PXR_Q2_M00964 TRANSFAC - 112040181 112040192 9.0E-06 TGAGTCAATAAA 12 V_GATA6_01_M00462 TRANSFAC + 112047262 112047271 2.0E-06 AAAGATAAGC 10 V_ZFP206_01_M01742 TRANSFAC + 112043129 112043139 8.0E-06 TGCGCCTGCGC 11 V_ZFP206_01_M01742 TRANSFAC - 112043130 112043140 1.0E-06 TGCGCAGGCGC 11 V_ZFP206_01_M01742 TRANSFAC - 112043187 112043197 2.0E-06 TGCGCATGCGT 11 V_BDP1_01_M01796 TRANSFAC - 112045391 112045402 2.0E-06 GGTCTCGAACTC 12 V_NRF1_Q6_M00652 TRANSFAC + 112043188 112043197 2.0E-06 CGCATGCGCA 10 V_PITX2_Q2_M00482 TRANSFAC + 112047293 112047303 1.0E-06 TGTAATCCCAG 11 V_FOX_Q2_M00809 TRANSFAC + 112039781 112039793 9.0E-06 TACTATTTATCTT 13 V_PLZF_02_M01075 TRANSFAC + 112044137 112044165 6.0E-06 TGATTGTTCATCTAAATCATTCATTTTTT 29 V_T3RBETA_Q6_01_M02119 TRANSFAC - 112040352 112040368 6.0E-06 ATGCCAGATGAGGACAA 17 V_IRF1_Q6_01_M01881 TRANSFAC - 112047254 112047267 3.0E-06 ATCTTTCATTTTTA 14 V_SOX8_03_M02808 TRANSFAC + 112039860 112039876 4.0E-06 TACATAATTGTTTCTTA 17 V_PBX_Q3_M00998 TRANSFAC + 112042954 112042965 1.0E-05 GATAGATGTTTG 12 V_SOX2_01_M02246 TRANSFAC - 112042962 112042976 1.0E-05 CCATTATTCCGCAAA 15 V_EKLF_Q5_M01874 TRANSFAC - 112045317 112045326 2.0E-06 CCACACCCTG 10 V_IRF1_01_M00062 TRANSFAC + 112047254 112047266 4.0E-06 TAAAAATGAAAGA 13 V_BARHL2_01_M01446 TRANSFAC - 112039860 112039875 1.0E-06 AAGAAACAATTATGTA 16 V_PIT1_Q6_M00802 TRANSFAC - 112047248 112047265 5.0E-06 CTTTCATTTTTAAATCCC 18 V_SP1_Q2_01_M00933 TRANSFAC - 112043244 112043253 4.0E-06 CCCCGCCCCC 10 V_HOXA10_01_M01464 TRANSFAC - 112042546 112042561 3.0E-06 TAGACAATAAAAGACA 16 V_HMX3_02_M01413 TRANSFAC - 112039858 112039874 6.0E-06 AGAAACAATTATGTAAA 17 V_HMX3_02_M01413 TRANSFAC - 112044447 112044463 0.0E+00 ACAAGCAATTTAAGAAG 17 V_SOX5_07_M02909 TRANSFAC + 112039860 112039876 8.0E-06 TACATAATTGTTTCTTA 17 V_SP1_Q4_01_M00932 TRANSFAC + 112043243 112043255 1.0E-06 AGGGGGCGGGGTG 13 V_PBX1_04_M01357 TRANSFAC - 112044034 112044050 5.0E-06 TCTCCCATCAAAGTGAA 17 V_EVI1_03_M00080 TRANSFAC - 112039787 112039797 0.0E+00 TGATAAGATAA 11 V_NANOG_02_M01247 TRANSFAC + 112047252 112047271 6.0E-06 TTTAAAAATGAAAGATAAGC 20 V_OCT4_01_M01125 TRANSFAC - 112047251 112047265 7.0E-06 CTTTCATTTTTAAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.