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HOXC13


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSSMotifs
3229 homeobox C13 chr12 +54327575 - 54333075 54332575 HOXC13_homeodomain_DBD_monomeric_10_1
HOXC13_homeodomain_DBD_monomeric_11_1
V_HOXC13_01_M01317

Transcription Factor Binding Sites

 
Download all TFBS in the HOXC13 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 54329134 54329145 4.0E-06 TATGCAAATAAA 12
POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 54329137 54329145 2.0E-06 TATGCAAAT 9
POU2F3_POU_DBD_monomeric_9_1 SELEX - 54329137 54329145 2.0E-06 TATGCAAAT 9
POU1F1_POU_DBD_monomeric_14_1 SELEX - 54329134 54329147 3.0E-06 TGTATGCAAATAAA 14
POU2F2_POU_DBD_monomeric_11_1 SELEX - 54329136 54329146 2.0E-06 GTATGCAAATA 11
POU3F4_POU_DBD_monomeric_9_1 SELEX - 54329137 54329145 2.0E-06 TATGCAAAT 9
Pou2f2_POU_DBD_monomeric_9_1 SELEX - 54329137 54329145 2.0E-06 TATGCAAAT 9
POU3F3_POU_DBD_monomeric_13_1 SELEX - 54329135 54329147 2.0E-06 TGTATGCAAATAA 13
SP1_MA0079.2 JASPAR - 54332566 54332575 9.0E-06 CCCCTCCTCC 10
SP1_MA0079.2 JASPAR - 54332605 54332614 3.0E-06 CCCCTCCCCC 10
POU3F1_POU_DBD_monomeric_12_1 SELEX - 54329135 54329146 2.0E-06 GTATGCAAATAA 12
POU2F1_POU_DBD_monomeric_12_1 SELEX - 54329136 54329147 3.0E-06 TGTATGCAAATA 12
NRF1_NRF_full_dimeric_12_1 SELEX - 54329264 54329275 7.0E-06 TGCGCGTGCGCT 12
POU3F2_POU_DBD_monomeric_12_1 SELEX - 54329135 54329146 2.0E-06 GTATGCAAATAA 12
TEAD1_MA0090.1 JASPAR - 54333574 54333585 4.0E-06 CGCATTCCTCAG 12
V_KLF15_Q2_M01714 TRANSFAC - 54332387 54332400 6.0E-06 GAGGTGGGGCGGGG 14
V_KLF15_Q2_M01714 TRANSFAC + 54332567 54332580 4.0E-06 GAGGAGGGGAGGGG 14
V_ZFP410_04_M02936 TRANSFAC - 54332589 54332605 4.0E-06 CCATCCCTCCCCTCTTT 17
V_FOXA2_04_M02749 TRANSFAC - 54329131 54329147 7.0E-06 TGTATGCAAATAAAGGT 17
V_EBOX_Q6_01_M01034 TRANSFAC - 54332452 54332461 2.0E-06 CCACGTGACC 10
V_SP1_Q6_01_M00931 TRANSFAC - 54332386 54332395 4.0E-06 GGGGCGGGGC 10
V_OCT1_Q5_01_M00930 TRANSFAC + 54329135 54329145 0.0E+00 TTATTTGCATA 11
V_OCT1_01_M00135 TRANSFAC - 54329132 54329150 1.0E-06 CTCTGTATGCAAATAAAGG 19
V_POU2F3_01_M01476 TRANSFAC - 54329133 54329148 0.0E+00 CTGTATGCAAATAAAG 16
V_SP1_03_M02281 TRANSFAC - 54332566 54332575 9.0E-06 CCCCTCCTCC 10
V_SP1_03_M02281 TRANSFAC - 54332605 54332614 3.0E-06 CCCCTCCCCC 10
V_OCT_C_M00210 TRANSFAC + 54329134 54329146 0.0E+00 TTTATTTGCATAC 13
V_CEBPD_Q6_M00621 TRANSFAC - 54333635 54333646 5.0E-06 GATTGCTTCATT 12
V_IRF3_Q3_M01279 TRANSFAC + 54332372 54332384 6.0E-06 ACTTTTTCCCTTT 13
V_MAZ_Q6_01_M02023 TRANSFAC - 54332265 54332278 1.0E-06 GAGGGAGGGGGGGG 14
V_MAZ_Q6_01_M02023 TRANSFAC + 54332566 54332579 0.0E+00 GGAGGAGGGGAGGG 14
V_MAZ_Q6_01_M02023 TRANSFAC + 54332571 54332584 6.0E-06 AGGGGAGGGGTGGA 14
V_MAZ_Q6_01_M02023 TRANSFAC + 54332593 54332606 8.0E-06 AGGGGAGGGATGGG 14
V_SP1SP3_Q4_M01219 TRANSFAC + 54332265 54332275 2.0E-06 CCCCCCCCTCC 11
V_TEF_01_M01305 TRANSFAC - 54333574 54333585 4.0E-06 CGCATTCCTCAG 12
V_MZF1_02_M00084 TRANSFAC + 54332605 54332617 3.0E-06 GGGGGAGGGGAAA 13
V_OCT1_B_M00342 TRANSFAC - 54329136 54329145 0.0E+00 TATGCAAATA 10
V_OCT_Q6_M00795 TRANSFAC + 54329135 54329145 0.0E+00 TTATTTGCATA 11
V_TFIII_Q6_M00706 TRANSFAC - 54332271 54332279 6.0E-06 AGAGGGAGG 9
V_USF_Q6_01_M00796 TRANSFAC - 54332452 54332463 5.0E-06 GCCCACGTGACC 12
V_MAZR_01_M00491 TRANSFAC + 54332605 54332617 1.0E-05 GGGGGAGGGGAAA 13
V_POU5F1_01_M01307 TRANSFAC - 54329136 54329145 2.0E-06 TATGCAAATA 10
V_OCT2_01_M01368 TRANSFAC - 54329133 54329148 0.0E+00 CTGTATGCAAATAAAG 16
V_OCT1_Q6_M00195 TRANSFAC - 54329134 54329148 2.0E-06 CTGTATGCAAATAAA 15
V_CPHX_01_M01478 TRANSFAC + 54333636 54333649 9.0E-06 ATGAAGCAATCACA 14
V_ZFP206_01_M01742 TRANSFAC - 54329265 54329275 7.0E-06 TGCGCGTGCGC 11
V_TCF4_Q5_M00671 TRANSFAC + 54329442 54329449 1.0E-05 CCTTTGAA 8
V_ZFP281_01_M01597 TRANSFAC + 54332604 54332614 2.0E-06 GGGGGGAGGGG 11
V_ZFP281_04_M02831 TRANSFAC - 54332601 54332615 1.0E-06 TCCCCTCCCCCCATC 15
V_MEF2_01_M00006 TRANSFAC + 54335676 54335691 7.0E-06 ATTTCAAGATAACTCT 16
V_HMEF2_Q6_M00406 TRANSFAC + 54335676 54335691 1.0E-05 ATTTCAAGATAACTCT 16
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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