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HOXC12


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSSMotifs
3228 homeobox C12 chr12 +54343713 - 54349213 54348713 HOXC12_homeodomain_DBD_monomeric_9_1
HOXC12_homeodomain_DBD_monomeric_11_1
V_HOXC12_01_M01437

Transcription Factor Binding Sites

 
Download all TFBS in the HOXC12 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
EWSR1-FLI1_MA0149.1 JASPAR + 54350882 54350899 4.0E-06 GGAAGTGGGGAACCAAGG 18
TEAD3_TEA_DBD_dimeric_17_1 SELEX - 54347067 54347083 1.0E-06 AGATTCTTTGAATTCCA 17
VENTX_homeodomain_DBD_dimeric_21_1 SELEX + 54350909 54350929 6.0E-06 GGTTTGTGAGAAAATGATTAG 21
TEAD1_TEA_full_dimeric_17_1 SELEX - 54347067 54347083 1.0E-06 AGATTCTTTGAATTCCA 17
V_HOXA13_02_M01297 TRANSFAC - 54350628 54350636 3.0E-06 AAATAAACC 9
V_MAF_Q6_M00648 TRANSFAC + 54350896 54350911 0.0E+00 AAGGAGGAAGTGTGGT 16
V_PU1_Q4_M01172 TRANSFAC - 54346640 54346658 1.0E-06 ACATCTTATTTCCCCTTCT 19
V_HNF1_C_M00206 TRANSFAC - 54350915 54350931 2.0E-06 TGCTAATCATTTTCTCA 17
V_PR_01_M00954 TRANSFAC - 54350414 54350440 7.0E-06 TCTAAGTGGGGACTGTGTTCTAGGCGG 27
V_PAX6_Q2_M00979 TRANSFAC + 54346669 54346682 3.0E-06 GTGACCTGGAATTT 14
V_GR_01_M00955 TRANSFAC - 54350414 54350440 2.0E-06 TCTAAGTGGGGACTGTGTTCTAGGCGG 27
V_RREB1_01_M00257 TRANSFAC + 54350514 54350527 2.0E-06 ACCCAAAACACCCT 14
V_ELF1_Q6_M00746 TRANSFAC + 54346640 54346651 7.0E-06 AGAAGGGGAAAT 12
V_TAL1_01_M01591 TRANSFAC - 54350538 54350550 4.0E-06 TTCCCTTCTCTCT 13
V_SOX14_04_M02901 TRANSFAC - 54350506 54350522 6.0E-06 GTTTTGGGTGTGTATGG 17
V_EWSR1FLI1_01_M02252 TRANSFAC + 54350882 54350899 4.0E-06 GGAAGTGGGGAACCAAGG 18
V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC + 54350906 54350913 1.0E-05 TGTGGTTT 8
V_SPI1_02_M02043 TRANSFAC + 54346643 54346652 8.0E-06 AGGGGAAATA 10
V_SPI1_02_M02043 TRANSFAC - 54350707 54350716 6.0E-06 AAGGGAAGTA 10
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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