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HOXB1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 3211 homeobox B1 chr17 - 46607772 - 46613272 46608272 Transcription Factor Binding Sites   Download all TFBS in the HOXB1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SP8_C2H2_DBD_monomeric_12_1 SELEX - 46604920 46604931 7.0E-06 AACACCCCCACT 12 MYF6_bHLH_full_dimeric_10_1 SELEX + 46605097 46605106 8.0E-06 AACAGATGTT 10 MYF6_bHLH_full_dimeric_10_1 SELEX - 46605097 46605106 7.0E-06 AACATCTGTT 10 SPIC_ETS_full_monomeric_14_1 SELEX - 46605059 46605072 2.0E-06 AAAAAGAGGAGGAA 14 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX + 46605682 46605693 2.0E-06 TGACAACTGTCA 12 PKNOX1_MEIS_DBD_dimeric_12_1 SELEX - 46605682 46605693 1.0E-06 TGACAGTTGTCA 12 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 46604594 46604604 6.0E-06 TAAAAAGGTCA 11 EWSR1-FLI1_MA0149.1 JASPAR - 46604761 46604778 5.0E-06 GGACGGCAGGAAGGAGGT 18 EWSR1-FLI1_MA0149.1 JASPAR + 46604999 46605016 2.0E-06 GGGAGGGAGGCAGGTGAG 18 EWSR1-FLI1_MA0149.1 JASPAR - 46605109 46605126 9.0E-06 GGAAGACGGGAAAGAAGA 18 POU1F1_POU_DBD_monomeric_14_1 SELEX + 46605905 46605918 5.0E-06 TTTATTGAAATGAG 14 Pknox2_MEIS_DBD_dimeric_12_1 SELEX + 46605682 46605693 2.0E-06 TGACAACTGTCA 12 Pknox2_MEIS_DBD_dimeric_12_1 SELEX - 46605682 46605693 1.0E-06 TGACAGTTGTCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX + 46605682 46605693 1.0E-06 TGACAACTGTCA 12 TGIF2_MEIS_DBD_dimeric_12_1 SELEX - 46605682 46605693 1.0E-06 TGACAGTTGTCA 12 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX + 46604590 46604607 1.0E-06 GAGGTAAAAAGGTCAGCC 18 ZNF238_C2H2_full_monomeric_13_1 SELEX + 46605095 46605107 4.0E-06 CAAACAGATGTTT 13 NR2F1_MA0017.1 JASPAR - 46605027 46605040 4.0E-06 TGAACTCTACCCCT 14 Meis3_MEIS_DBD_dimeric_12_1 SELEX + 46605682 46605693 0.0E+00 TGACAACTGTCA 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 46605682 46605693 1.0E-06 TGACAGTTGTCA 12 SP1_MA0079.2 JASPAR + 46604713 46604722 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR - 46610633 46610642 3.0E-06 CCCCTCCCCC 10 Tcf21_bHLH_DBD_dimeric_14_1 SELEX - 46605095 46605108 9.0E-06 GAAACATCTGTTTG 14 HNF4A_nuclearreceptor_full_dimeric_15_1 SELEX + 46604591 46604605 3.0E-06 AGGTAAAAAGGTCAG 15 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX + 46604590 46604605 0.0E+00 GAGGTAAAAAGGTCAG 16 MZF1_5-13_MA0057.1 JASPAR + 46605013 46605022 8.0E-06 TGAGGGGGAA 10 TBX2_TBX_full_monomeric_11_1 SELEX - 46605070 46605080 7.0E-06 AGGGTGTTAAA 11 TGIF2LX_MEIS_full_dimeric_12_1 SELEX + 46605682 46605693 7.0E-06 TGACAACTGTCA 12 TGIF2LX_MEIS_full_dimeric_12_1 SELEX - 46605682 46605693 0.0E+00 TGACAGTTGTCA 12 Meis2_MEIS_DBD_dimeric_12_1 SELEX + 46605682 46605693 2.0E-06 TGACAACTGTCA 12 Meis2_MEIS_DBD_dimeric_12_1 SELEX - 46605682 46605693 1.0E-06 TGACAGTTGTCA 12 MEIS2_MEIS_DBD_dimeric_14_1 SELEX - 46605681 46605694 2.0E-06 TTGACAGTTGTCAG 14 FOXO6_forkhead_DBD_putatively-multimeric_14_1 SELEX + 46605048 46605061 6.0E-06 TTCCCCCACACTTC 14 REST_MA0138.2 JASPAR + 46605175 46605195 5.0E-06 CCCAGCACTTTGGAAAGCGGA 21 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX + 46604590 46604604 0.0E+00 GAGGTAAAAAGGTCA 15 PLAG1_MA0163.1 JASPAR - 46604738 46604751 4.0E-06 GGGGCCTAGTGGGG 14 FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX + 46605048 46605059 4.0E-06 TTCCCCCACACT 12 RORA_1_MA0071.1 JASPAR + 46604595 46604604 4.0E-06 AAAAAGGTCA 10 Sox2_MA0143.1 JASPAR - 46608510 46608524 0.0E+00 TCTTTGTCATGCTAA 15 Hic1_C2H2_DBD_dimeric_18_1 SELEX - 46610638 46610655 5.0E-06 TTACCAGCTTGTGCCCCT 18 RARG_nuclearreceptor_full_dimeric_16_1 SELEX + 46604590 46604605 0.0E+00 GAGGTAAAAAGGTCAG 16 RARA_nuclearreceptor_full_dimeric_15_1 SELEX + 46604590 46604604 0.0E+00 GAGGTAAAAAGGTCA 15 TGIF1_MEIS_DBD_dimeric_12_1 SELEX + 46605682 46605693 1.0E-06 TGACAACTGTCA 12 TGIF1_MEIS_DBD_dimeric_12_1 SELEX - 46605682 46605693 1.0E-06 TGACAGTTGTCA 12 V_KLF15_Q2_M01714 TRANSFAC + 46604919 46604932 3.0E-06 GAGTGGGGGTGTTA 14 V_SPI1_01_M01203 TRANSFAC - 46605053 46605069 5.0E-06 AAGAGGAGGAAGTGTGG 17 V_PREP1_01_M01459 TRANSFAC + 46605682 46605697 8.0E-06 TGACAACTGTCAAGCC 16 V_GEN_INI_B_M00315 TRANSFAC - 46605912 46605919 1.0E-05 CCTCATTT 8 V_TCF3_01_M01594 TRANSFAC - 46608512 46608524 9.0E-06 TCTTTGTCATGCT 13 TAL1_TCF3_MA0091.1 JASPAR + 46605095 46605106 8.0E-06 CAAACAGATGTT 12 TAL1_TCF3_MA0091.1 JASPAR - 46605097 46605108 2.0E-06 GAAACATCTGTT 12 V_NF1A_Q6_M02103 TRANSFAC + 46604931 46604946 7.0E-06 TAAGCTGTGTGCCAAT 16 V_RORA1_01_M00156 TRANSFAC + 46604593 46604605 1.0E-05 GTAAAAAGGTCAG 13 V_EOMES_03_M02747 TRANSFAC - 46605067 46605083 4.0E-06 AAGAGGGTGTTAAAAAG 17 V_CEBP_01_M00159 TRANSFAC + 46604565 46604577 9.0E-06 TGTTTGGAAAGCC 13 V_AP4_Q6_M00176 TRANSFAC - 46605753 46605762 5.0E-06 CTCAGCTGGA 10 V_PLAG1_02_M01973 TRANSFAC + 46604736 46604751 1.0E-06 CCCCCCACTAGGCCCC 16 V_SP1_03_M02281 TRANSFAC + 46604713 46604722 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC - 46610633 46610642 3.0E-06 CCCCTCCCCC 10 V_PITX2_Q6_M02114 TRANSFAC + 46605169 46605178 1.0E-06 TGTAATCCCA 10 V_NERF_Q2_M00531 TRANSFAC - 46604758 46604775 0.0E+00 CGGCAGGAAGGAGGTGGC 18 V_COUPTF_Q6_M01036 TRANSFAC - 46605023 46605045 2.0E-06 CGACGTGAACTCTACCCCTTCCC 23 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 46610625 46610640 6.0E-06 CAAGCTGAGGGGGAGG 16 V_PU1_Q4_M01172 TRANSFAC + 46605050 46605068 9.0E-06 CCCCCACACTTCCTCCTCT 19 V_HBP1_Q2_M01661 TRANSFAC - 46605905 46605913 4.0E-06 TTCAATAAA 9 V_GEN_INI3_B_M00314 TRANSFAC - 46605912 46605919 1.0E-05 CCTCATTT 8 V_FKLF_Q5_M01837 TRANSFAC + 46604912 46604921 2.0E-06 GGGGTGGGAG 10 V_COUP_01_M00158 TRANSFAC - 46605027 46605040 4.0E-06 TGAACTCTACCCCT 14 V_NFE4_Q5_M02105 TRANSFAC + 46604691 46604702 0.0E+00 CTCCCTCTCCAG 12 V_TAL1BETAE47_01_M00065 TRANSFAC + 46605094 46605109 1.0E-06 CCAAACAGATGTTTCT 16 V_MZF1_02_M00084 TRANSFAC + 46605010 46605022 1.0E-06 AGGTGAGGGGGAA 13 V_TAL1BETAITF2_01_M00070 TRANSFAC + 46605094 46605109 1.0E-06 CCAAACAGATGTTTCT 16 V_SP4_Q5_M01273 TRANSFAC - 46610633 46610643 5.0E-06 GCCCCTCCCCC 11 V_ELF1_Q6_M00746 TRANSFAC - 46605057 46605068 7.0E-06 AGAGGAGGAAGT 12 V_TAL1_01_M01591 TRANSFAC + 46605058 46605070 5.0E-06 CTTCCTCCTCTTT 13 V_TAL1ALPHAE47_01_M00066 TRANSFAC + 46605094 46605109 9.0E-06 CCAAACAGATGTTTCT 16 V_PLAG1_01_M01778 TRANSFAC - 46604736 46604751 4.0E-06 GGGGCCTAGTGGGGGG 16 V_MYOGNF1_01_M00056 TRANSFAC + 46604536 46604564 5.0E-06 TAGCTGCCCCCGCGGGCGCGCTGTCGGCT 29 V_GEN_INI2_B_M00313 TRANSFAC - 46605912 46605919 1.0E-05 CCTCATTT 8 V_PITX2_Q2_M00482 TRANSFAC + 46605169 46605179 1.0E-06 TGTAATCCCAG 11 V_REST_02_M02256 TRANSFAC + 46605175 46605195 5.0E-06 CCCAGCACTTTGGAAAGCGGA 21 V_ETS1_B_M00339 TRANSFAC - 46604759 46604773 1.0E-05 GCAGGAAGGAGGTGG 15 V_ETS1_B_M00339 TRANSFAC - 46605051 46605065 1.0E-05 GGAGGAAGTGTGGGG 15 V_ZFP281_01_M01597 TRANSFAC - 46604713 46604723 7.0E-06 CGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC + 46610632 46610642 3.0E-06 AGGGGGAGGGG 11 V_MEF3_B_M00319 TRANSFAC + 46605956 46605968 0.0E+00 GGCTCAGGTTTCC 13 V_SOX2_01_M02246 TRANSFAC - 46608510 46608524 0.0E+00 TCTTTGTCATGCTAA 15 V_ZFP281_04_M02831 TRANSFAC - 46610630 46610644 8.0E-06 TGCCCCTCCCCCTCA 15 V_NUR77_Q5_M01217 TRANSFAC - 46604596 46604605 9.0E-06 CTGACCTTTT 10 V_EWSR1FLI1_01_M02252 TRANSFAC - 46604761 46604778 5.0E-06 GGACGGCAGGAAGGAGGT 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 46604999 46605016 2.0E-06 GGGAGGGAGGCAGGTGAG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 46605109 46605126 9.0E-06 GGAAGACGGGAAAGAAGA 18 V_SOX1_03_M02802 TRANSFAC - 46605904 46605919 1.0E-05 CCTCATTTCAATAAAG 16 V_SOX2_Q6_M01272 TRANSFAC - 46608513 46608528 6.0E-06 AGTGTCTTTGTCATGC 16 V_UF1H3BETA_Q6_M01068 TRANSFAC - 46604712 46604725 0.0E+00 GGCGGGGGAGGGGA 14 V_UF1H3BETA_Q6_M01068 TRANSFAC + 46610630 46610643 2.0E-06 TGAGGGGGAGGGGC 14 V_HNF4_01_M00134 TRANSFAC + 46605025 46605043 1.0E-05 GAAGGGGTAGAGTTCACGT 19 V_SP1_Q4_01_M00932 TRANSFAC + 46610632 46610644 8.0E-06 AGGGGGAGGGGCA 13 V_NR2F2_04_M02887 TRANSFAC - 46605141 46605156 5.0E-06 CGCGCCGGGTCAGCCC 16 V_NF1_Q6_M00193 TRANSFAC - 46604930 46604947 4.0E-06 AATTGGCACACAGCTTAA 18 V_NANOG_02_M01247 TRANSFAC + 46608510 46608529 0.0E+00 TTAGCATGACAAAGACACTT 20 V_HSF1_Q6_01_M02017 TRANSFAC - 46605964 46605977 1.0E-06 TAAGTTTCTGGAAA 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.