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HLA-DQB1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 3119 major histocompatibility complex, class II, DQ beta 1 chr6 - 32633966 - 32639466 32634466 Transcription Factor Binding Sites   Download all TFBS in the HLA-DQB1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NF-kappaB_MA0061.1 JASPAR + 32636226 32636235 9.0E-06 GGGGATTCCC 10 PAX6_PAX_DBD_monomeric_19_1 SELEX - 32636417 32636435 4.0E-06 TTTTCTGCCTGAATGCCCT 19 MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 32631343 32631360 5.0E-06 GTAATCAGCCCACAATTA 18 SRY_HMG_DBD_dimeric_13_2 SELEX - 32634710 32634722 4.0E-06 TGAATCGCATTTT 13 POU3F4_POU_DBD_monomeric_11_1 SELEX + 32636407 32636417 6.0E-06 TGCATTATTCA 11 EWSR1-FLI1_MA0149.1 JASPAR + 32638688 32638705 7.0E-06 GAAAAGGGGGAAGGAGTA 18 EWSR1-FLI1_MA0149.1 JASPAR + 32638696 32638713 7.0E-06 GGAAGGAGTAGAGGAAAC 18 ZNF232_C2H2_full_monomeric_19_1 SELEX - 32638653 32638671 0.0E+00 ATGTAAAATGTAGATTTAC 19 NFKB1_MA0105.1 JASPAR - 32636226 32636236 1.0E-06 GGGGAATCCCC 11 NFYA_MA0060.1 JASPAR + 32634513 32634528 1.0E-06 AAGAACCAATCAGCAC 16 NFYA_MA0060.1 JASPAR - 32636298 32636313 0.0E+00 TTTAGCCAATCAGAAA 16 POU2F2_POU_DBD_monomeric_11_1 SELEX - 32638663 32638673 7.0E-06 TTATGTAAAAT 11 SCRT2_C2H2_DBD_monomeric_13_1 SELEX + 32636271 32636283 4.0E-06 TAGCAACAAGTGT 13 Pax4_MA0068.1 JASPAR + 32634706 32634735 8.0E-06 GAAAAAAATGCGATTCAACAGTAAACATCT 30 Pax4_MA0068.1 JASPAR + 32634707 32634736 7.0E-06 AAAAAAATGCGATTCAACAGTAAACATCTC 30 Pax4_MA0068.1 JASPAR + 32635137 32635166 3.0E-06 GAAAACAAGCCAAAAAAAAAAAATTGATAC 30 NFKB2_NFAT_DBD_dimeric_13_1 SELEX + 32636225 32636237 1.0E-06 TGGGGATTCCCCA 13 NFKB2_NFAT_DBD_dimeric_13_1 SELEX - 32636225 32636237 1.0E-06 TGGGGAATCCCCA 13 IRF1_MA0050.1 JASPAR - 32636327 32636338 6.0E-06 CAAAGCAAAACC 12 HMX3_homeodomain_DBD_monomeric_11_1 SELEX + 32636520 32636530 1.0E-06 AGCAATTAAAG 11 Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 32634256 32634265 6.0E-06 AGCAGCTGCC 10 CREB3_bZIP_full_dimeric_14_1 SELEX + 32634601 32634614 5.0E-06 CTGTGACGTCTTCA 14 SCRT1_C2H2_DBD_monomeric_15_1 SELEX + 32636271 32636285 3.0E-06 TAGCAACAAGTGTCA 15 PRDM4_C2H2_full_monomeric_13_1 SELEX - 32638679 32638691 6.0E-06 TTTCAAGTTCCCT 13 NFKB1_NFAT_DBD_dimeric_13_1 SELEX + 32636225 32636237 1.0E-06 TGGGGATTCCCCA 13 NFKB1_NFAT_DBD_dimeric_13_1 SELEX - 32636225 32636237 1.0E-06 TGGGGAATCCCCA 13 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 32631342 32631359 9.0E-06 GTAATTGTGGGCTGATTA 18 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 32631343 32631360 3.0E-06 GTAATCAGCCCACAATTA 18 Evi1_MA0029.1 JASPAR - 32638637 32638650 4.0E-06 AGCATAAGATAATT 14 MTF1_C2H2_DBD_monomeric_14_1 SELEX - 32634603 32634616 6.0E-06 TTTGAAGACGTCAC 14 SPDEF_ETS_full_putative-multimer_16_1 SELEX + 32636021 32636036 6.0E-06 GCATAAAGGAGGAACC 16 HNF4A_MA0114.1 JASPAR + 32634892 32634904 5.0E-06 AGAGCAAAGTTCT 13 POU2F1_POU_DBD_monomeric_12_1 SELEX - 32638663 32638674 6.0E-06 TTTATGTAAAAT 12 HMX2_homeodomain_DBD_monomeric_11_1 SELEX + 32636520 32636530 3.0E-06 AGCAATTAAAG 11 CPEB1_RRM_full_monomeric_8_1 SELEX + 32634459 32634466 4.0E-06 AATAAAAA 8 RORA_1_MA0071.1 JASPAR + 32636453 32636462 4.0E-06 AACTAGGTCA 10 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 32631343 32631360 4.0E-06 GTAATCAGCCCACAATTA 18 Irx3_homeodomain_DBD_dimeric_12_1 SELEX + 32638666 32638677 3.0E-06 TTACATAAAATT 12 RORA_2_MA0072.1 JASPAR + 32636450 32636463 0.0E+00 AGAAACTAGGTCAA 14 HMX1_homeodomain_DBD_monomeric_11_1 SELEX + 32636520 32636530 1.0E-06 AGCAATTAAAG 11 V_FOXP1_01_M00987 TRANSFAC + 32631357 32631376 2.0E-06 TTACTTAAAGTGTTTATCAT 20 V_FOXP1_01_M00987 TRANSFAC - 32635135 32635154 8.0E-06 TTTTTTTGGCTTGTTTTCTT 20 V_FOXP1_01_M00987 TRANSFAC - 32635139 32635158 0.0E+00 TTTTTTTTTTTGGCTTGTTT 20 V_NFKB_C_M00208 TRANSFAC - 32636225 32636236 7.0E-06 GGGGAATCCCCA 12 V_NFKB_C_M00208 TRANSFAC + 32636226 32636237 5.0E-06 GGGGATTCCCCA 12 V_SPI1_01_M01203 TRANSFAC + 32638689 32638705 3.0E-06 AAAAGGGGGAAGGAGTA 17 V_ZFP187_03_M02830 TRANSFAC + 32631373 32631386 0.0E+00 TCATGTACCAATAT 14 V_NFKB_Q6_01_M00774 TRANSFAC - 32636225 32636240 7.0E-06 GACTGGGGAATCCCCA 16 V_TBX15_01_M01263 TRANSFAC - 32636030 32636048 1.0E-05 AGGTGTGCATTTGGTTCCT 19 V_ATF_01_M00017 TRANSFAC + 32634601 32634614 7.0E-06 CTGTGACGTCTTCA 14 V_ALX4_01_M00619 TRANSFAC - 32636194 32636206 4.0E-06 CCTCAGAATAAAC 13 V_SMAD3_Q6_01_M01888 TRANSFAC - 32636350 32636362 5.0E-06 AGGCAGACACAAC 13 V_BCL6B_03_M02740 TRANSFAC - 32634897 32634912 4.0E-06 TCCTTCTAAGAACTTT 16 V_NFY_Q6_M00185 TRANSFAC + 32634515 32634525 4.0E-06 GAACCAATCAG 11 V_NFY_Q6_M00185 TRANSFAC - 32636301 32636311 1.0E-06 TAGCCAATCAG 11 V_RORA1_01_M00156 TRANSFAC + 32636451 32636463 2.0E-06 GAAACTAGGTCAA 13 V_BCL6_01_M01183 TRANSFAC - 32635138 32635153 9.0E-06 TTTTTTGGCTTGTTTT 16 V_RORA_Q4_M01138 TRANSFAC + 32636452 32636462 2.0E-06 AAACTAGGTCA 11 V_ISL2_01_M01328 TRANSFAC - 32638673 32638688 1.0E-05 CAAGTTCCCTTAATTT 16 V_PITX3_Q2_M01735 TRANSFAC - 32636148 32636156 2.0E-06 TGGATTAGA 9 V_HNF3_Q6_01_M01012 TRANSFAC - 32631201 32631218 6.0E-06 ATTCCTGTTTGTTCTGTG 18 V_GABPA_04_M02858 TRANSFAC - 32636423 32636438 2.0E-06 CCTTTTTCTGCCTGAA 16 V_HNF4A_03_M02220 TRANSFAC + 32634892 32634904 5.0E-06 AGAGCAAAGTTCT 13 V_SP1_02_M01303 TRANSFAC - 32632403 32632413 8.0E-06 GGGGCGGGGAC 11 V_PRX2_Q2_M02115 TRANSFAC + 32638671 32638679 5.0E-06 TAAAATTAA 9 V_AP4_Q6_02_M01860 TRANSFAC - 32632104 32632116 5.0E-06 ACAGCTGCGCGCA 13 V_PU1_Q4_M01172 TRANSFAC - 32636025 32636043 1.0E-06 TGCATTTGGTTCCTCCTTT 19 V_NFY_Q6_01_M00775 TRANSFAC - 32636302 32636314 0.0E+00 TTTTAGCCAATCA 13 V_TCFAP2E_04_M02926 TRANSFAC - 32634564 32634577 2.0E-06 TTCACAAAAAAAAT 14 V_TCFAP2E_04_M02926 TRANSFAC + 32634701 32634714 4.0E-06 CAAAAGAAAAAAAT 14 V_TCFAP2E_04_M02926 TRANSFAC + 32634702 32634715 5.0E-06 AAAAGAAAAAAATG 14 V_TCFAP2E_04_M02926 TRANSFAC + 32635143 32635156 7.0E-06 AAGCCAAAAAAAAA 14 V_NFY_C_M00209 TRANSFAC + 32636300 32636313 0.0E+00 TCTGATTGGCTAAA 14 V_ELF4_04_M02850 TRANSFAC - 32634562 32634578 1.0E-06 CTTCACAAAAAAAATGT 17 V_ELF4_04_M02850 TRANSFAC + 32634700 32634716 9.0E-06 GCAAAAGAAAAAAATGC 17 V_ELF4_04_M02850 TRANSFAC + 32635143 32635159 8.0E-06 AAGCCAAAAAAAAAAAA 17 V_DBP_Q6_01_M01872 TRANSFAC - 32638666 32638673 5.0E-06 TTATGTAA 8 V_TBX18_01_M01262 TRANSFAC - 32636030 32636048 4.0E-06 AGGTGTGCATTTGGTTCCT 19 V_FOXO1_02_M00474 TRANSFAC - 32635134 32635147 7.0E-06 GGCTTGTTTTCTTG 14 V_TCFAP2C_03_M02821 TRANSFAC - 32634678 32634692 7.0E-06 AATCCCCGAGGCATT 15 V_HNF3G_Q4_M02015 TRANSFAC - 32631206 32631213 7.0E-06 TGTTTGTT 8 V_ARID5A_03_M02736 TRANSFAC - 32631376 32631389 1.0E-06 CTAATATTGGTACA 14 V_ARID5A_03_M02736 TRANSFAC + 32631380 32631393 3.0E-06 CCAATATTAGGATA 14 V_KROX_Q6_M00982 TRANSFAC + 32632885 32632898 6.0E-06 GCCGCCCCCGCAGC 14 V_IRX4_01_M01410 TRANSFAC - 32631367 32631383 4.0E-06 TTGGTACATGATAAACA 17 V_AMEF2_Q6_M00403 TRANSFAC - 32631385 32631402 6.0E-06 CACTTTATATATCCTAAT 18 V_HOXB9_01_M01426 TRANSFAC + 32636518 32636533 4.0E-06 AGAGCAATTAAAGCAT 16 V_IRF3_Q3_M01279 TRANSFAC - 32634394 32634406 6.0E-06 TGCTTTTCCCTTC 13 V_HNF3_Q6_M00791 TRANSFAC + 32631203 32631215 8.0E-06 CAGAACAAACAGG 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 32631203 32631213 3.0E-06 TGTTTGTTCTG 11 V_EGR1_Q6_M01873 TRANSFAC - 32632886 32632895 4.0E-06 GCGGGGGCGG 10 V_NKX52_01_M01315 TRANSFAC + 32636517 32636533 0.0E+00 CAGAGCAATTAAAGCAT 17 V_SFPI1_04_M02896 TRANSFAC + 32638673 32638686 3.0E-06 AAATTAAGGGAACT 14 V_OCT1_04_M00138 TRANSFAC - 32638650 32638672 4.0E-06 TATGTAAAATGTAGATTTACTGA 23 V_OCT1_04_M00138 TRANSFAC - 32638657 32638679 2.0E-06 TTAATTTTATGTAAAATGTAGAT 23 V_GR_01_M00955 TRANSFAC - 32631198 32631224 1.0E-05 GAGTCTATTCCTGTTTGTTCTGTGTGT 27 V_HMX1_02_M01481 TRANSFAC + 32636517 32636533 0.0E+00 CAGAGCAATTAAAGCAT 17 V_NFKAPPAB50_01_M00051 TRANSFAC + 32636226 32636235 2.0E-06 GGGGATTCCC 10 V_ERBETA_Q5_M01875 TRANSFAC + 32636355 32636369 9.0E-06 GTCTGCCTGGCCCAG 15 V_HNF4A_Q6_01_M02016 TRANSFAC + 32634893 32634907 9.0E-06 GAGCAAAGTTCTTAG 15 V_GR_Q6_02_M01836 TRANSFAC - 32631202 32631214 4.0E-06 CTGTTTGTTCTGT 13 V_ELF1_Q6_M00746 TRANSFAC + 32638702 32638713 8.0E-06 AGTAGAGGAAAC 12 V_CAAT_01_M00254 TRANSFAC - 32636302 32636313 0.0E+00 TTTAGCCAATCA 12 V_ALPHACP1_01_M00687 TRANSFAC - 32636301 32636311 3.0E-06 TAGCCAATCAG 11 V_MTF1_06_M02882 TRANSFAC + 32634455 32634468 7.0E-06 AAAGAATAAAAACC 14 V_TAL1_01_M01591 TRANSFAC - 32636439 32636451 6.0E-06 CTTTCTTCTCTGG 13 V_CEBPA_01_M00116 TRANSFAC + 32638663 32638676 7.0E-06 ATTTTACATAAAAT 14 V_ATF1_03_M02738 TRANSFAC + 32634600 32634615 8.0E-06 ACTGTGACGTCTTCAA 16 V_AIRE_01_M00999 TRANSFAC + 32634901 32634926 2.0E-06 TTCTTAGAAGGAAATAATGGTAAGTT 26 V_NFY_01_M00287 TRANSFAC + 32634513 32634528 1.0E-06 AAGAACCAATCAGCAC 16 V_NFY_01_M00287 TRANSFAC - 32636298 32636313 0.0E+00 TTTAGCCAATCAGAAA 16 V_PLZF_02_M01075 TRANSFAC - 32638651 32638679 7.0E-06 TTAATTTTATGTAAAATGTAGATTTACTG 29 V_EGR1_06_M02744 TRANSFAC + 32632885 32632898 7.0E-06 GCCGCCCCCGCAGC 14 V_TBX22_01_M01195 TRANSFAC - 32636030 32636048 2.0E-06 AGGTGTGCATTTGGTTCCT 19 V_TBX22_01_M01195 TRANSFAC - 32636278 32636296 8.0E-06 AGGCTCTAAAGTGACACTT 19 V_TCFAP2A_03_M02819 TRANSFAC - 32634678 32634692 8.0E-06 AATCCCCGAGGCATT 15 V_NFKAPPAB_01_M00054 TRANSFAC + 32636226 32636235 9.0E-06 GGGGATTCCC 10 V_SRF_06_M02916 TRANSFAC - 32634562 32634578 2.0E-06 CTTCACAAAAAAAATGT 17 V_SRF_06_M02916 TRANSFAC + 32634700 32634716 4.0E-06 GCAAAAGAAAAAAATGC 17 V_EWSR1FLI1_01_M02252 TRANSFAC + 32638688 32638705 7.0E-06 GAAAAGGGGGAAGGAGTA 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 32638696 32638713 7.0E-06 GGAAGGAGTAGAGGAAAC 18 V_VDR_Q3_M00444 TRANSFAC + 32638693 32638707 4.0E-06 GGGGGAAGGAGTAGA 15 V_SIX6_08_M02897 TRANSFAC - 32631385 32631401 3.0E-06 ACTTTATATATCCTAAT 17 V_SMAD3_Q6_M00701 TRANSFAC + 32636354 32636362 1.0E-05 TGTCTGCCT 9 V_PR_02_M00957 TRANSFAC - 32631198 32631224 2.0E-06 GAGTCTATTCCTGTTTGTTCTGTGTGT 27 V_SP1_Q2_01_M00933 TRANSFAC + 32632405 32632414 7.0E-06 CCCCGCCCCT 10 V_FOXO4_01_M00472 TRANSFAC - 32631363 32631373 8.0E-06 ATAAACACTTT 11 V_HNF4_01_M00134 TRANSFAC + 32634889 32634907 5.0E-06 AGAAGAGCAAAGTTCTTAG 19 V_HMX3_02_M01413 TRANSFAC + 32636517 32636533 0.0E+00 CAGAGCAATTAAAGCAT 17 V_NFYA_Q5_M02106 TRANSFAC + 32634515 32634528 3.0E-06 GAACCAATCAGCAC 14 V_NFYA_Q5_M02106 TRANSFAC - 32636298 32636311 0.0E+00 TAGCCAATCAGAAA 14 V_TCF3_05_M02920 TRANSFAC + 32634698 32634712 7.0E-06 AGGCAAAAGAAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 32635143 32635157 0.0E+00 AAGCCAAAAAAAAAA 15 V_PAX4_04_M00380 TRANSFAC + 32635138 32635167 4.0E-06 AAAACAAGCCAAAAAAAAAAAATTGATACC 30 V_SMAD1_01_M01590 TRANSFAC + 32634701 32634712 7.0E-06 CAAAAGAAAAAA 12 V_RORA2_01_M00157 TRANSFAC + 32636451 32636463 0.0E+00 GAAACTAGGTCAA 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.