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HLA-DPA1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 3113 major histocompatibility complex, class II, DP alpha 1 chr6 - 33048055 - 33053555 33048555 Transcription Factor Binding Sites   Download all TFBS in the HLA-DPA1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX + 33043642 33043652 4.0E-06 AATGACTCATA 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX - 33043642 33043652 8.0E-06 TATGAGTCATT 11 CTCF_MA0139.1 JASPAR - 33050665 33050683 9.0E-06 TGACCTCCAGGGTGCGCTG 19 SPIC_ETS_full_monomeric_14_1 SELEX + 33047969 33047982 3.0E-06 GAAAAGAGAAAGAA 14 SOX21_HMG_DBD_dimeric_13_2 SELEX + 33048039 33048051 1.0E-05 GAAATGTCAGTCA 13 RARA_nuclearreceptor_full_dimeric_18_1 SELEX - 33048123 33048140 9.0E-06 ACGTTTCACGTGGGGTCA 18 HSF1_HSF_full_trimeric_13_1 SELEX - 33050745 33050757 8.0E-06 TCCCAGAACATTC 13 EWSR1-FLI1_MA0149.1 JASPAR + 33047975 33047992 1.0E-06 AGAAAGAAGGAAGGGAGG 18 ISL2_homeodomain_DBD_monomeric_8_1 SELEX - 33043581 33043588 1.0E-05 GCACTTAA 8 TEAD1_TEA_full_monomeric_10_1 SELEX - 33050742 33050751 9.0E-06 AACATTCCAC 10 TEAD3_TEA_DBD_monomeric_8_1 SELEX - 33050743 33050750 1.0E-05 ACATTCCA 8 Nkx3-2_MA0122.1 JASPAR + 33043581 33043589 1.0E-05 TTAAGTGCA 9 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX - 33048487 33048495 8.0E-06 CCCATTAAA 9 JDP2_bZIP_full_dimeric_9_1 SELEX + 33043643 33043651 2.0E-06 ATGACTCAT 9 JDP2_bZIP_full_dimeric_9_1 SELEX - 33043643 33043651 4.0E-06 ATGAGTCAT 9 FOXI1_forkhead_full_dimeric_17_1 SELEX + 33044119 33044135 1.0E-06 ATGGGTACAGTAAACAG 17 ETS1_ETS_full_dimeric_18_1 SELEX + 33048617 33048634 4.0E-06 GCCAGAAGGACATCCTGG 18 ETS1_ETS_full_dimeric_18_1 SELEX - 33048617 33048634 2.0E-06 CCAGGATGTCCTTCTGGC 18 TEAD4_TEA_DBD_monomeric_10_1 SELEX - 33050742 33050751 8.0E-06 AACATTCCAC 10 RORA_2_MA0072.1 JASPAR + 33050619 33050632 4.0E-06 TTGAACTGGGTCAG 14 V_HSF2_01_M00147 TRANSFAC + 33050744 33050753 1.0E-05 GGAATGTTCT 10 RXR_RAR_DR5_MA0159.1 JASPAR - 33050609 33050625 4.0E-06 AGTTCAAATACATTTCA 17 V_AP1_Q2_M00173 TRANSFAC + 33043642 33043652 6.0E-06 AATGACTCATA 11 V_GEN_INI_B_M00315 TRANSFAC - 33050633 33050640 1.0E-05 CCTCATTT 8 V_ZFP410_04_M02936 TRANSFAC + 33048096 33048112 3.0E-06 TCCTCCCGCCCCTGTTT 17 V_STAT_Q6_M00777 TRANSFAC + 33050745 33050757 5.0E-06 GAATGTTCTGGGA 13 V_IRF_Q6_01_M00972 TRANSFAC + 33047970 33047980 2.0E-06 AAAAGAGAAAG 11 V_IRF2_Q6_M01882 TRANSFAC + 33047968 33047983 4.0E-06 GGAAAAGAGAAAGAAG 16 V_HNF3_Q6_01_M01012 TRANSFAC - 33050580 33050597 4.0E-06 ATTCCTGTTTGTTCTAGT 18 V_FOXJ1_03_M02750 TRANSFAC + 33044125 33044140 9.0E-06 ACAGTAAACAGAGAGA 16 V_NERF_Q2_M00531 TRANSFAC - 33048496 33048513 4.0E-06 CTCCAGGAAGCGCTGTGT 18 V_LDSPOLYA_B_M00317 TRANSFAC - 33048257 33048272 8.0E-06 GGCCTGTTTTCTCACC 16 V_CEBPB_01_M00109 TRANSFAC + 33050721 33050734 3.0E-06 ATATTGAGCAAGAT 14 V_LXRB_RXRA_Q5_M02021 TRANSFAC + 33050676 33050690 1.0E-06 GGAGGTCACTGATGT 15 V_BARBIE_01_M00238 TRANSFAC - 33043590 33043604 5.0E-06 ATATAAAGCCTGTGA 15 V_AP1_Q6_M00174 TRANSFAC + 33043642 33043652 5.0E-06 AATGACTCATA 11 V_BACH1_01_M00495 TRANSFAC - 33043640 33043654 7.0E-06 TGTATGAGTCATTGC 15 V_COMP1_01_M00057 TRANSFAC - 33050702 33050725 1.0E-06 AATATTCTTTGACAGGAGCAGGTC 24 V_GEN_INI3_B_M00314 TRANSFAC - 33050633 33050640 1.0E-05 CCTCATTT 8 V_PR_01_M00954 TRANSFAC + 33051046 33051072 4.0E-06 ATGTTAGGGTATTTGTGTTCTCCAGGA 27 V_HNF3G_Q4_M02015 TRANSFAC - 33050585 33050592 7.0E-06 TGTTTGTT 8 V_ARID5A_03_M02736 TRANSFAC + 33043733 33043746 0.0E+00 CTAATATTTCAAAC 14 V_NKX26_01_M01322 TRANSFAC - 33043577 33043592 5.0E-06 TGATGCACTTAAGATG 16 V_POLY_C_M00212 TRANSFAC + 33048236 33048253 0.0E+00 CAGTAAATTCTCTCTCTG 18 V_DOBOX4_01_M01359 TRANSFAC + 33050762 33050778 8.0E-06 AAAACAGATACCCAAGT 17 V_KROX_Q6_M00982 TRANSFAC + 33048431 33048444 1.0E-06 TCCGCCCCCTCCCC 14 V_CEBPB_02_M00117 TRANSFAC - 33050721 33050734 1.0E-05 ATCTTGCTCAATAT 14 V_AP1_Q6_01_M00925 TRANSFAC + 33043643 33043651 4.0E-06 ATGACTCAT 9 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 33050582 33050592 2.0E-06 TGTTTGTTCTA 11 V_IRF_Q6_M00772 TRANSFAC - 33047970 33047984 6.0E-06 CCTTCTTTCTCTTTT 15 V_MEF2_03_M00232 TRANSFAC - 33043596 33043617 1.0E-05 GAAAGGTCTGAAAATATAAAGC 22 V_JUNDM2_04_M02876 TRANSFAC + 33043639 33043654 4.0E-06 AGCAATGACTCATACA 16 V_JUNDM2_04_M02876 TRANSFAC - 33043640 33043655 6.0E-06 TTGTATGAGTCATTGC 16 V_SP1SP3_Q4_M01219 TRANSFAC + 33048143 33048153 5.0E-06 CCGCCTCCTCC 11 V_SP1SP3_Q4_M01219 TRANSFAC + 33048432 33048442 1.0E-06 CCGCCCCCTCC 11 V_GR_Q6_M00192 TRANSFAC + 33051050 33051068 9.0E-06 TAGGGTATTTGTGTTCTCC 19 V_AP1_C_M00199 TRANSFAC - 33043643 33043651 8.0E-06 ATGAGTCAT 9 V_XFD2_01_M00268 TRANSFAC + 33044125 33044138 7.0E-06 ACAGTAAACAGAGA 14 V_CTCF_01_M01200 TRANSFAC - 33050665 33050684 1.0E-05 GTGACCTCCAGGGTGCGCTG 20 V_GATA4_Q3_M00632 TRANSFAC + 33047975 33047986 7.0E-06 AGAAAGAAGGAA 12 V_AP1_Q4_01_M00926 TRANSFAC - 33043643 33043650 1.0E-05 TGAGTCAT 8 V_NKX25_03_M01414 TRANSFAC - 33043577 33043592 6.0E-06 TGATGCACTTAAGATG 16 V_TEF1_Q6_03_M01817 TRANSFAC + 33050742 33050750 6.0E-06 GTGGAATGT 9 V_GEN_INI2_B_M00313 TRANSFAC - 33050633 33050640 1.0E-05 CCTCATTT 8 V_FRA1_Q5_M01267 TRANSFAC - 33043643 33043650 1.0E-05 TGAGTCAT 8 V_ASCL2_04_M02841 TRANSFAC + 33048189 33048204 9.0E-06 CTCGCCCCTCCCTAGT 16 V_SRF_01_M00152 TRANSFAC - 33051040 33051057 1.0E-05 ATACCCTAACATGGCGCT 18 V_RXR_RAR_01_M02272 TRANSFAC - 33050609 33050625 4.0E-06 AGTTCAAATACATTTCA 17 V_IRF1_Q6_01_M01881 TRANSFAC - 33047969 33047982 3.0E-06 TTCTTTCTCTTTTC 14 V_HFH3_01_M00289 TRANSFAC + 33051052 33051064 9.0E-06 GGGTATTTGTGTT 13 V_HSF2_02_M01244 TRANSFAC + 33050745 33050757 9.0E-06 GAATGTTCTGGGA 13 V_EWSR1FLI1_01_M02252 TRANSFAC + 33047975 33047992 1.0E-06 AGAAAGAAGGAAGGGAGG 18 V_PR_02_M00957 TRANSFAC - 33050577 33050603 4.0E-06 GCAAGGATTCCTGTTTGTTCTAGTTGC 27 V_CTF1_01_M01196 TRANSFAC + 33051034 33051047 9.0E-06 TGGCCCAGCGCCAT 14 V_FREAC4_01_M00292 TRANSFAC + 33044123 33044138 9.0E-06 GTACAGTAAACAGAGA 16 TLX1_NFIC_MA0119.1 JASPAR + 33051034 33051047 9.0E-06 TGGCCCAGCGCCAT 14 V_DTYPEPA_B_M00334 TRANSFAC - 33048486 33048495 6.0E-06 CCCATTAAAC 10 V_CEBPG_Q6_01_M01869 TRANSFAC - 33043794 33043805 6.0E-06 GATGGCAAAATG 12 V_SMAD1_01_M01590 TRANSFAC + 33047971 33047982 1.0E-05 AAAGAGAAAGAA 12 V_RORA2_01_M00157 TRANSFAC + 33050620 33050632 4.0E-06 TGAACTGGGTCAG 13 V_PPARA_01_M00242 TRANSFAC - 33051022 33051041 1.0E-06 CTGGGCCAGGTAAAAGTACA 20 V_NANOG_02_M01247 TRANSFAC + 33047967 33047986 7.0E-06 TGGAAAAGAGAAAGAAGGAA 20 V_HSF1_Q6_01_M02017 TRANSFAC + 33050745 33050758 7.0E-06 GAATGTTCTGGGAC 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.