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HLA-A Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 3105 major histocompatibility complex, class I, A chr6 + 29905246 - 29910746 29910246 Transcription Factor Binding Sites   Download all TFBS in the HLA-A promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HSF2_HSF_DBD_trimeric_13_1 SELEX + 29909850 29909862 2.0E-06 TTCTAGAAGAGTC 13 Sox17_MA0078.1 JASPAR + 29909543 29909551 9.0E-06 TACATTGTC 9 NF-kappaB_MA0061.1 JASPAR + 29910130 29910139 9.0E-06 GGGGATTCCC 10 POU2F1_POU_DBD_dimeric_14_1 SELEX + 29913207 29913220 5.0E-06 CATGAATATTTTTT 14 POU2F1_POU_DBD_dimeric_14_1 SELEX - 29913207 29913220 2.0E-06 AAAAAATATTCATG 14 RARB_nuclearreceptor_full_dimeric_16_1 SELEX - 29914317 29914332 3.0E-06 AAAGAACATAAGTTCA 16 POU3F3_POU_DBD_monomeric_12_1 SELEX + 29913208 29913219 3.0E-06 ATGAATATTTTT 12 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 29905307 29905323 8.0E-06 ATCAATCAGAGTGAACA 17 POU3F2_POU_DBD_monomeric_13_1 SELEX + 29913207 29913219 4.0E-06 CATGAATATTTTT 13 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 29914283 29914294 8.0E-06 GCTTTTCTCACC 12 NFKB1_MA0105.1 JASPAR + 29910130 29910140 0.0E+00 GGGGATTCCCC 11 NFKB1_MA0105.1 JASPAR - 29910130 29910140 1.0E-06 GGGGAATCCCC 11 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX - 29914314 29914331 7.0E-06 AAGAACATAAGTTCACGT 18 Pax4_MA0068.1 JASPAR + 29909757 29909786 7.0E-06 GATTAAAAACAAAAACAACAACAACAAAAA 30 Pax4_MA0068.1 JASPAR + 29909762 29909791 9.0E-06 AAAACAAAAACAACAACAACAAAAATCTAC 30 Pax4_MA0068.1 JASPAR - 29913191 29913220 1.0E-06 AAAAAATATTCATGAACAAATTCATATCCA 30 NFKB2_NFAT_DBD_dimeric_13_1 SELEX + 29910129 29910141 1.0E-06 TGGGGATTCCCCA 13 NFKB2_NFAT_DBD_dimeric_13_1 SELEX - 29910129 29910141 1.0E-06 TGGGGAATCCCCA 13 IRF1_MA0050.1 JASPAR + 29909925 29909936 5.0E-06 AAAAGTGAAAGG 12 HSF4_HSF_DBD_trimeric_13_1 SELEX + 29909850 29909862 5.0E-06 TTCTAGAAGAGTC 13 Pou2f2_POU_DBD_dimeric_14_1 SELEX - 29913207 29913220 4.0E-06 AAAAAATATTCATG 14 POU2F3_POU_DBD_dimeric_12_1 SELEX + 29913208 29913219 3.0E-06 ATGAATATTTTT 12 POU2F3_POU_DBD_dimeric_12_1 SELEX - 29913208 29913219 2.0E-06 AAAAATATTCAT 12 SOX14_HMG_DBD_dimeric_15_1 SELEX + 29905254 29905268 7.0E-06 ATGAAAAGCAATCAG 15 PBX1_MA0070.1 JASPAR + 29905305 29905316 2.0E-06 TCATCAATCAGA 12 NFKB1_NFAT_DBD_dimeric_13_1 SELEX + 29910129 29910141 1.0E-06 TGGGGATTCCCCA 13 NFKB1_NFAT_DBD_dimeric_13_1 SELEX - 29910129 29910141 1.0E-06 TGGGGAATCCCCA 13 POU1F1_POU_DBD_monomeric_17_1 SELEX + 29913205 29913221 0.0E+00 TTCATGAATATTTTTTT 17 NKX2-3_homeodomain_full_monomeric_10_1 SELEX - 29908913 29908922 5.0E-06 TCCACTTAAA 10 Foxd3_MA0041.1 JASPAR + 29913210 29913221 0.0E+00 GAATATTTTTTT 12 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 29909924 29909938 1.0E-06 GAAAAGTGAAAGGAG 15 Nkx3-2_MA0122.1 JASPAR + 29908914 29908922 2.0E-06 TTAAGTGGA 9 POU3F1_POU_DBD_monomeric_12_2 SELEX + 29913208 29913219 3.0E-06 ATGAATATTTTT 12 Hltf_MA0109.1 JASPAR - 29914214 29914223 4.0E-06 AACCATATAT 10 POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 29913208 29913219 4.0E-06 ATGAATATTTTT 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 29913208 29913219 2.0E-06 AAAAATATTCAT 12 TBX21_TBX_full_dimeric_19_1 SELEX - 29910220 29910238 7.0E-06 CGACACCCAATGGGAGTGA 19 NR3C1_MA0113.1 JASPAR - 29912814 29912831 0.0E+00 GAGAAGAAAATGTCCTGT 18 HMX2_homeodomain_DBD_monomeric_11_1 SELEX - 29908912 29908922 7.0E-06 TCCACTTAAAA 11 POU3F3_POU_DBD_dimeric_12_1 SELEX + 29913208 29913219 7.0E-06 ATGAATATTTTT 12 POU3F3_POU_DBD_dimeric_12_1 SELEX - 29913208 29913219 2.0E-06 AAAAATATTCAT 12 POU3F2_POU_DBD_monomeric_12_1 SELEX + 29905402 29905413 7.0E-06 TTAAGCAAATTT 12 RARA_nuclearreceptor_full_dimeric_15_1 SELEX - 29914317 29914331 4.0E-06 AAGAACATAAGTTCA 15 RREB1_MA0073.1 JASPAR + 29909764 29909783 9.0E-06 AACAAAAACAACAACAACAA 20 IRF2_MA0051.1 JASPAR + 29909554 29909571 4.0E-06 GGAAAGTGCAACTTAGTA 18 IRF2_MA0051.1 JASPAR + 29909924 29909941 1.0E-06 GAAAAGTGAAAGGAGAGG 18 Zfx_MA0146.1 JASPAR - 29910931 29910944 8.0E-06 GGCGCCTGGGCCTC 14 V_RUSH1A_02_M01107 TRANSFAC - 29914214 29914223 4.0E-06 AACCATATAT 10 V_FOXP1_01_M00987 TRANSFAC - 29909764 29909783 0.0E+00 TTGTTGTTGTTGTTTTTGTT 20 V_FOXP1_01_M00987 TRANSFAC - 29909767 29909786 0.0E+00 TTTTTGTTGTTGTTGTTTTT 20 V_FOXP1_01_M00987 TRANSFAC - 29909770 29909789 1.0E-06 AGATTTTTGTTGTTGTTGTT 20 V_FOXP1_01_M00987 TRANSFAC + 29913206 29913225 6.0E-06 TCATGAATATTTTTTTCTAT 20 V_NFKB_C_M00208 TRANSFAC - 29910113 29910124 6.0E-06 TGGGACTCCCCA 12 V_NFKB_C_M00208 TRANSFAC - 29910129 29910140 7.0E-06 GGGGAATCCCCA 12 V_NFKB_C_M00208 TRANSFAC + 29910130 29910141 5.0E-06 GGGGATTCCCCA 12 V_DEC2_Q2_M01843 TRANSFAC - 29914312 29914321 3.0E-06 GTTCACGTGG 10 V_XPF1_Q6_M00684 TRANSFAC - 29905360 29905369 5.0E-06 TCAGATGAAC 10 V_CEBP_Q3_M00770 TRANSFAC + 29905267 29905278 8.0E-06 AGATTAGGCAAT 12 V_HMGIY_Q3_M01010 TRANSFAC + 29905271 29905285 8.0E-06 TAGGCAATTTTTTTC 15 V_HMGIY_Q3_M01010 TRANSFAC + 29913207 29913221 8.0E-06 CATGAATATTTTTTT 15 V_FOXD3_01_M00130 TRANSFAC + 29913210 29913221 0.0E+00 GAATATTTTTTT 12 V_BCL6_01_M01183 TRANSFAC - 29905395 29905410 6.0E-06 TTTGCTTAAGTTCTTT 16 V_BCL6_01_M01183 TRANSFAC + 29909583 29909598 8.0E-06 CCTGTTGTAATGCTTT 16 V_MAFB_03_M02879 TRANSFAC - 29905242 29905256 5.0E-06 CATTTACAAAAATGA 11 V_MAFB_03_M02879 TRANSFAC - 29905345 29905359 3.0E-06 AGATGGCAAAATTTT 15 V_FOXJ1_04_M02854 TRANSFAC + 29909769 29909783 2.0E-06 AAACAACAACAACAA 15 V_IRF_Q6_01_M00972 TRANSFAC + 29909925 29909935 0.0E+00 AAAAGTGAAAG 11 V_IRF2_Q6_M01882 TRANSFAC + 29909923 29909938 1.0E-06 TGAAAAGTGAAAGGAG 16 V_POU1F1_Q6_M00744 TRANSFAC - 29909606 29909615 1.0E-06 ATGTATAAAT 10 V_POU1F1_Q6_M00744 TRANSFAC + 29913208 29913217 2.0E-06 ATGAATATTT 10 V_AP2_Q6_01_M00915 TRANSFAC + 29910524 29910536 9.0E-06 TCGCCCCCAGGCT 13 V_IRF3_05_M02767 TRANSFAC - 29910148 29910161 2.0E-06 GAGAAAAGAAACTG 14 V_P50RELAP65_Q5_01_M01224 TRANSFAC + 29910131 29910142 5.0E-06 GGGATTCCCCAA 12 V_SPZ1_01_M00446 TRANSFAC - 29910347 29910361 5.0E-06 GGAGGAGGGTTCGGG 15 V_PPAR_DR1_Q2_M00763 TRANSFAC + 29910914 29910926 7.0E-06 AGACCCTTGCCCC 13 V_PRX2_Q2_M02115 TRANSFAC + 29909515 29909523 7.0E-06 TTAAAGTAA 9 V_NR3C1_01_M02219 TRANSFAC - 29912814 29912831 0.0E+00 GAGAAGAAAATGTCCTGT 18 V_TCFAP2E_04_M02926 TRANSFAC - 29905276 29905289 3.0E-06 TGCAGAAAAAAATT 14 V_TCFAP2E_04_M02926 TRANSFAC - 29909844 29909857 4.0E-06 TTCTAGAAGAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 29913213 29913226 1.0E-06 TATAGAAAAAAATA 14 V_TCFAP2E_04_M02926 TRANSFAC - 29913214 29913227 8.0E-06 CTATAGAAAAAAAT 14 V_CDX_Q5_M00991 TRANSFAC - 29913193 29913210 8.0E-06 CATGAACAAATTCATATC 18 V_CEBPB_01_M00109 TRANSFAC + 29905267 29905280 2.0E-06 AGATTAGGCAATTT 14 V_REX1_01_M01695 TRANSFAC - 29909412 29909421 1.0E-05 GAAGCCATTA 10 V_NFY_C_M00209 TRANSFAC - 29910248 29910261 5.0E-06 ACTGATTGGCTTCT 14 V_ELF4_04_M02850 TRANSFAC - 29905274 29905290 9.0E-06 GTGCAGAAAAAAATTGC 17 V_ELF4_04_M02850 TRANSFAC - 29913210 29913226 2.0E-06 TATAGAAAAAAATATTC 17 V_ELF4_04_M02850 TRANSFAC - 29913212 29913228 6.0E-06 ACTATAGAAAAAAATAT 17 V_COMP1_01_M00057 TRANSFAC + 29910104 29910127 6.0E-06 TGTATGGATTGGGGAGTCCCAGCC 24 V_POU3F2_01_M00463 TRANSFAC + 29909602 29909615 5.0E-06 ACACATTTATACAT 14 V_POU3F2_01_M00463 TRANSFAC + 29913196 29913209 1.0E-06 ATGAATTTGTTCAT 14 V_POU3F2_01_M00463 TRANSFAC - 29913196 29913209 1.0E-06 ATGAACAAATTCAT 14 V_POU3F2_01_M00463 TRANSFAC + 29913208 29913221 3.0E-06 ATGAATATTTTTTT 14 V_CEBPE_Q6_M01868 TRANSFAC - 29905269 29905282 0.0E+00 AAAAATTGCCTAAT 14 V_OCT1_02_M00136 TRANSFAC - 29913205 29913219 1.0E-06 AAAAATATTCATGAA 15 V_ZFP105_03_M02827 TRANSFAC + 29909769 29909783 9.0E-06 AAACAACAACAACAA 15 V_ZFP105_03_M02827 TRANSFAC + 29909772 29909786 9.0E-06 CAACAACAACAAAAA 15 V_SOX8_04_M02912 TRANSFAC - 29913202 29913215 3.0E-06 ATATTCATGAACAA 14 V_NKX31_02_M02782 TRANSFAC - 29908910 29908926 3.0E-06 TTTCTCCACTTAAAACA 17 V_MRF2_01_M00454 TRANSFAC - 29909453 29909466 2.0E-06 CTCCTCAATACAAA 14 V_IRF2_01_M00063 TRANSFAC + 29909924 29909936 0.0E+00 GAAAAGTGAAAGG 13 V_CEBPD_Q6_M00621 TRANSFAC - 29905268 29905279 6.0E-06 AATTGCCTAATC 12 V_FOXK1_04_M02856 TRANSFAC + 29909771 29909785 0.0E+00 ACAACAACAACAAAA 15 V_IRF3_Q3_M01279 TRANSFAC - 29909926 29909938 4.0E-06 CTCCTTTCACTTT 13 V_IRF_Q6_M00772 TRANSFAC - 29909925 29909939 1.0E-06 TCTCCTTTCACTTTT 15 V_IRF_Q6_M00772 TRANSFAC + 29910146 29910160 2.0E-06 CGCAGTTTCTTTTCT 15 V_ISRE_01_M00258 TRANSFAC - 29909553 29909567 7.0E-06 AAGTTGCACTTTCCC 15 V_ISRE_01_M00258 TRANSFAC + 29910148 29910162 0.0E+00 CAGTTTCTTTTCTCC 15 V_TAL1BETAE47_01_M00065 TRANSFAC - 29905350 29905365 1.0E-06 ATGAACAGATGGCAAA 16 V_NFKAPPAB50_01_M00051 TRANSFAC + 29910114 29910123 8.0E-06 GGGGAGTCCC 10 V_NFKAPPAB50_01_M00051 TRANSFAC + 29910130 29910139 2.0E-06 GGGGATTCCC 10 V_BLIMP1_Q6_M01066 TRANSFAC + 29909923 29909938 1.0E-06 TGAAAAGTGAAAGGAG 16 V_ICSBP_Q6_M00699 TRANSFAC - 29910148 29910159 0.0E+00 GAAAAGAAACTG 12 V_NKX32_02_M01482 TRANSFAC - 29908910 29908926 3.0E-06 TTTCTCCACTTAAAACA 17 V_TAL1BETAITF2_01_M00070 TRANSFAC - 29905350 29905365 4.0E-06 ATGAACAGATGGCAAA 16 V_CAAT_01_M00254 TRANSFAC + 29910248 29910259 5.0E-06 AGAAGCCAATCA 12 V_ALPHACP1_01_M00687 TRANSFAC + 29910250 29910260 3.0E-06 AAGCCAATCAG 11 V_NFYC_Q5_M02107 TRANSFAC + 29910250 29910263 1.0E-06 AAGCCAATCAGTGT 14 V_FAC1_01_M00456 TRANSFAC + 29909770 29909783 9.0E-06 AACAACAACAACAA 14 V_FAC1_01_M00456 TRANSFAC + 29909773 29909786 0.0E+00 AACAACAACAAAAA 14 V_CEBPA_01_M00116 TRANSFAC - 29905267 29905280 1.0E-06 AAATTGCCTAATCT 14 V_DR1_Q3_M00762 TRANSFAC - 29910914 29910926 8.0E-06 GGGGCAAGGGTCT 13 V_TAL1ALPHAE47_01_M00066 TRANSFAC - 29905350 29905365 2.0E-06 ATGAACAGATGGCAAA 16 V_GATA3_02_M00350 TRANSFAC + 29909910 29909919 1.0E-05 AGAGATAATG 10 V_NFY_01_M00287 TRANSFAC + 29910248 29910263 8.0E-06 AGAAGCCAATCAGTGT 16 V_PBX1_02_M00124 TRANSFAC + 29905304 29905318 2.0E-06 ATCATCAATCAGAGT 15 V_PBX1_03_M01017 TRANSFAC + 29905305 29905316 3.0E-06 TCATCAATCAGA 12 V_PLZF_02_M01075 TRANSFAC - 29905398 29905426 3.0E-06 TTTTTTTTCATGTAAATTTGCTTAAGTTC 29 V_SREBP_Q3_M00776 TRANSFAC - 29909836 29909847 3.0E-06 AAAATCACCCCA 12 V_IRF1_Q6_01_M01881 TRANSFAC - 29909924 29909937 1.0E-06 TCCTTTCACTTTTC 14 V_TBX22_01_M01195 TRANSFAC + 29905229 29905247 3.0E-06 AAGTATGAGATTCTCATTT 2 V_PBX_Q3_M00998 TRANSFAC - 29905302 29905313 2.0E-06 GATTGATGATAG 12 V_NFKAPPAB_01_M00054 TRANSFAC + 29910130 29910139 9.0E-06 GGGGATTCCC 10 V_SRF_06_M02916 TRANSFAC - 29913210 29913226 3.0E-06 TATAGAAAAAAATATTC 17 V_SRF_06_M02916 TRANSFAC - 29913211 29913227 3.0E-06 CTATAGAAAAAAATATT 17 V_SRF_06_M02916 TRANSFAC - 29913212 29913228 6.0E-06 ACTATAGAAAAAAATAT 17 V_HSF2_02_M01244 TRANSFAC - 29909850 29909862 4.0E-06 GACTCTTCTAGAA 13 V_ZIC3_04_M02837 TRANSFAC + 29910979 29910993 4.0E-06 TCCCCCCGGGTTGGT 15 V_IRF1_01_M00062 TRANSFAC + 29909924 29909936 1.0E-06 GAAAAGTGAAAGG 13 V_PAX4_02_M00377 TRANSFAC - 29905273 29905283 9.0E-06 AAAAAATTGCC 11 V_PIT1_Q6_M00802 TRANSFAC - 29913197 29913214 1.0E-06 TATTCATGAACAAATTCA 18 V_CEBP_Q2_01_M00912 TRANSFAC - 29905267 29905278 4.0E-06 ATTGCCTAATCT 12 V_MAFK_04_M02880 TRANSFAC - 29905270 29905284 4.0E-06 AAAAAAATTGCCTAA 15 V_IRXB3_01_M01377 TRANSFAC - 29913200 29913216 9.0E-06 AATATTCATGAACAAAT 17 V_TCF3_05_M02920 TRANSFAC - 29905276 29905290 9.0E-06 GTGCAGAAAAAAATT 15 V_COUP_DR1_Q6_M00765 TRANSFAC + 29910914 29910926 5.0E-06 AGACCCTTGCCCC 13 V_ZIC2_04_M02836 TRANSFAC + 29910979 29910993 3.0E-06 TCCCCCCGGGTTGGT 15 V_DMRT1_01_M01146 TRANSFAC + 29909446 29909460 1.0E-06 TGGCTACTTTGTATT 15 V_CEBPG_Q6_01_M01869 TRANSFAC + 29905268 29905279 6.0E-06 GATTAGGCAATT 12 V_PAX4_04_M00380 TRANSFAC + 29909767 29909796 0.0E+00 AAAAACAACAACAACAAAAATCTACACCTC 30 V_PAX4_04_M00380 TRANSFAC - 29913193 29913222 2.0E-06 GAAAAAAATATTCATGAACAAATTCATATC 30 V_CEBPA_Q6_M01866 TRANSFAC + 29905267 29905279 9.0E-06 AGATTAGGCAATT 13 V_HSF1_Q6_01_M02017 TRANSFAC - 29909849 29909862 8.0E-06 GACTCTTCTAGAAG 14

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