TFBS - View Gene

VSX1

Entrez	Description	Chrom.	Strand	Promoter (Start - Stop)	TSS	Motifs
30813	visual system homeobox 1	chr20	-	25062515 - 25068015	25063015	VSX1_homeodomain_full_monomeric_11_1 Vsx1_homeodomain_DBD_monomeric_8_1 V_VSX1_01_M01335

Motif	Source	Strand	Start	Stop	PValue	Match Sequence	Overlap w/ Footprints
Zfp423_MA0116.1	JASPAR	-	25061806	25061820	9.0E-06	CGCCCCTTGGGGTGC	15
FIGLA_bHLH_DBD_dimeric_10_1	SELEX	-	25062060	25062069	7.0E-06	ACCACCTGGT	10
PBX1_MA0070.1	JASPAR	+	25061860	25061871	1.0E-05	CCGTCAATCATT	12
V_GEN_INI_B_M00315	TRANSFAC	-	25058132	25058139	1.0E-05	CCTCATTT	8
V_NRSF_Q4_M01028	TRANSFAC	-	25061740	25061758	4.0E-06	TCCCAGTCCCCTGTGCAGG	19
V_HFH4_01_M00742	TRANSFAC	-	25064219	25064231	3.0E-06	AAGTGATTGTTTT	13
V_GEN_INI3_B_M00314	TRANSFAC	-	25058132	25058139	1.0E-05	CCTCATTT	8
V_HNF1_Q6_01_M01011	TRANSFAC	-	25058157	25058177	2.0E-06	TTTAATTAATAACAAAGCTTG	21
V_PBX1_05_M01967	TRANSFAC	-	25061858	25061871	2.0E-06	AATGATTGACGGGT	14
V_OCT4_02_M01124	TRANSFAC	-	25064212	25064226	1.0E-06	ATTGTTTTGGTAATC	15
V_GFI1_Q6_M01067	TRANSFAC	-	25062111	25062123	8.0E-06	CTAAATCCCTGCC	13
V_MYOD_Q6_01_M00929	TRANSFAC	+	25062056	25062073	8.0E-06	CGGAACCAGGTGGTGGCG	18
V_HNF1_01_M00132	TRANSFAC	-	25064782	25064796	8.0E-06	GGTTAATAAGTCCCA	15
V_FOXL1_02_M02857	TRANSFAC	+	25064214	25064229	7.0E-06	TTACCAAAACAATCAC	16
V_FOXJ3_06_M02855	TRANSFAC	+	25064213	25064229	2.0E-06	ATTACCAAAACAATCAC	17
V_GEN_INI2_B_M00313	TRANSFAC	-	25058132	25058139	1.0E-05	CCTCATTT	8
V_BDP1_01_M01796	TRANSFAC	+	25058486	25058497	9.0E-06	GGTTTTGAAACC	12
V_HNF1A_Q5_M02013	TRANSFAC	-	25064786	25064796	3.0E-06	GGTTAATAAGT	11
V_PPARG_02_M00515	TRANSFAC	+	25058395	25058417	3.0E-06	CAGTGGCGCACCATGGCCCCGTA	23
V_ARP1_01_M00155	TRANSFAC	+	25058483	25058498	3.0E-06	TGCGGTTTTGAAACCA	16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the in the .