Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

HCRTR1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
3061 hypocretin (orexin) receptor 1 chr1 +32078300 - 32083800 32083300

Transcription Factor Binding Sites

 
Download all TFBS in the HCRTR1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 32080101 32080118 0.0E+00 CCAATTACATTCCAATTA 18
MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 32080102 32080119 2.0E-06 GTAATTGGAATGTAATTG 18
BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 32080102 32080118 0.0E+00 CAATTACATTCCAATTA 17
Zfp423_MA0116.1 JASPAR - 32083946 32083960 9.0E-06 GGCCCCTTTGGGTCC 15
TEAD1_TEA_full_monomeric_10_1 SELEX + 32080106 32080115 3.0E-06 TACATTCCAA 10
PROP1_homeodomain_full_dimeric_11_1 SELEX + 32080097 32080107 8.0E-06 AAACCCAATTA 11
SP1_MA0079.2 JASPAR - 32083837 32083846 9.0E-06 CCCCTCCTCC 10
PHOX2B_homeodomain_full_dimeric_11_1 SELEX + 32080097 32080107 7.0E-06 AAACCCAATTA 11
Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 32080101 32080118 0.0E+00 CCAATTACATTCCAATTA 18
Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 32080102 32080119 2.0E-06 GTAATTGGAATGTAATTG 18
TEAD3_TEA_DBD_monomeric_8_1 SELEX + 32080107 32080114 1.0E-05 ACATTCCA 8
PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX + 32080097 32080107 8.0E-06 AAACCCAATTA 11
TEAD4_TEA_DBD_monomeric_10_1 SELEX + 32080106 32080115 8.0E-06 TACATTCCAA 10
MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 32080101 32080118 0.0E+00 CCAATTACATTCCAATTA 18
MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 32080102 32080119 2.0E-06 GTAATTGGAATGTAATTG 18
V_KLF15_Q2_M01714 TRANSFAC + 32083838 32083851 4.0E-06 GAGGAGGGGAGGGG 14
V_MSX3_01_M01341 TRANSFAC + 32080096 32080111 9.0E-06 GAAACCCAATTACATT 16
V_SMAD3_Q6_01_M01888 TRANSFAC + 32080129 32080141 5.0E-06 AGCCAGACAGAGG 13
V_DR4_Q2_M00965 TRANSFAC - 32080138 32080154 3.0E-06 TGACTTACAGTAACCTC 17
V_ZTA_Q2_M00711 TRANSFAC - 32078736 32078748 5.0E-06 TTATTTTGACACA 13
V_PLAG1_02_M01973 TRANSFAC - 32083955 32083970 0.0E+00 CCCCCTAAGAGGCCCC 16
V_SP1_03_M02281 TRANSFAC - 32083837 32083846 9.0E-06 CCCCTCCTCC 10
V_SP1_02_M01303 TRANSFAC + 32083848 32083858 3.0E-06 GGGGCGGGGAG 11
V_GC_01_M00255 TRANSFAC - 32078699 32078712 6.0E-06 AAGAGGAGGGGCCT 14
V_CMYC_01_M01145 TRANSFAC + 32080059 32080070 8.0E-06 ATCCACGTGCCC 12
V_MAZ_Q6_01_M02023 TRANSFAC + 32083837 32083850 0.0E+00 GGAGGAGGGGAGGG 14
V_OCT4_02_M01124 TRANSFAC - 32080084 32080098 2.0E-06 TTCCTCTTGCTAATG 15
V_SMAD_Q6_01_M00974 TRANSFAC + 32080128 32080138 0.0E+00 TAGCCAGACAG 11
V_SOX15_04_M02903 TRANSFAC - 32080100 32080114 5.0E-06 TGGAATGTAATTGGG 15
V_SP1_Q2_01_M00933 TRANSFAC - 32083847 32083856 7.0E-06 CCCCGCCCCT 10
V_LHX4_01_M01421 TRANSFAC - 32080096 32080112 4.0E-06 GAATGTAATTGGGTTTC 17
V_TCF11MAFG_01_M00284 TRANSFAC - 32081313 32081334 6.0E-06 GTTCTGTGAGTGTGCATATGTG 22
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL