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HCRT


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
3060 hypocretin (orexin) neuropeptide precursor chr17 -40336970 - 40342470 40337470

Transcription Factor Binding Sites

 
Download all TFBS in the HCRT promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
NFE2_bZIP_DBD_dimeric_11_1 SELEX + 40335334 40335344 1.0E-06 GATGACTCATT 11
NFE2_bZIP_DBD_dimeric_11_1 SELEX - 40335334 40335344 1.0E-06 AATGAGTCATC 11
CTCF_MA0139.1 JASPAR + 40336309 40336327 1.0E-06 TGGCCTGCAGGAGGCGCTG 19
Creb3l2_bZIP_DBD_dimeric_12_1 SELEX + 40333212 40333223 3.0E-06 CGCCACGTGGCC 12
Creb3l2_bZIP_DBD_dimeric_12_1 SELEX - 40333212 40333223 9.0E-06 GGCCACGTGGCG 12
Zfp652_C2H2_DBD_monomeric_13_1 SELEX + 40333557 40333569 4.0E-06 AGCAAGGGTTAAG 13
EWSR1-FLI1_MA0149.1 JASPAR - 40335779 40335796 4.0E-06 GAAGGAAAGCAAGAAAGG 18
EWSR1-FLI1_MA0149.1 JASPAR - 40335780 40335797 2.0E-06 GGAAGGAAAGCAAGAAAG 18
EWSR1-FLI1_MA0149.1 JASPAR - 40336644 40336661 8.0E-06 GAAAGGAGTGCAGGCTTG 18
HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX + 40335214 40335229 9.0E-06 AAGTGCAAAGCCCGAT 16
SP4_C2H2_full_monomeric_17_1 SELEX - 40333352 40333368 1.0E-06 CAAGCCCCGCCCATCAT 17
SP4_C2H2_full_monomeric_17_1 SELEX + 40333394 40333410 5.0E-06 CTGGCCACGCCTCCACA 17
PRDM4_C2H2_full_monomeric_13_1 SELEX - 40333601 40333613 7.0E-06 TTTCAAGCCTTCC 13
ZNF282_C2H2_DBD_monomeric_17_1 SELEX - 40341014 40341030 1.0E-06 CTTTCCCCCAACATTCT 17
JDP2_bZIP_full_dimeric_9_1 SELEX + 40335335 40335343 2.0E-06 ATGACTCAT 9
JDP2_bZIP_full_dimeric_9_1 SELEX - 40335335 40335343 4.0E-06 ATGAGTCAT 9
Myf_MA0055.1 JASPAR + 40336511 40336522 4.0E-06 CAGCAGCAGCAG 12
CREB3L1_bZIP_full_dimeric_12_1 SELEX - 40333212 40333223 3.0E-06 GGCCACGTGGCG 12
Zfx_MA0146.1 JASPAR - 40336138 40336151 8.0E-06 CTGGCCCAGGCCTC 14
V_FOXP1_01_M00987 TRANSFAC + 40336087 40336106 8.0E-06 TCGTCTTTATTGCCTTTTTT 20
V_FOXP1_01_M00987 TRANSFAC + 40340779 40340798 5.0E-06 TTCTTTCTTTCTTTTATTTT 20
V_NFKB_C_M00208 TRANSFAC - 40335813 40335824 9.0E-06 GGGGACTTTACC 12
V_AP1_Q2_M00173 TRANSFAC + 40335334 40335344 8.0E-06 GATGACTCATT 11
V_USF_Q6_M00187 TRANSFAC + 40333213 40333222 9.0E-06 GCCACGTGGC 10
V_USF_Q6_M00187 TRANSFAC - 40333213 40333222 9.0E-06 GCCACGTGGC 10
V_NFKB_Q6_01_M00774 TRANSFAC + 40335916 40335931 9.0E-06 GCACTGGGAACTCCCC 16
V_AREB6_03_M00414 TRANSFAC + 40335879 40335890 1.0E-06 ATGCACCTGTGC 12
V_BACH2_01_M00490 TRANSFAC - 40335334 40335344 3.0E-06 AATGAGTCATC 11
V_NRSF_Q4_M01028 TRANSFAC - 40336504 40336522 4.0E-06 CTGCTGCTGCTGCTGCTGC 19
V_NRSF_Q4_M01028 TRANSFAC - 40336507 40336525 4.0E-06 CTACTGCTGCTGCTGCTGC 19
V_ZFX_01_M01593 TRANSFAC - 40336133 40336148 5.0E-06 GCCCAGGCCTCTGCCC 16
V_BCL6_01_M01183 TRANSFAC + 40340782 40340797 7.0E-06 TTTCTTTCTTTTATTT 16
V_HOXA13_02_M01297 TRANSFAC - 40340789 40340797 9.0E-06 AAATAAAAG 9
V_IK_Q5_M01169 TRANSFAC - 40335726 40335735 3.0E-06 TTTGGGAGGC 10
V_EVI1_02_M00079 TRANSFAC + 40335204 40335214 6.0E-06 CTACAAGATAA 11
V_P50RELAP65_Q5_01_M01224 TRANSFAC - 40341022 40341033 1.0E-05 GGACTTTCCCCC 12
V_GKLF_02_M01588 TRANSFAC - 40333354 40333365 3.0E-06 GCCCCGCCCATC 12
V_PITX2_Q6_M02114 TRANSFAC - 40335740 40335749 1.0E-06 TGTAATCCCA 10
V_LYF1_01_M00141 TRANSFAC - 40335727 40335735 9.0E-06 TTTGGGAGG 9
V_AP1_Q6_M00174 TRANSFAC + 40335334 40335344 0.0E+00 GATGACTCATT 11
V_BACH1_01_M00495 TRANSFAC - 40335332 40335346 2.0E-06 ACAATGAGTCATCCA 15
V_GC_01_M00255 TRANSFAC + 40333354 40333367 2.0E-06 GATGGGCGGGGCTT 14
V_MYF_01_M01302 TRANSFAC + 40336511 40336522 4.0E-06 CAGCAGCAGCAG 12
V_FKLF_Q5_M01837 TRANSFAC - 40335383 40335392 2.0E-06 GGGGTGGGAG 10
V_AP1_Q6_01_M00925 TRANSFAC + 40335335 40335343 4.0E-06 ATGACTCAT 9
V_SP1_Q6_M00196 TRANSFAC + 40333354 40333366 9.0E-06 GATGGGCGGGGCT 13
V_MAZ_Q6_01_M02023 TRANSFAC - 40332703 40332716 6.0E-06 AGGGGAGGAGGGGA 14
V_MAZ_Q6_01_M02023 TRANSFAC - 40333159 40333172 7.0E-06 GGAGGTGGGGGGGA 14
V_ISRE_01_M00258 TRANSFAC + 40340775 40340789 8.0E-06 CAGTTTCTTTCTTTC 15
V_JUNDM2_04_M02876 TRANSFAC + 40335331 40335346 3.0E-06 CTGGATGACTCATTGT 16
V_JUNDM2_04_M02876 TRANSFAC - 40335332 40335347 2.0E-06 AACAATGAGTCATCCA 16
V_HBP1_03_M02762 TRANSFAC + 40341196 40341211 6.0E-06 TACATGAATGAGTGGG 16
V_EVI1_Q3_M02002 TRANSFAC - 40335205 40335213 4.0E-06 TATCTTGTA 9
V_AP1_C_M00199 TRANSFAC - 40335335 40335343 8.0E-06 ATGAGTCAT 9
V_AP1_01_M00517 TRANSFAC - 40335333 40335345 1.0E-06 CAATGAGTCATCC 13
V_CTCF_01_M01200 TRANSFAC + 40336308 40336327 2.0E-06 CTGGCCTGCAGGAGGCGCTG 20
V_BLIMP1_Q6_M01066 TRANSFAC - 40335353 40335368 3.0E-06 AAGGCAGGGAATTTGA 16
V_BLIMP1_Q6_M01066 TRANSFAC - 40336709 40336724 1.0E-06 GGAGCAGGGAAAGTAG 16
V_AP1_Q2_01_M00924 TRANSFAC + 40335336 40335347 0.0E+00 TGACTCATTGTT 12
V_EVI1_06_M00011 TRANSFAC + 40335206 40335214 2.0E-06 ACAAGATAA 9
V_SOX17_04_M02904 TRANSFAC - 40341194 40341210 5.0E-06 CCACTCATTCATGTACT 17
V_GATA4_Q3_M00632 TRANSFAC - 40336097 40336108 1.0E-06 AGAAAAAAGGCA 12
V_GATA4_Q3_M00632 TRANSFAC - 40340786 40340797 7.0E-06 AAATAAAAGAAA 12
V_SP4_Q5_M01273 TRANSFAC - 40333229 40333239 7.0E-06 GCCCCTCCCCG 11
V_HBP1_04_M02866 TRANSFAC - 40333590 40333606 1.0E-06 CCTTCCCATTGTCCATT 17
V_AP1_Q4_01_M00926 TRANSFAC - 40335335 40335342 1.0E-05 TGAGTCAT 8
V_MTF1_06_M02882 TRANSFAC - 40340782 40340795 9.0E-06 ATAAAAGAAAGAAA 14
V_MYF6_04_M02885 TRANSFAC + 40333369 40333383 1.0E-06 AATAACAGACCCGCC 15
V_FOXL1_02_M02857 TRANSFAC - 40340788 40340803 8.0E-06 AGGCTAAAATAAAAGA 16
V_ZFP206_01_M01742 TRANSFAC + 40336259 40336269 8.0E-06 TGCGCCTGCGC 11
V_ZFP206_01_M01742 TRANSFAC - 40336260 40336270 4.0E-06 CGCGCAGGCGC 11
V_FRA1_Q5_M01267 TRANSFAC - 40335335 40335342 1.0E-05 TGAGTCAT 8
V_FPM315_01_M01587 TRANSFAC - 40332705 40332716 4.0E-06 AGGGGAGGAGGG 12
V_FPM315_01_M01587 TRANSFAC - 40333270 40333281 9.0E-06 CTGGGAGGAGGG 12
V_PITX2_Q2_M00482 TRANSFAC - 40335739 40335749 1.0E-06 TGTAATCCCAG 11
V_PLZF_02_M01075 TRANSFAC + 40333573 40333601 1.0E-05 CTAGTTTGCTGGTAGAGAATGGACAATGG 29
V_ETS1_B_M00339 TRANSFAC + 40341188 40341202 9.0E-06 GCAGGAAGTACATGA 15
V_EWSR1FLI1_01_M02252 TRANSFAC - 40335779 40335796 4.0E-06 GAAGGAAAGCAAGAAAGG 18
V_EWSR1FLI1_01_M02252 TRANSFAC - 40335780 40335797 2.0E-06 GGAAGGAAAGCAAGAAAG 18
V_EWSR1FLI1_01_M02252 TRANSFAC - 40336644 40336661 8.0E-06 GAAAGGAGTGCAGGCTTG 18
V_LPOLYA_B_M00318 TRANSFAC - 40336091 40336098 7.0E-06 CAATAAAG 8
V_SP1_Q4_01_M00932 TRANSFAC + 40333228 40333240 9.0E-06 ACGGGGAGGGGCC 13
V_SP1_Q4_01_M00932 TRANSFAC + 40333354 40333366 6.0E-06 GATGGGCGGGGCT 13
V_IRXB3_01_M01377 TRANSFAC + 40341192 40341208 9.0E-06 GAAGTACATGAATGAGT 17
V_TCF3_05_M02920 TRANSFAC - 40340789 40340803 0.0E+00 AGGCTAAAATAAAAG 15
V_PAX2_02_M00486 TRANSFAC - 40341259 40341267 5.0E-06 CATAAACTC 9
V_DMRT5_01_M01150 TRANSFAC + 40335264 40335278 2.0E-06 GACTGTAACTGTGTC 15
V_NANOG_02_M01247 TRANSFAC - 40340775 40340794 1.0E-06 TAAAAGAAAGAAAGAAACTG 20
V_NANOG_02_M01247 TRANSFAC - 40340779 40340798 1.0E-06 AAAATAAAAGAAAGAAAGAA 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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