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HBA1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
3039 hemoglobin, alpha 1 chr16 +221678 - 227178 226678

Transcription Factor Binding Sites

 
Download all TFBS in the HBA1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
CTCF_MA0139.1 JASPAR - 230401 230419 0.0E+00 CGGCCTCCAGGGGGCGCCG 19
NFIA_NFI_full_dimeric_15_1 SELEX - 224492 224506 9.0E-06 CTGGCTGAGAGCCAG 15
EWSR1-FLI1_MA0149.1 JASPAR + 227646 227663 1.0E-06 GGAGGGGATGGAGGAGGG 18
GATA5_GATA_DBD_monomeric_8_1 SELEX - 225057 225064 7.0E-06 AGATAAGA 8
GATA4_GATA_DBD_monomeric_8_1 SELEX - 225057 225064 7.0E-06 AGATAAGA 8
SP1_MA0079.2 JASPAR - 227643 227652 9.0E-06 CCCCTCCTCC 10
SP1_MA0079.2 JASPAR + 230599 230608 7.0E-06 CCCCGCCCCC 10
NFAT5_NFAT_DBD_dimeric_14_1 SELEX + 225008 225021 8.0E-06 CTGGAAAACAACAG 14
Gfi_MA0038.1 JASPAR - 225335 225344 7.0E-06 GAAATCACTG 10
SOX9_HMG_full_dimeric_16_3 SELEX + 225326 225341 5.0E-06 ATGACTTATCAGTGAT 16
SOX9_HMG_full_dimeric_16_3 SELEX - 225326 225341 4.0E-06 ATCACTGATAAGTCAT 16
CTCF_C2H2_full_monomeric_17_1 SELEX + 230402 230418 7.0E-06 GGCGCCCCCTGGAGGCC 17
CTCF_C2H2_full_monomeric_17_1 SELEX + 231571 231587 5.0E-06 AGCGCCCCCTCCCGGCG 17
Gata1_MA0035.2 JASPAR - 225056 225066 7.0E-06 AAAGATAAGAT 11
GATA3_GATA_full_monomeric_8_1 SELEX - 225057 225064 7.0E-06 AGATAAGA 8
IRF9_IRF_full_trimeric_15_1 SELEX + 225014 225028 6.0E-06 AACAACAGCGAAACT 15
IRF9_IRF_full_trimeric_15_1 SELEX + 228902 228916 6.0E-06 AACAAGAGCGAAACT 15
FEV_MA0156.1 JASPAR + 225320 225327 1.0E-05 CAGGAAAT 8
V_MEQ_01_M02049 TRANSFAC + 227587 227595 9.0E-06 GACACACAT 9
V_ZFP410_04_M02936 TRANSFAC - 227632 227648 9.0E-06 TCCTCCCGCCCCTGCCT 17
V_GATA2_02_M00348 TRANSFAC - 225057 225066 1.0E-06 AAAGATAAGA 10
V_EVI1_04_M00081 TRANSFAC - 225060 225074 1.0E-06 GAAAAAAAAAAGATA 15
V_FOXO4_02_M00476 TRANSFAC - 225008 225021 3.0E-06 CTGTTGTTTTCCAG 14
V_IK_Q5_M01169 TRANSFAC + 228845 228854 3.0E-06 TTTGGGAGGC 10
V_NFAT3_Q3_M01734 TRANSFAC + 225067 225076 6.0E-06 TTTTTTTCCT 10
V_SP1_03_M02281 TRANSFAC - 227643 227652 9.0E-06 CCCCTCCTCC 10
V_SP1_03_M02281 TRANSFAC + 230599 230608 7.0E-06 CCCCGCCCCC 10
V_GATA_C_M00203 TRANSFAC - 225326 225336 5.0E-06 TGATAAGTCAT 11
V_SPZ1_01_M00446 TRANSFAC + 227655 227669 1.0E-05 GGAGGAGGGAAAGTG 15
V_SP1_02_M01303 TRANSFAC - 230597 230607 8.0E-06 GGGGCGGGGGC 11
V_HEN1_01_M00068 TRANSFAC - 227572 227593 1.0E-06 GTGTGTCCCAGCTGCTGTCCAC 22
V_AP4_Q6_02_M01860 TRANSFAC - 227574 227586 8.0E-06 CCAGCTGCTGTCC 13
V_LYF1_01_M00141 TRANSFAC + 228845 228853 9.0E-06 TTTGGGAGG 9
V_TCFAP2E_04_M02926 TRANSFAC + 225031 225044 5.0E-06 GCCTCAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC + 225033 225046 2.0E-06 CTCAAAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC + 225034 225047 3.0E-06 TCAAAAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC + 225035 225048 9.0E-06 CAAAAAAAAAAAAG 14
V_TCFAP2E_04_M02926 TRANSFAC - 225064 225077 4.0E-06 AAGGAAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC - 225065 225078 4.0E-06 GAAGGAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC - 225066 225079 1.0E-06 TGAAGGAAAAAAAA 14
V_WT1_Q6_01_M02036 TRANSFAC + 230596 230605 4.0E-06 CGCCCCCGCC 10
V_ETS_Q4_M00771 TRANSFAC - 225320 225331 3.0E-06 AGTCATTTCCTG 12
V_ELF4_04_M02850 TRANSFAC + 225031 225047 3.0E-06 GCCTCAAAAAAAAAAAA 17
V_ELF4_04_M02850 TRANSFAC + 225032 225048 2.0E-06 CCTCAAAAAAAAAAAAG 17
V_ELF4_04_M02850 TRANSFAC + 225033 225049 2.0E-06 CTCAAAAAAAAAAAAGC 17
V_ELF4_04_M02850 TRANSFAC - 225059 225075 7.0E-06 GGAAAAAAAAAAGATAA 17
V_ROAZ_01_M00467 TRANSFAC - 227702 227715 4.0E-06 GCACTCTAGGGTCC 14
V_HELIOSA_02_M01004 TRANSFAC - 225069 225079 6.0E-06 TGAAGGAAAAA 11
V_ZFP105_03_M02827 TRANSFAC + 225033 225047 1.0E-06 CTCAAAAAAAAAAAA 15
V_ZFP105_03_M02827 TRANSFAC + 225034 225048 3.0E-06 TCAAAAAAAAAAAAG 15
V_ZFP105_03_M02827 TRANSFAC + 225036 225050 9.0E-06 AAAAAAAAAAAAGCC 15
V_ZFP105_03_M02827 TRANSFAC - 225061 225075 8.0E-06 GGAAAAAAAAAAGAT 15
V_POLY_C_M00212 TRANSFAC + 231156 231173 4.0E-06 GAGTAAAGCCTCTCCCAG 18
V_IRF2_01_M00063 TRANSFAC + 225016 225028 1.0E-05 CAACAGCGAAACT 13
V_IRF2_01_M00063 TRANSFAC + 228904 228916 1.0E-05 CAAGAGCGAAACT 13
V_KROX_Q6_M00982 TRANSFAC + 230594 230607 2.0E-06 GGCGCCCCCGCCCC 14
V_SP1_Q6_M00196 TRANSFAC - 230597 230609 6.0E-06 TGGGGGCGGGGGC 13
V_IRF3_Q3_M01279 TRANSFAC + 225066 225078 6.0E-06 TTTTTTTTCCTTC 13
V_MAZ_Q6_01_M02023 TRANSFAC + 227643 227656 9.0E-06 GGAGGAGGGGATGG 14
V_GATA1_09_M02254 TRANSFAC - 225056 225066 7.0E-06 AAAGATAAGAT 11
V_CTCF_02_M01259 TRANSFAC - 230403 230422 2.0E-06 CCGCGGCCTCCAGGGGGCGC 20
V_CTCF_01_M01200 TRANSFAC - 230401 230420 0.0E+00 GCGGCCTCCAGGGGGCGCCG 20
V_CTCF_01_M01200 TRANSFAC - 231570 231589 6.0E-06 CGCGCCGGGAGGGGGCGCTG 20
V_BLIMP1_Q6_M01066 TRANSFAC + 227655 227670 2.0E-06 GGAGGAGGGAAAGTGG 16
V_TFIII_Q6_M00706 TRANSFAC + 228303 228311 6.0E-06 AGAGGGAGG 9
V_NEUROD_02_M01288 TRANSFAC - 227574 227585 5.0E-06 CAGCTGCTGTCC 12
V_SP4_Q5_M01273 TRANSFAC + 230598 230608 5.0E-06 CCCCCGCCCCC 11
V_MTF1_06_M02882 TRANSFAC + 225036 225049 5.0E-06 AAAAAAAAAAAAGC 14
V_SIRT6_01_M01797 TRANSFAC - 225057 225064 7.0E-06 AGATAAGA 8
V_HEN1_02_M00058 TRANSFAC + 227572 227593 8.0E-06 GTGGACAGCAGCTGGGACACAC 22
V_HEN1_02_M00058 TRANSFAC - 227572 227593 3.0E-06 GTGTGTCCCAGCTGCTGTCCAC 22
V_GATA3_02_M00350 TRANSFAC - 225057 225066 1.0E-06 AAAGATAAGA 10
V_GATA6_01_M00462 TRANSFAC - 225057 225066 0.0E+00 AAAGATAAGA 10
V_ZFP206_01_M01742 TRANSFAC + 230438 230448 4.0E-06 CGCGCAGGCGC 11
V_ZFP206_01_M01742 TRANSFAC - 230439 230449 8.0E-06 TGCGCCTGCGC 11
V_NRF2_Q4_M00821 TRANSFAC - 225325 225337 3.0E-06 CTGATAAGTCATT 13
V_ETS1_B_M00339 TRANSFAC + 225319 225333 8.0E-06 CCAGGAAATGACTTA 15
V_ZFP281_01_M01597 TRANSFAC - 230599 230609 6.0E-06 TGGGGGCGGGG 11
V_GATA2_03_M00349 TRANSFAC - 225057 225066 2.0E-06 AAAGATAAGA 10
V_SRF_06_M02916 TRANSFAC + 225032 225048 1.0E-06 CCTCAAAAAAAAAAAAG 17
V_SRF_06_M02916 TRANSFAC + 225033 225049 1.0E-06 CTCAAAAAAAAAAAAGC 17
V_SRF_06_M02916 TRANSFAC + 225034 225050 1.0E-06 TCAAAAAAAAAAAAGCC 17
V_SRF_06_M02916 TRANSFAC + 225035 225051 2.0E-06 CAAAAAAAAAAAAGCCC 17
V_SRF_06_M02916 TRANSFAC - 225059 225075 2.0E-06 GGAAAAAAAAAAGATAA 17
V_SRF_06_M02916 TRANSFAC - 225060 225076 1.0E-06 AGGAAAAAAAAAAGATA 17
V_SRF_06_M02916 TRANSFAC - 225061 225077 1.0E-06 AAGGAAAAAAAAAAGAT 17
V_SRF_06_M02916 TRANSFAC - 225062 225078 2.0E-06 GAAGGAAAAAAAAAAGA 17
V_EWSR1FLI1_01_M02252 TRANSFAC + 227646 227663 1.0E-06 GGAGGGGATGGAGGAGGG 18
V_CTF1_01_M01196 TRANSFAC - 224492 224505 9.0E-06 TGGCTGAGAGCCAG 14
V_SP1_Q2_01_M00933 TRANSFAC + 230599 230608 4.0E-06 CCCCGCCCCC 10
V_GATA5_03_M02756 TRANSFAC - 225325 225341 9.0E-06 ATCACTGATAAGTCATT 17
V_GATA6_04_M02757 TRANSFAC - 225053 225069 0.0E+00 AAAAAAGATAAGATGTG 17
V_GFI1_Q6_01_M02010 TRANSFAC + 225335 225344 5.0E-06 CAGTGATTTC 10
V_TCF11MAFG_01_M00284 TRANSFAC + 225321 225342 5.0E-06 AGGAAATGACTTATCAGTGATT 22
V_TCF3_05_M02920 TRANSFAC - 225063 225077 2.0E-06 AAGGAAAAAAAAAAG 15
V_TCF3_05_M02920 TRANSFAC - 225064 225078 3.0E-06 GAAGGAAAAAAAAAA 15
TLX1_NFIC_MA0119.1 JASPAR - 224492 224505 9.0E-06 TGGCTGAGAGCCAG 14
V_FEV_01_M02269 TRANSFAC + 225320 225327 1.0E-05 CAGGAAAT 8
V_PAX4_04_M00380 TRANSFAC + 225036 225065 6.0E-06 AAAAAAAAAAAAGCCCCCACATCTTATCTT 30
V_GATA1_06_M00347 TRANSFAC - 225057 225066 4.0E-06 AAAGATAAGA 10
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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