Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

HARS


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
3035 histidyl-tRNA synthetase chr5 -140070812 - 140076312 140071312

Transcription Factor Binding Sites

 
Download all TFBS in the HARS promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
POU4F2_POU_full_monomeric_16_1 SELEX - 140070589 140070604 7.0E-06 AGGAATATTGAATGAA 16
GABPA_MA0062.2 JASPAR + 140071032 140071042 3.0E-06 CCGGAAGTGCC 11
EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 140074107 140074120 9.0E-06 GAATTAGCTAAGAA 14
FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 140074158 140074169 6.0E-06 AAAAAAAACAAT 12
ELF4_ETS_full_monomeric_12_1 SELEX + 140071029 140071040 5.0E-06 CTCCCGGAAGTG 12
BARHL2_homeodomain_full_dimeric_16_1 SELEX + 140074142 140074157 7.0E-06 TAATTTGTATTAAAAA 16
POU4F3_POU_DBD_monomeric_16_1 SELEX - 140070589 140070604 8.0E-06 AGGAATATTGAATGAA 16
Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 140074142 140074157 7.0E-06 TAATTTGTATTAAAAA 16
ELF3_ETS_full_monomeric_13_1 SELEX - 140070955 140070967 4.0E-06 TAGCCGGAAGTCA 13
ELF3_ETS_full_monomeric_13_1 SELEX - 140071016 140071028 6.0E-06 GAGCCGGAAATAA 13
znf143_MA0088.1 JASPAR + 140073982 140074001 8.0E-06 TTTCTCCCAGAAGGCAGTTC 20
Foxd3_MA0041.1 JASPAR + 140074157 140074168 0.0E+00 AATTGTTTTTTT 12
ELK1_MA0028.1 JASPAR - 140071019 140071028 5.0E-06 GAGCCGGAAA 10
ZBTB7C_C2H2_full_monomeric_12_1 SELEX - 140070926 140070937 8.0E-06 GCAACCACCGCA 12
EHF_ETS_full_monomeric_12_1 SELEX - 140070956 140070967 9.0E-06 TAGCCGGAAGTC 12
ELF3_ETS_DBD_monomeric_12_1 SELEX + 140071029 140071040 8.0E-06 CTCCCGGAAGTG 12
Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 140074160 140074172 9.0E-06 GCCAAAAAAAACA 13
ONECUT3_CUT_DBD_monomeric_14_1 SELEX - 140074155 140074168 1.0E-05 AAAAAAACAATTTT 14
V_TEL1_02_M02070 TRANSFAC + 140071031 140071040 5.0E-06 CCCGGAAGTG 10
V_DBX1_01_M01483 TRANSFAC - 140074145 140074161 2.0E-06 CAATTTTTTAATACAAA 17
V_DBX1_01_M01483 TRANSFAC - 140074149 140074165 5.0E-06 AAAACAATTTTTTAATA 17
V_FLI1_Q6_M01208 TRANSFAC - 140070954 140070964 2.0E-06 CCGGAAGTCAT 11
V_GABPA_02_M02074 TRANSFAC - 140071017 140071026 4.0E-06 GCCGGAAATA 10
V_SOX40_04_M02908 TRANSFAC - 140074045 140074060 7.0E-06 AAGGATTATGATACAC 16
V_MAX_Q6_M01830 TRANSFAC + 140074172 140074183 4.0E-06 CCAGACACGTGG 12
V_DMRT3_01_M01148 TRANSFAC - 140074143 140074157 4.0E-06 TTTTTAATACAAATT 15
V_HMGIY_Q3_M01010 TRANSFAC - 140074151 140074165 5.0E-06 AAAACAATTTTTTAA 15
V_FOXD3_01_M00130 TRANSFAC + 140074157 140074168 0.0E+00 AATTGTTTTTTT 12
V_NERF_01_M01976 TRANSFAC + 140071031 140071040 9.0E-06 CCCGGAAGTG 10
V_ESE1_01_M01977 TRANSFAC - 140071017 140071026 6.0E-06 GCCGGAAATA 10
V_GABP_B_M00341 TRANSFAC + 140071031 140071042 7.0E-06 CCCGGAAGTGCC 12
V_FOXO3A_Q1_M01137 TRANSFAC - 140074156 140074167 8.0E-06 AAAAAACAATTT 12
V_SOX11_04_M02899 TRANSFAC + 140074155 140074168 0.0E+00 AAAATTGTTTTTTT 14
V_HNF3_Q6_01_M01012 TRANSFAC + 140074155 140074172 8.0E-06 AAAATTGTTTTTTTTGGC 18
V_NKX62_Q2_M00489 TRANSFAC - 140071011 140071022 4.0E-06 GAAATAATTTTT 12
V_ELF2_02_M02054 TRANSFAC + 140071031 140071040 8.0E-06 CCCGGAAGTG 10
V_ELF4_04_M02850 TRANSFAC - 140074157 140074173 4.0E-06 GGCCAAAAAAAACAATT 17
V_ELF4_04_M02850 TRANSFAC - 140074158 140074174 7.0E-06 TGGCCAAAAAAAACAAT 17
V_SOX13_03_M02797 TRANSFAC - 140074153 140074168 0.0E+00 AAAAAAACAATTTTTT 16
V_SOX7_03_M02807 TRANSFAC - 140074149 140074170 0.0E+00 CAAAAAAAACAATTTTTTAATA 22
V_ZFP105_03_M02827 TRANSFAC - 140074156 140074170 2.0E-06 CAAAAAAAACAATTT 15
V_CART1_01_M00416 TRANSFAC + 140074139 140074156 1.0E-06 CAATAATTTGTATTAAAA 18
V_MAZ_Q6_01_M02023 TRANSFAC - 140070567 140070580 4.0E-06 GAGGGAGGAGAGTG 14
V_HNF3_Q6_M00791 TRANSFAC - 140074158 140074170 8.0E-06 CAAAAAAAACAAT 13
V_SOX18_03_M02801 TRANSFAC + 140074154 140074169 4.0E-06 AAAAATTGTTTTTTTT 16
V_NKX52_01_M01315 TRANSFAC - 140074150 140074166 5.0E-06 AAAAACAATTTTTTAAT 17
V_HOX13_01_M00023 TRANSFAC - 140074129 140074158 5.0E-06 TTTTTTAATACAAATTATTGAGCCCCATTC 30
V_OCT1_04_M00138 TRANSFAC - 140074137 140074159 4.0E-06 ATTTTTTAATACAAATTATTGAG 23
V_HBP1_03_M02762 TRANSFAC - 140070585 140070600 0.0E+00 ATATTGAATGAATGGC 16
V_AHRARNT_02_M00237 TRANSFAC - 140070829 140070847 1.0E-06 GGAGAGCGCGTGCGAGGCC 19
V_PAX8_01_M00717 TRANSFAC - 140070588 140070602 1.0E-06 GAATATTGAATGAAT 15
V_ELK1_02_M00025 TRANSFAC - 140070955 140070968 7.0E-06 ATAGCCGGAAGTCA 14
V_NCX_02_M01420 TRANSFAC - 140074145 140074161 4.0E-06 CAATTTTTTAATACAAA 17
V_POU6F1_01_M00465 TRANSFAC + 140071009 140071019 2.0E-06 ACAAAAATTAT 11
V_TEL1_01_M01993 TRANSFAC + 140071031 140071040 5.0E-06 CCCGGAAGTG 10
V_ELF4_01_M01979 TRANSFAC + 140071031 140071040 4.0E-06 CCCGGAAGTG 10
V_CETS1P54_03_M01078 TRANSFAC - 140071014 140071029 9.0E-06 GGAGCCGGAAATAATT 16
V_ZFP105_04_M02931 TRANSFAC + 140074133 140074149 1.0E-06 GGGGCTCAATAATTTGT 17
V_SOX15_03_M02799 TRANSFAC - 140074152 140074168 5.0E-06 AAAAAAACAATTTTTTA 17
V_EHF_06_M02745 TRANSFAC - 140070955 140070969 1.0E-05 GATAGCCGGAAGTCA 15
V_EHF_06_M02745 TRANSFAC - 140071016 140071030 1.0E-06 AGGAGCCGGAAATAA 15
V_GATA3_02_M00350 TRANSFAC - 140071355 140071364 7.0E-06 AGAGATAATT 10
V_TCF7_04_M02921 TRANSFAC - 140074142 140074156 4.0E-06 TTTTAATACAAATTA 15
V_TCF7_04_M02921 TRANSFAC + 140074146 140074160 0.0E+00 TTGTATTAAAAAATT 15
V_MECP2_02_M01299 TRANSFAC - 140071016 140071025 7.0E-06 CCGGAAATAA 10
V_SMAD_Q6_01_M00974 TRANSFAC + 140074169 140074179 7.0E-06 TGGCCAGACAC 11
V_SOX8_03_M02808 TRANSFAC + 140074152 140074168 0.0E+00 TAAAAAATTGTTTTTTT 17
V_SRF_06_M02916 TRANSFAC - 140074155 140074171 8.0E-06 CCAAAAAAAACAATTTT 17
V_SRF_06_M02916 TRANSFAC - 140074156 140074172 2.0E-06 GCCAAAAAAAACAATTT 17
V_SRF_06_M02916 TRANSFAC - 140074157 140074173 7.0E-06 GGCCAAAAAAAACAATT 17
V_VDR_Q3_M00444 TRANSFAC - 140070570 140070584 2.0E-06 GGGGGAGGGAGGAGA 15
V_SOX1_03_M02802 TRANSFAC + 140070587 140070602 6.0E-06 CATTCATTCAATATTC 16
V_SOX1_03_M02802 TRANSFAC - 140074141 140074156 1.0E-05 TTTTAATACAAATTAT 16
V_HOMEZ_01_M01429 TRANSFAC + 140074153 140074169 2.0E-06 AAAAAATTGTTTTTTTT 17
V_FOXO1_01_M00473 TRANSFAC - 140074158 140074167 3.0E-06 AAAAAACAAT 10
V_ELF_02_M02053 TRANSFAC + 140071031 140071040 1.0E-05 CCCGGAAGTG 10
V_BARHL2_01_M01446 TRANSFAC - 140074152 140074167 7.0E-06 AAAAAACAATTTTTTA 16
V_SOX12_03_M02796 TRANSFAC + 140074156 140074169 4.0E-06 AAATTGTTTTTTTT 14
V_SRY_05_M02917 TRANSFAC - 140074153 140074169 6.0E-06 AAAAAAAACAATTTTTT 17
V_FOXO4_01_M00472 TRANSFAC - 140074156 140074166 3.0E-06 AAAAACAATTT 11
V_HMX3_02_M01413 TRANSFAC - 140074150 140074166 7.0E-06 AAAAACAATTTTTTAAT 17
V_SOX5_07_M02909 TRANSFAC + 140074152 140074168 1.0E-06 TAAAAAATTGTTTTTTT 17
V_TCF3_05_M02920 TRANSFAC - 140074159 140074173 8.0E-06 GGCCAAAAAAAACAA 15
V_TCF3_05_M02920 TRANSFAC - 140074160 140074174 5.0E-06 TGGCCAAAAAAAACA 15
V_GLIS2_04_M02863 TRANSFAC + 140074147 140074160 3.0E-06 TGTATTAAAAAATT 14
V_ARID5A_04_M02840 TRANSFAC - 140074141 140074157 5.0E-06 TTTTTAATACAAATTAT 17
V_ELF4_02_M02056 TRANSFAC - 140071017 140071026 4.0E-06 GCCGGAAATA 10
V_OCT4_01_M01125 TRANSFAC - 140074144 140074158 4.0E-06 TTTTTTAATACAAAT 15
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL