Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

TBX21 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS Motifs 30009 T-box 21 chr17 + 45805609 - 45811109 45810609 TBX21_TBX_full_monomeric_10_1 TBX21_TBX_full_dimeric_19_1 TBX21_TBX_full_dimeric_16_1 Transcription Factor Binding Sites   Download all TFBS in the TBX21 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 45810498 45810516 3.0E-06 TAGCCACGAGAGGGCGGGG 19 Zfp423_MA0116.1 JASPAR - 45810444 45810458 5.0E-06 GCCCCCCATGGTGGA 15 IRF8_IRF_full_dimeric_14_1 SELEX + 45812304 45812317 8.0E-06 AAGAAACAGAAACC 14 FOXL1_forkhead_full_dimeric_13_1 SELEX - 45812331 45812343 7.0E-06 ACTAAACAAATAC 13 Esrrb_MA0141.1 JASPAR + 45812913 45812924 6.0E-06 CTTCCAAGGTCA 12 MAFF_bZIP_DBD_dimeric_15_1 SELEX + 45812335 45812349 5.0E-06 TTGTTTAGTAAGCAA 15 MAFF_bZIP_DBD_dimeric_15_1 SELEX - 45812335 45812349 3.0E-06 TTGCTTACTAAACAA 15 Sox1_HMG_DBD_dimeric_13_1 SELEX + 45813064 45813076 7.0E-06 TCACTTCCATTAT 13 IRF1_MA0050.1 JASPAR - 45813060 45813071 7.0E-06 GGAAGTGAAAGC 12 Foxc1_forkhead_DBD_dimeric_11_1 SELEX - 45812332 45812342 7.0E-06 CTAAACAAATA 11 SP1_MA0079.2 JASPAR + 45810722 45810731 7.0E-06 CCCCGCCCCC 10 FOXI1_MA0042.1 JASPAR + 45812329 45812340 1.0E-06 TGGTATTTGTTT 12 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 45812332 45812342 4.0E-06 CTAAACAAATA 11 MAFK_bZIP_DBD_dimeric_21_1 SELEX - 45812332 45812352 6.0E-06 GGGTTGCTTACTAAACAAATA 21 IRF9_IRF_full_trimeric_15_1 SELEX + 45812303 45812317 0.0E+00 AAAGAAACAGAAACC 15 Esrra_nuclearreceptor_DBD_monomeric_11_1 SELEX + 45812915 45812925 7.0E-06 TCCAAGGTCAC 11 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 45813058 45813072 6.0E-06 TGGAAGTGAAAGCAC 15 ESRRB_nuclearreceptor_DBD_monomeric_11_1 SELEX + 45812916 45812926 6.0E-06 CCAAGGTCACA 11 IRF4_IRF_full_dimeric_15_1 SELEX + 45812304 45812318 7.0E-06 AAGAAACAGAAACCT 15 IRF3_IRF_full_trimeric_21_1 SELEX + 45812298 45812318 1.0E-06 CAAGGAAAGAAACAGAAACCT 21 PLAG1_MA0163.1 JASPAR - 45812996 45813009 6.0E-06 GTGGCCGTAGGGGG 14 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 45812332 45812344 9.0E-06 TACTAAACAAATA 13 RREB1_MA0073.1 JASPAR - 45811986 45812005 4.0E-06 CCCCCATACACACACACCCA 20 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 45812329 45812342 7.0E-06 CTAAACAAATACCA 14 V_HNF3B_01_M00131 TRANSFAC + 45812327 45812341 3.0E-06 TGTGGTATTTGTTTA 15 V_HSF1_Q6_M01023 TRANSFAC - 45810383 45810399 9.0E-06 TTTCTGGGAGTGTCAGC 17 V_SOX30_03_M02804 TRANSFAC - 45813066 45813081 9.0E-06 GTGAAATAATGGAAGT 16 V_MTF1_Q4_M00650 TRANSFAC - 45812376 45812389 8.0E-06 GGTGCGCACAGCCC 14 V_LRH1_Q5_01_M02098 TRANSFAC + 45812914 45812924 3.0E-06 TTCCAAGGTCA 11 V_IRF_Q6_01_M00972 TRANSFAC + 45812306 45812316 6.0E-06 GAAACAGAAAC 11 V_IRF_Q6_01_M00972 TRANSFAC - 45813061 45813071 4.0E-06 GGAAGTGAAAG 11 V_IRF2_Q6_M01882 TRANSFAC - 45813058 45813073 2.0E-06 ATGGAAGTGAAAGCAC 16 V_FOXO3A_Q1_M01137 TRANSFAC - 45812332 45812343 6.0E-06 ACTAAACAAATA 12 V_IRF3_05_M02767 TRANSFAC - 45811882 45811895 3.0E-06 CGGAAAGGAAACTT 14 V_HNF3_Q6_01_M01012 TRANSFAC + 45812327 45812344 9.0E-06 TGTGGTATTTGTTTAGTA 18 V_HNF3_Q6_01_M01012 TRANSFAC + 45812966 45812983 9.0E-06 GATAGTATTTGCTTGGGT 18 V_SP1_03_M02281 TRANSFAC + 45810722 45810731 7.0E-06 CCCCGCCCCC 10 V_AREB6_04_M00415 TRANSFAC - 45812304 45812312 8.0E-06 CTGTTTCTT 9 V_XFD3_01_M00269 TRANSFAC - 45812332 45812345 9.0E-06 TTACTAAACAAATA 14 V_SP4_03_M02810 TRANSFAC + 45810720 45810736 8.0E-06 TCCCCCGCCCCCTGCTC 17 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 45812332 45812342 1.0E-06 TATTTGTTTAG 11 V_EGR1_Q6_M01873 TRANSFAC + 45810966 45810975 4.0E-06 GCGGGGGCGG 10 V_ISRE_01_M00258 TRANSFAC + 45811882 45811896 4.0E-06 AAGTTTCCTTTCCGG 15 V_ISRE_01_M00258 TRANSFAC - 45812304 45812318 5.0E-06 AGGTTTCTGTTTCTT 15 V_SP1SP3_Q4_M01219 TRANSFAC + 45810724 45810734 8.0E-06 CCGCCCCCTGC 11 V_CTCF_02_M01259 TRANSFAC + 45810495 45810514 0.0E+00 TATTAGCCACGAGAGGGCGG 20 V_CTCF_01_M01200 TRANSFAC + 45810497 45810516 1.0E-06 TTAGCCACGAGAGGGCGGGG 20 V_ICSBP_Q6_M00699 TRANSFAC - 45813059 45813070 5.0E-06 GAAGTGAAAGCA 12 V_FOXO1_Q5_M01216 TRANSFAC - 45811372 45811380 1.0E-05 AAAAACAGA 9 V_SF1_Q6_01_M01132 TRANSFAC - 45812916 45812924 7.0E-06 TGACCTTGG 9 V_SP4_Q5_M01273 TRANSFAC + 45810721 45810731 5.0E-06 CCCCCGCCCCC 11 V_TAL1_01_M01591 TRANSFAC + 45810434 45810446 7.0E-06 CTCGCTTCTCTCC 13 V_ERR2_01_M01589 TRANSFAC + 45812916 45812927 2.0E-06 CCAAGGTCACAC 12 V_FOXO3_01_M00477 TRANSFAC + 45812332 45812345 3.0E-06 TATTTGTTTAGTAA 14 V_ESRRA_03_M02748 TRANSFAC + 45812913 45812929 5.0E-06 CTTCCAAGGTCACACAA 17 V_IRF1_Q6_01_M01881 TRANSFAC - 45812305 45812318 4.0E-06 AGGTTTCTGTTTCT 14 V_IRF1_Q6_01_M01881 TRANSFAC + 45813059 45813072 7.0E-06 TGCTTTCACTTCCA 14 V_HFH3_01_M00289 TRANSFAC + 45812329 45812341 0.0E+00 TGGTATTTGTTTA 13 V_FOXJ2_01_M00422 TRANSFAC - 45812327 45812344 0.0E+00 TACTAAACAAATACCACA 18 V_NFE2_Q6_M02104 TRANSFAC - 45810838 45810853 5.0E-06 CATGTCTCCGCAACCC 16 V_FOXO1_01_M00473 TRANSFAC - 45812334 45812343 9.0E-06 ACTAAACAAA 10 V_SP1_Q2_01_M00933 TRANSFAC + 45810722 45810731 4.0E-06 CCCCGCCCCC 10 V_SP1_Q4_01_M00932 TRANSFAC + 45810506 45810518 8.0E-06 AGAGGGCGGGGTG 13 V_SEF1_C_M00214 TRANSFAC - 45811059 45811077 4.0E-06 AAGCCGGCCGCCTGGGGTC 19

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.