Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

EFEMP2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 30008 EGF containing fibulin-like extracellular matrix protein 2 chr11 - 65639905 - 65645405 65640405 Transcription Factor Binding Sites   Download all TFBS in the EFEMP2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SP8_C2H2_DBD_monomeric_12_1 SELEX - 65641093 65641104 6.0E-06 GACACGCCCCCA 12 Foxk1_forkhead_DBD_putatively-multimeric_11_1 SELEX + 65637964 65637974 9.0E-06 GGGACACAAAG 11 ESRRA_nuclearreceptor_DBD_dimeric_19_1 SELEX - 65641225 65641243 3.0E-06 CAAGGGGAAAGGAAGGGCG 19 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 65641094 65641104 2.0E-06 GACACGCCCCC 11 KLF14_C2H2_DBD_monomeric_14_1 SELEX - 65641092 65641105 4.0E-06 GGACACGCCCCCAC 14 EWSR1-FLI1_MA0149.1 JASPAR - 65640831 65640848 5.0E-06 GGGTGGAGGGCAGGAGGG 18 NFKB1_MA0105.1 JASPAR + 65641204 65641214 3.0E-06 GGGGATCCCCC 11 NFKB1_MA0105.1 JASPAR - 65641204 65641214 4.0E-06 GGGGGATCCCC 11 STAT1_MA0137.2 JASPAR - 65639484 65639498 9.0E-06 CCCTTCCAGGAATGC 15 KLF13_C2H2_full_monomeric_18_1 SELEX - 65641089 65641106 3.0E-06 AGGACACGCCCCCACTTC 18 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX - 65640211 65640222 7.0E-06 TGCCCGCAGGCA 12 Sox17_HMG_DBD_dimeric_15_2 SELEX - 65635631 65635645 4.0E-06 ATGAAAACCAGTCAC 15 RUNX2_RUNX_DBD_dimeric_18_1 SELEX + 65638269 65638286 0.0E+00 TAACCTCTAAAACCACAT 18 SOX2_HMG_full_dimeric_15_1 SELEX - 65635631 65635645 6.0E-06 ATGAAAACCAGTCAC 15 znf143_MA0088.1 JASPAR + 65635655 65635674 7.0E-06 TGATTCCCATCATCCCTCAG 20 SP4_C2H2_full_monomeric_17_1 SELEX - 65641091 65641107 2.0E-06 AAGGACACGCCCCCACT 17 SP4_C2H2_full_monomeric_17_1 SELEX - 65641115 65641131 5.0E-06 CCAGCCCCGCCCATACT 17 SP4_C2H2_full_monomeric_17_1 SELEX - 65641137 65641153 8.0E-06 GAGGCCACGCCCTTCCT 17 SOX14_HMG_DBD_dimeric_15_1 SELEX - 65635631 65635645 1.0E-06 ATGAAAACCAGTCAC 15 ZNF143_C2H2_DBD_monomeric_16_1 SELEX + 65635658 65635673 4.0E-06 TTCCCATCATCCCTCA 16 NFKB1_NFAT_DBD_dimeric_13_1 SELEX + 65641203 65641215 3.0E-06 CGGGGATCCCCCG 13 NFKB1_NFAT_DBD_dimeric_13_1 SELEX - 65641203 65641215 3.0E-06 CGGGGGATCCCCG 13 LHX9_homeodomain_DBD_dimeric_13_1 SELEX + 65641423 65641435 7.0E-06 TAATAGCTCTTTA 13 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 65641137 65641151 0.0E+00 GGCCACGCCCTTCCT 15 Stat3_MA0144.1 JASPAR + 65639487 65639496 2.0E-06 TTCCTGGAAG 10 FEV_MA0156.1 JASPAR + 65638300 65638307 1.0E-05 CAGGAAAT 8 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX - 65640211 65640222 2.0E-06 TGCCCGCAGGCA 12 BATF3_bZIP_DBD_dimeric_14_1 SELEX + 65638730 65638743 3.0E-06 TGATGACGGCAGCG 14 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX - 65640211 65640222 3.0E-06 TGCCCGCAGGCA 12 NFIA_NFI_full_monomeric_10_1 SELEX - 65640950 65640959 9.0E-06 TGTGCCAAAA 10 Sox1_HMG_DBD_dimeric_15_2 SELEX - 65635631 65635645 8.0E-06 ATGAAAACCAGTCAC 15 HNF1A_MA0046.1 JASPAR + 65641416 65641429 7.0E-06 GGTTAAATAATAGC 14 RUNX3_RUNX_DBD_dimeric_18_1 SELEX + 65638269 65638286 1.0E-06 TAACCTCTAAAACCACAT 18 V_MTF1_01_M01242 TRANSFAC - 65639831 65639850 7.0E-06 GTGTCCACCATCTCGCAGCC 20 V_OSR1_03_M02784 TRANSFAC + 65639764 65639779 6.0E-06 AGCAACAGTAGCAGCG 16 V_AP2ALPHA_Q6_M01857 TRANSFAC + 65640383 65640393 6.0E-06 CGCCCCCGGCC 11 V_E2A_Q6_01_M02088 TRANSFAC + 65638474 65638486 6.0E-06 GGCCACCTGCGGC 13 V_GAF_Q6_M01209 TRANSFAC + 65640626 65640636 7.0E-06 CAGATTCTCAT 11 V_EBF_Q6_M00977 TRANSFAC - 65638374 65638384 4.0E-06 GTCCCCTGGGA 11 V_TBX15_01_M01263 TRANSFAC + 65638563 65638581 1.0E-05 AGGTCTGAGTTTAAGACGC 19 V_NF1_Q6_01_M00806 TRANSFAC - 65640950 65640966 1.0E-05 TTCATTTTGTGCCAAAA 17 V_COE1_Q6_M01871 TRANSFAC - 65635712 65635725 4.0E-06 TCCCAGGGGGCTTT 14 V_ESE1_01_M01977 TRANSFAC + 65638299 65638308 8.0E-06 ACAGGAAATA 10 V_EBOX_Q6_01_M01034 TRANSFAC + 65641273 65641282 2.0E-06 CCACGTGACC 10 V_PLAG1_02_M01973 TRANSFAC + 65641210 65641225 3.0E-06 CCCCCGCCTGGGGCCC 16 V_AP2_Q6_01_M00915 TRANSFAC - 65641214 65641226 4.0E-06 CGGGCCCCAGGCG 13 V_GKLF_02_M01588 TRANSFAC - 65641139 65641150 1.0E-06 GCCACGCCCTTC 12 V_NERF_Q2_M00531 TRANSFAC + 65641133 65641150 9.0E-06 TCCCAGGAAGGGCGTGGC 18 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC + 65640346 65640361 6.0E-06 CAGCGCCAGGGGGAGG 16 V_CETS1P54_02_M00074 TRANSFAC + 65638297 65638309 2.0E-06 GCACAGGAAATAA 13 V_PPARGRXRA_01_M02262 TRANSFAC + 65637944 65637958 3.0E-06 CTAGGGCAAGGGCCA 15 V_ETS_Q4_M00771 TRANSFAC + 65637988 65637999 1.0E-05 AGCTGCTTCCTG 12 V_ZNF219_01_M01122 TRANSFAC + 65640271 65640282 5.0E-06 CGCCCCCCGCCC 12 V_GC_01_M00255 TRANSFAC + 65639358 65639371 8.0E-06 TGGAGGTGGGGCTG 14 V_GC_01_M00255 TRANSFAC + 65641117 65641130 1.0E-06 TATGGGCGGGGCTG 14 V_SOX7_03_M02807 TRANSFAC + 65641414 65641435 2.0E-06 AAGGTTAAATAATAGCTCTTTA 22 V_STAF_01_M00262 TRANSFAC + 65635656 65635677 6.0E-06 GATTCCCATCATCCCTCAGGGG 22 V_ZBP89_Q4_M01816 TRANSFAC + 65640123 65640132 4.0E-06 CCCTCCCCCA 10 V_OLF1_01_M00261 TRANSFAC - 65635710 65635731 8.0E-06 TACGTCTCCCAGGGGGCTTTGG 22 V_AP2BETA_Q3_M01858 TRANSFAC - 65640169 65640184 3.0E-06 GCCGCGGGCCGCGGGG 16 V_HNF1_Q6_01_M01011 TRANSFAC - 65641413 65641433 1.0E-06 AAGAGCTATTATTTAACCTTC 21 V_EGR1_04_M02848 TRANSFAC - 65639460 65639475 7.0E-06 CTATGAGTGGGACCCA 16 V_HBP1_03_M02762 TRANSFAC + 65640959 65640974 7.0E-06 AAAATGAATGGAAGCC 16 V_NFKAPPAB50_01_M00051 TRANSFAC + 65641204 65641213 4.0E-06 GGGGATCCCC 10 V_NFKAPPAB50_01_M00051 TRANSFAC - 65641204 65641213 4.0E-06 GGGGATCCCC 10 V_KLF7_03_M02773 TRANSFAC - 65641116 65641131 9.0E-06 CCAGCCCCGCCCATAC 16 V_CETS1P54_01_M00032 TRANSFAC + 65638299 65638308 1.0E-05 ACAGGAAATA 10 V_HNF4_DR1_Q3_M00764 TRANSFAC - 65637946 65637958 8.0E-06 TGGCCCTTGCCCT 13 V_PPARA_02_M00518 TRANSFAC - 65640841 65640859 7.0E-06 GACGGTCCTGGGGGTGGAG 19 V_STAT3_03_M01595 TRANSFAC - 65639482 65639497 6.0E-06 CCTTCCAGGAATGCAC 16 V_STAT3_03_M01595 TRANSFAC + 65639485 65639500 9.0E-06 CATTCCTGGAAGGGAA 16 V_MAZR_01_M00491 TRANSFAC + 65638429 65638441 9.0E-06 AGGGGAGGGGCCC 13 V_HIF1_Q3_M00797 TRANSFAC + 65641000 65641013 7.0E-06 TCGGACGTGCGGGA 14 V_MYF6_04_M02885 TRANSFAC - 65639362 65639376 4.0E-06 AGGGACAGCCCCACC 15 V_CNOT3_01_M01253 TRANSFAC - 65640295 65640304 4.0E-06 GGCCGCGCCG 10 V_ZSCAN4_04_M02942 TRANSFAC + 65638457 65638472 3.0E-06 AGTGGCACACAAGCTG 16 V_T3R_Q6_M00963 TRANSFAC + 65638348 65638356 3.0E-06 ACTGTCCTT 9 V_OSR2_03_M02785 TRANSFAC + 65639764 65639779 7.0E-06 AGCAACAGTAGCAGCG 16 V_E47_01_M00002 TRANSFAC - 65638472 65638486 8.0E-06 GCCGCAGGTGGCCCC 15 V_ETS1_B_M00339 TRANSFAC + 65641135 65641149 1.0E-05 CCAGGAAGGGCGTGG 15 V_SREBP_Q3_M00776 TRANSFAC + 65639514 65639525 9.0E-06 GTGGTCACCCTA 12 V_EWSR1FLI1_01_M02252 TRANSFAC - 65640831 65640848 5.0E-06 GGGTGGAGGGCAGGAGGG 18 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 65638278 65638285 1.0E-05 TGTGGTTT 8 V_EKLF_Q5_M01874 TRANSFAC - 65638515 65638524 5.0E-06 CCACACCCTC 10 V_EKLF_Q5_M01874 TRANSFAC + 65640897 65640906 5.0E-06 CCACACCCTC 10 V_HIF1_Q5_M00466 TRANSFAC + 65641001 65641012 5.0E-06 CGGACGTGCGGG 12 V_SP1_Q4_01_M00932 TRANSFAC + 65638428 65638440 9.0E-06 GAGGGGAGGGGCC 13 V_HNF1A_01_M02162 TRANSFAC + 65641416 65641429 7.0E-06 GGTTAAATAATAGC 14 V_ELK1_03_M01163 TRANSFAC + 65639499 65639509 1.0E-05 AACCAGAAGTG 11 V_FEV_01_M02269 TRANSFAC + 65638300 65638307 1.0E-05 CAGGAAAT 8 V_DEC_Q1_M00997 TRANSFAC - 65640147 65640159 8.0E-06 GCCCAAGTGAGTG 13 PPARG_RXRA_MA0065.2 JASPAR + 65637944 65637958 3.0E-06 CTAGGGCAAGGGCCA 15 V_NF1_Q6_M00193 TRANSFAC + 65640950 65640967 6.0E-06 TTTTGGCACAAAATGAAT 18 V_AP2_Q3_M00800 TRANSFAC - 65641209 65641224 5.0E-06 GGCCCCAGGCGGGGGA 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.