Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

GUCY2D Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 3000 guanylate cyclase 2D, membrane (retina-specific) chr17 + 7900987 - 7906487 7905987 Transcription Factor Binding Sites   Download all TFBS in the GUCY2D promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints TBR1_TBX_DBD_monomeric_10_1 SELEX + 7909434 7909443 9.0E-06 AGGTGTGACA 10 Pax4_MA0068.1 JASPAR + 7905296 7905325 1.0E-06 CAATTATATTCATTTTCACAACAACCCTCA 30 SPIB_ETS_DBD_monomeric_14_1 SELEX + 7909405 7909418 4.0E-06 GAAAAGAGGAACCA 14 BARHL2_homeodomain_full_dimeric_16_1 SELEX - 7905296 7905311 6.0E-06 AAAATGAATATAATTG 16 TEAD3_TEA_DBD_dimeric_17_1 SELEX + 7908434 7908450 8.0E-06 TGATTCCTTGAATTCTT 17 Stat3_MA0144.1 JASPAR - 7908459 7908468 1.0E-05 TGCCTGGAAG 10 TEAD1_TEA_full_dimeric_17_1 SELEX + 7908434 7908450 8.0E-06 TGATTCCTTGAATTCTT 17 FOXC1_MA0032.1 JASPAR + 7908367 7908374 7.0E-06 AGTAAGTA 8 SPI1_ETS_full_monomeric_14_1 SELEX + 7905708 7905721 8.0E-06 TGAAAGGGGAAGCT 14 SPI1_ETS_full_monomeric_14_1 SELEX + 7909405 7909418 3.0E-06 GAAAAGAGGAACCA 14 RREB1_MA0073.1 JASPAR - 7905739 7905758 8.0E-06 ACCCTCATCACCACCACCCC 20 V_SPI1_01_M01203 TRANSFAC + 7905708 7905724 1.0E-05 TGAAAGGGGAAGCTGCG 17 V_SPI1_01_M01203 TRANSFAC + 7909405 7909421 4.0E-06 GAAAAGAGGAACCAGTT 17 V_FLI1_Q6_M01208 TRANSFAC - 7905405 7905415 4.0E-06 CAGGAAGTAAT 11 V_MMEF2_Q6_M00405 TRANSFAC - 7905293 7905308 6.0E-06 ATGAATATAATTGCCC 16 V_FOXJ1_04_M02854 TRANSFAC + 7905308 7905322 2.0E-06 TTTTCACAACAACCC 15 V_ZTA_Q2_M00711 TRANSFAC + 7908890 7908902 1.0E-06 TAATTCTGACTCA 13 V_EGR_Q6_M00807 TRANSFAC - 7908449 7908459 3.0E-06 GTGGGGGCGAA 11 V_IRF2_Q6_M01882 TRANSFAC - 7905299 7905314 4.0E-06 GTGAAAATGAATATAA 16 V_POU1F1_Q6_M00744 TRANSFAC - 7905299 7905308 3.0E-06 ATGAATATAA 10 V_TR4_Q2_M01725 TRANSFAC - 7905442 7905452 1.0E-06 CCTGACCTCTG 11 V_PU1_Q4_M01172 TRANSFAC - 7905473 7905491 7.0E-06 TTCTTTCACTTCTCTTCTC 19 V_PU1_Q4_M01172 TRANSFAC - 7909406 7909424 2.0E-06 ACTAACTGGTTCCTCTTTT 19 V_ETS_Q4_M00771 TRANSFAC + 7905404 7905415 7.0E-06 CATTACTTCCTG 12 V_TST1_01_M00133 TRANSFAC - 7908499 7908513 6.0E-06 GATGAATTCGAATGA 15 V_BACH1_01_M00495 TRANSFAC - 7908892 7908906 6.0E-06 GGGATGAGTCAGAAT 15 V_OCT1_02_M00136 TRANSFAC + 7905297 7905311 8.0E-06 AATTATATTCATTTT 15 V_AP1_Q4_M00188 TRANSFAC - 7908421 7908431 1.0E-05 GGTGACTCACA 11 V_JUNDM2_04_M02876 TRANSFAC - 7908419 7908434 6.0E-06 AAGGGTGACTCACACG 16 V_SPIB_01_M01204 TRANSFAC + 7909405 7909421 2.0E-06 GAAAAGAGGAACCAGTT 17 V_TEL2_Q6_M00678 TRANSFAC + 7905406 7905415 1.0E-06 TTACTTCCTG 10 V_RREB1_01_M00257 TRANSFAC - 7905754 7905767 7.0E-06 CCCCACATCACCCT 14 V_AP1_C_M00199 TRANSFAC - 7908895 7908903 3.0E-06 ATGAGTCAG 9 V_PPARA_02_M00518 TRANSFAC + 7905744 7905762 6.0E-06 GGTGGTGATGAGGGTGATG 19 V_AP1_01_M00517 TRANSFAC - 7908893 7908905 0.0E+00 GGATGAGTCAGAA 13 V_TFIII_Q6_M00706 TRANSFAC + 7909453 7909461 6.0E-06 AGAGGGAGG 9 V_TAL1_01_M01591 TRANSFAC - 7905470 7905482 1.0E-05 TTCTCTTCTCTCT 13 V_T3RBETA_Q6_01_M02119 TRANSFAC + 7905435 7905451 9.0E-06 GGAGAAGCAGAGGTCAG 17 V_TITF1_Q3_M00432 TRANSFAC + 7905454 7905463 5.0E-06 AATCAAGTGT 10 V_PIT1_Q6_M00802 TRANSFAC + 7905302 7905319 7.0E-06 TATTCATTTTCACAACAA 18 V_PAX4_04_M00380 TRANSFAC + 7908367 7908396 6.0E-06 AGTAAGTACCACAGCAGTCCTCTCCACTGC 30

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.